RNA–Protein interactions for RNA: ENST00000553474.5

SHMT2-205, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 2 BASIC

Gene SHMT2, Length 1,765 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-205ENST00000553474 ORMDL1Q9P0S3 153 aa8.78□□□□□ -1
SHMT2-205ENST00000553474 IGLV10-54A0A075B6I4 117 aa8.77□□□□□ -1.01
SHMT2-205ENST00000553474 SPAG11BQ08648 103 aa8.76□□□□□ -1.01
SHMT2-205ENST00000553474 HTN3P15516 51 aa8.76□□□□□ -1.01
SHMT2-205ENST00000553474 LYPD5Q6UWN5 251 aa8.76□□□□□ -1.01
SHMT2-205ENST00000553474 NANOS2P60321 138 aaKnown RBP8.74□□□□□ -1.01
SHMT2-205ENST00000553474 Q8N3U1 123 aa8.74□□□□□ -1.01
SHMT2-205ENST00000553474 KLK12Q9UKR0 248 aa8.74□□□□□ -1.01
SHMT2-205ENST00000553474 JMJD7-PLA2G4BH0Y9G9 81 aa8.73□□□□□ -1.01
SHMT2-205ENST00000553474 TMEM256-PLSCR3K7ERE1 68 aa8.73□□□□□ -1.01
SHMT2-205ENST00000553474 ENHOQ6UWT2 76 aa8.73□□□□□ -1.01
SHMT2-205ENST00000553474 KPRPQ5T749 579 aaPredicted RBP8.73□□□□□ -1.01
SHMT2-205ENST00000553474 Q8N814 137 aa8.73□□□□□ -1.01
SHMT2-205ENST00000553474 H3BQ85 93 aa8.72□□□□□ -1.01
SHMT2-205ENST00000553474 GAGE2AQ6NT46 116 aa8.72□□□□□ -1.01
SHMT2-205ENST00000553474 NHLRC4P0CG21 123 aaPredicted RBP8.71□□□□□ -1.01
SHMT2-205ENST00000553474 S100A7L2Q5SY68 101 aa8.71□□□□□ -1.01
SHMT2-205ENST00000553474 UNQ6190/PRO20217Q6UXQ8 127 aa8.71□□□□□ -1.02
SHMT2-205ENST00000553474 C9orf116Q5BN46 136 aaPredicted RBP8.7□□□□□ -1.02
SHMT2-205ENST00000553474 SMCR5Q8TEV8 140 aa8.7□□□□□ -1.02
SHMT2-205ENST00000553474 K7EIL1 84 aa8.69□□□□□ -1.02
SHMT2-205ENST00000553474 IGLV6-57P01721 117 aa8.69□□□□□ -1.02
SHMT2-205ENST00000553474 C14orf132Q9NPU4 83 aa8.68□□□□□ -1.02
SHMT2-205ENST00000553474 PRR3P79522 188 aaKnown RBP8.68□□□□□ -1.02
SHMT2-205ENST00000553474 C6orf99Q4VX62 202 aa8.68□□□□□ -1.02
SHMT2-205ENST00000553474 C10orf25Q5T742 122 aa8.68□□□□□ -1.02
SHMT2-205ENST00000553474 C6orf223Q8N319 242 aa8.68□□□□□ -1.02
SHMT2-205ENST00000553474 LINC00575Q6W349 94 aa8.67□□□□□ -1.02
SHMT2-205ENST00000553474 DNAH3Q8TD57 4116 aa8.66□□□□□ -1.02
SHMT2-205ENST00000553474 NCR3O14931 201 aa8.66□□□□□ -1.02
SHMT2-205ENST00000553474 GHRHP01286 108 aa8.66□□□□□ -1.02
SHMT2-205ENST00000553474 SEC61GP60059 68 aa8.66□□□□□ -1.02
SHMT2-205ENST00000553474 C2orf48Q96LS8 159 aa8.66□□□□□ -1.02
SHMT2-205ENST00000553474 ZNF561-AS1K7EIQ3 104 aa8.66□□□□□ -1.02
SHMT2-205ENST00000553474 CCKP06307 115 aa8.66□□□□□ -1.02
SHMT2-205ENST00000553474 C6orf48Q9UBA6 75 aa8.66□□□□□ -1.02
SHMT2-205ENST00000553474 MEGF8Q7Z7M0 2845 aa8.65□□□□□ -1.02
SHMT2-205ENST00000553474 SLPIP03973 132 aa8.65□□□□□ -1.02
SHMT2-205ENST00000553474 LINC01556Q5JQF7 62 aa8.65□□□□□ -1.02
SHMT2-205ENST00000553474 C9orf129Q5T035 196 aaKnown RBP8.65□□□□□ -1.02
SHMT2-205ENST00000553474 Q6JHZ5 121 aa8.65□□□□□ -1.02
SHMT2-205ENST00000553474 Q6ZTC4 211 aa8.65□□□□□ -1.02
SHMT2-205ENST00000553474 TRBV7-6A0A0J9YX20 115 aa8.64□□□□□ -1.03
SHMT2-205ENST00000553474 hADV29S1A0JD25 119 aa8.64□□□□□ -1.03
SHMT2-205ENST00000553474 WFDC10BQ8IUB3 73 aa8.64□□□□□ -1.03
SHMT2-205ENST00000553474 Q8NDZ9 215 aa8.64□□□□□ -1.03
SHMT2-205ENST00000553474 KRTAP26-1Q6PEX3 210 aa8.63□□□□□ -1.03
SHMT2-205ENST00000553474 FAM236AA0A1B0GUQ0 79 aa8.63□□□□□ -1.03
SHMT2-205ENST00000553474 FAM236BA0A1B0GV22 79 aa8.63□□□□□ -1.03
