RNA–Protein interactions for RNA: ENST00000551655.1

VPS29-209, Transcript of VPS29, retromer complex component, humanhuman

TSL 5

Gene VPS29, Length 766 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS29-209ENST00000551655 MRPL54Q6P161 138 aaKnown RBP7.66□□□□□ -1.18
VPS29-209ENST00000551655 PDZD11Q5EBL8 140 aa7.65□□□□□ -1.18
VPS29-209ENST00000551655 SPINK8P0C7L1 97 aa7.64□□□□□ -1.19
VPS29-209ENST00000551655 AKAP14Q86UN6 197 aa7.64□□□□□ -1.19
VPS29-209ENST00000551655 PRELID3AQ96N28 172 aa7.64□□□□□ -1.19
VPS29-209ENST00000551655 TMEM238LA0A1B0GVL6 79 aa7.63□□□□□ -1.19
VPS29-209ENST00000551655 SEC11AP67812 179 aa7.63□□□□□ -1.19
VPS29-209ENST00000551655 RPL24P83731 157 aaKnown RBP7.63□□□□□ -1.19
VPS29-209ENST00000551655 SSBP3-AS1Q7Z2R9 100 aa7.63□□□□□ -1.19
VPS29-209ENST00000551655 TIMM17AQ99595 171 aa7.63□□□□□ -1.19
VPS29-209ENST00000551655 SMIM27A0A1W2PRY6 76 aa7.62□□□□□ -1.19
VPS29-209ENST00000551655 TMEM136Q6ZRR5 245 aa7.62□□□□□ -1.19
VPS29-209ENST00000551655 ORMDL3Q8N138 153 aa7.62□□□□□ -1.19
VPS29-209ENST00000551655 ATP5LO75964 103 aa7.61□□□□□ -1.19
VPS29-209ENST00000551655 PPBPP02775 128 aa7.61□□□□□ -1.19
VPS29-209ENST00000551655 A0A1B0GW15 77 aa7.6□□□□□ -1.19
VPS29-209ENST00000551655 A0A1B0GXF2 115 aa7.6□□□□□ -1.19
VPS29-209ENST00000551655 F8W036 122 aa7.6□□□□□ -1.19
VPS29-209ENST00000551655 ERC2-IT1O76042 136 aa7.6□□□□□ -1.19
VPS29-209ENST00000551655 Q6Q795 121 aa7.6□□□□□ -1.19
VPS29-209ENST00000551655 IGLV6-57P01721 117 aa7.59□□□□□ -1.19
VPS29-209ENST00000551655 NPSP0C0P6 89 aa7.59□□□□□ -1.19
VPS29-209ENST00000551655 Q8N8P6 123 aa7.58□□□□□ -1.2
VPS29-209ENST00000551655 ZNF625Q96I27 306 aaPredicted RBP7.58□□□□□ -1.2
VPS29-209ENST00000551655 ERG28Q9UKR5 140 aa7.58□□□□□ -1.2
VPS29-209ENST00000551655 IGLV5-45A0A087WSX0 123 aa7.57□□□□□ -1.2
VPS29-209ENST00000551655 PRSS47A8MTI9 375 aa7.57□□□□□ -1.2
VPS29-209ENST00000551655 MAP1LC3AQ9H492 121 aa7.57□□□□□ -1.2
VPS29-209ENST00000551655 TINCRA0A1B0GVN0 87 aa7.56□□□□□ -1.2
VPS29-209ENST00000551655 RPL23P62829 140 aaKnown RBP7.56□□□□□ -1.2
VPS29-209ENST00000551655 C9orf153Q5TBE3 101 aa7.56□□□□□ -1.2
VPS29-209ENST00000551655 NEBP20929 6669 aa7.55□□□□□ -1.2
VPS29-209ENST00000551655 PRYO14603 147 aa7.55□□□□□ -1.2
VPS29-209ENST00000551655 SPRR1AP35321 89 aa7.55□□□□□ -1.2
VPS29-209ENST00000551655 RPL37P61927 97 aaKnown RBP7.55□□□□□ -1.2
VPS29-209ENST00000551655 ADIRFQ15847 76 aa7.55□□□□□ -1.2
VPS29-209ENST00000551655 ORMDL2Q53FV1 153 aa7.55□□□□□ -1.2
VPS29-209ENST00000551655 ETDCA0A1B0GVM5 59 aa7.54□□□□□ -1.2
VPS29-209ENST00000551655 S100A8P05109 93 aa7.54□□□□□ -1.2
VPS29-209ENST00000551655 SRP19P09132 144 aaKnown RBP7.54□□□□□ -1.2
VPS29-209ENST00000551655 HRCT1Q6UXD1 115 aa7.54□□□□□ -1.2
VPS29-209ENST00000551655 ADCYAP1P18509 176 aa7.53□□□□□ -1.2
VPS29-209ENST00000551655 PAPPA-AS1Q5QFB9 102 aa7.53□□□□□ -1.2