SHMT2-205ENST00000553474 CAMK2N2Q96S95 79 aa8.63□□□□□ -1.03
SHMT2-205ENST00000553474 RPL18AQ02543 176 aaKnown RBP8.62□□□□□ -1.03
SHMT2-205ENST00000553474 TRAV23DV6A0A075B6W5 121 aa8.61□□□□□ -1.03
SHMT2-205ENST00000553474 ATP5EP2Q5VTU8 51 aa8.61□□□□□ -1.03
SHMT2-205ENST00000553474 C1orf43Q9BWL3 253 aa8.61□□□□□ -1.03
SHMT2-205ENST00000553474 RETNQ9HD89 108 aa8.61□□□□□ -1.03
SHMT2-205ENST00000553474 LINC00846Q9NV44 126 aa8.61□□□□□ -1.03
SHMT2-205ENST00000553474 PDE6GP18545 87 aa8.61□□□□□ -1.03
SHMT2-205ENST00000553474 ESRGQ1W209 222 aa8.61□□□□□ -1.03
SHMT2-205ENST00000553474 C11orf45Q8TAV5 145 aa8.61□□□□□ -1.03
SHMT2-205ENST00000553474 DIRC1Q969H9 104 aa8.61□□□□□ -1.03
SHMT2-205ENST00000553474 LINC00526Q96FQ7 95 aa8.61□□□□□ -1.03
SHMT2-205ENST00000553474 DEFB131BA0A096LNP1 70 aa8.6□□□□□ -1.03
SHMT2-205ENST00000553474 NDUFC2-KCTD14E9PQ53 114 aa8.6□□□□□ -1.03
SHMT2-205ENST00000553474 HIST1H4AP62805 103 aaKnown RBP8.59□□□□□ -1.03
SHMT2-205ENST00000553474 FBN3Q75N90 2809 aa8.59□□□□□ -1.03
SHMT2-205ENST00000553474 LOC110117498A0A087WWA1 95 aa8.58□□□□□ -1.04
SHMT2-205ENST00000553474 TRBV10-3A0A0K0K1G6 114 aa8.58□□□□□ -1.04
SHMT2-205ENST00000553474 M0R378 163 aa8.58□□□□□ -1.04
SHMT2-205ENST00000553474 RBM3P98179 157 aaKnown RBP8.58□□□□□ -1.04
SHMT2-205ENST00000553474 C15orf56Q8N910 161 aa8.58□□□□□ -1.04
SHMT2-205ENST00000553474 CCDC179H3BU77 68 aa8.58□□□□□ -1.04
SHMT2-205ENST00000553474 ZNF73O43830 326 aaPredicted RBP8.58□□□□□ -1.04
SHMT2-205ENST00000553474 DNAH10OSP0CZ25 163 aa8.58□□□□□ -1.04
SHMT2-205ENST00000553474 VPREB1P12018 145 aa8.58□□□□□ -1.04
SHMT2-205ENST00000553474 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP8.58□□□□□ -1.04
SHMT2-205ENST00000553474 J3KT08 172 aa8.57□□□□□ -1.04
SHMT2-205ENST00000553474 ATOX1O00244 68 aa8.57□□□□□ -1.04
SHMT2-205ENST00000553474 ELOF1P60002 83 aaKnown RBP8.56□□□□□ -1.04
SHMT2-205ENST00000553474 HIGD2BQ4VC39 106 aa8.56□□□□□ -1.04
SHMT2-205ENST00000553474 Q6ZRU5 148 aa8.56□□□□□ -1.04
SHMT2-205ENST00000553474 XAGE1AQ9HD64 81 aa8.56□□□□□ -1.04
SHMT2-205ENST00000553474 TENM3Q9P273 2699 aa8.56□□□□□ -1.04
SHMT2-205ENST00000553474 COX7BP24311 80 aa8.56□□□□□ -1.04
SHMT2-205ENST00000553474 RPS28P62857 69 aaKnown RBP8.56□□□□□ -1.04
SHMT2-205ENST00000553474 B9D2Q9BPU9 175 aa8.56□□□□□ -1.04
SHMT2-205ENST00000553474 UQCRQO14949 82 aa8.55□□□□□ -1.04
SHMT2-205ENST00000553474 UBL5Q9BZL1 73 aa8.55□□□□□ -1.04
SHMT2-205ENST00000553474 TRAV10A0A0B4J240 114 aa8.54□□□□□ -1.04
SHMT2-205ENST00000553474 Q6ZQT0 140 aa8.54□□□□□ -1.04
SHMT2-205ENST00000553474 Q6ZQY7 126 aa8.54□□□□□ -1.04
SHMT2-205ENST00000553474 FAM19A5Q7Z5A7 132 aaPredicted RBP8.54□□□□□ -1.04
SHMT2-205ENST00000553474 LAMTOR3Q9UHA4 124 aa8.54□□□□□ -1.04
SHMT2-205ENST00000553474 IGKV2D-24A0A075B6R9 120 aa8.53□□□□□ -1.04
SHMT2-205ENST00000553474 DSCR8Q96T75 97 aa8.53□□□□□ -1.04
SHMT2-205ENST00000553474 PRKDCP78527 4128 aaKnown RBP8.53□□□□□ -1.04
SHMT2-205ENST00000553474 SYCNQ0VAF6 134 aa8.53□□□□□ -1.04
SHMT2-205ENST00000553474 C3orf22Q8N5N4 141 aa8.53□□□□□ -1.04
SHMT2-205ENST00000553474 TM2D3Q9BRN9 247 aa8.53□□□□□ -1.04
SHMT2-205ENST00000553474 TLX1NBP0CAT3 122 aa8.52□□□□□ -1.05
SHMT2-205ENST00000553474 COX7CP15954 63 aa8.5□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 62.8 ms