VPS29-209ENST00000551655 NCR3O14931 201 aa7.52□□□□□ -1.21
VPS29-209ENST00000551655 MT2AP02795 61 aa7.52□□□□□ -1.21
VPS29-209ENST00000551655 KRTAP6-3Q3LI67 103 aa7.52□□□□□ -1.21
VPS29-209ENST00000551655 SLC51BQ86UW2 128 aa7.5□□□□□ -1.21
VPS29-209ENST00000551655 TOMM6Q96B49 74 aa7.5□□□□□ -1.21
VPS29-209ENST00000551655 KCNQ1DNQ9H478 68 aa7.5□□□□□ -1.21
VPS29-209ENST00000551655 A0A0U1RRA0 63 aa7.49□□□□□ -1.21
VPS29-209ENST00000551655 B5MCH6 92 aa7.49□□□□□ -1.21
VPS29-209ENST00000551655 SCGB3A1Q96QR1 104 aa7.49□□□□□ -1.21
VPS29-209ENST00000551655 Q9BRP9 147 aa7.49□□□□□ -1.21
VPS29-209ENST00000551655 MT1FP04733 61 aa7.48□□□□□ -1.21
VPS29-209ENST00000551655 COX17Q14061 63 aa7.48□□□□□ -1.21
VPS29-209ENST00000551655 ALKAL2Q6UX46 152 aa7.48□□□□□ -1.21
VPS29-209ENST00000551655 CST9LQ9H4G1 147 aa7.48□□□□□ -1.21
VPS29-209ENST00000551655 LAMTOR2Q9Y2Q5 125 aa7.48□□□□□ -1.21
VPS29-209ENST00000551655 IGLV5-39A0A0G2JS06 123 aa7.47□□□□□ -1.21
VPS29-209ENST00000551655 BLOC1S1P78537 153 aa7.47□□□□□ -1.21
VPS29-209ENST00000551655 ERASQ7Z444 233 aa7.47□□□□□ -1.21
VPS29-209ENST00000551655 LIMD2Q9BT23 127 aa7.47□□□□□ -1.21
VPS29-209ENST00000551655 CHTOPQ9Y3Y2 248 aaKnown RBP7.47□□□□□ -1.21
VPS29-209ENST00000551655 TRBV10-3A0A0K0K1G6 114 aa7.46□□□□□ -1.22
VPS29-209ENST00000551655 RGS21Q2M5E4 152 aa7.46□□□□□ -1.22
VPS29-209ENST00000551655 KRTAP9-3Q9BYQ3 159 aa7.46□□□□□ -1.22
VPS29-209ENST00000551655 H3BRM9 83 aa7.45□□□□□ -1.22
VPS29-209ENST00000551655 LINC00158P58513 81 aa7.45□□□□□ -1.22
VPS29-209ENST00000551655 KRTAP4-11Q9BYQ6 195 aa7.45□□□□□ -1.22
VPS29-209ENST00000551655 K7EMI3 77 aa7.44□□□□□ -1.22
VPS29-209ENST00000551655 KIAA1644Q3SXP7 199 aa7.44□□□□□ -1.22
VPS29-209ENST00000551655 NAT8Q9UHE5 227 aa7.44□□□□□ -1.22
VPS29-209ENST00000551655 C9JQL5 133 aa7.43□□□□□ -1.22
VPS29-209ENST00000551655 ATP5L2Q7Z4Y8 100 aa7.43□□□□□ -1.22
VPS29-209ENST00000551655 BOD1L2Q8IYS8 172 aa7.43□□□□□ -1.22
VPS29-209ENST00000551655 ST20-AS1Q8NBB2 130 aa7.43□□□□□ -1.22
VPS29-209ENST00000551655 NXT2Q9NPJ8 142 aaKnown RBP7.43□□□□□ -1.22
VPS29-209ENST00000551655 KRTAP19-6Q3LI70 58 aa7.42□□□□□ -1.22
VPS29-209ENST00000551655 TRAV9-1A0A075B6T8 112 aa7.41□□□□□ -1.22
VPS29-209ENST00000551655 ZNF22P17026 224 aaPredicted RBP7.41□□□□□ -1.22
VPS29-209ENST00000551655 PMVKQ15126 192 aa7.41□□□□□ -1.22
VPS29-209ENST00000551655 H7C2G1 150 aa7.4□□□□□ -1.22
VPS29-209ENST00000551655 Q6ZRX8 168 aa7.39□□□□□ -1.23
VPS29-209ENST00000551655 IGLC3P0DOY3 106 aa7.38□□□□□ -1.23
VPS29-209ENST00000551655 G0S2P27469 103 aa7.38□□□□□ -1.23
VPS29-209ENST00000551655 KRTAP10-10P60014 251 aa7.37□□□□□ -1.23
VPS29-209ENST00000551655 SMIM13P0DJ93 91 aa7.36□□□□□ -1.23
VPS29-209ENST00000551655 C1orf195Q5TG92 126 aa7.36□□□□□ -1.23
VPS29-209ENST00000551655 LINC00846Q9NV44 126 aa7.36□□□□□ -1.23
VPS29-209ENST00000551655 MUC12Q9UKN1 5478 aa7.35□□□□□ -1.23
VPS29-209ENST00000551655 LCE4AQ5TA78 99 aa7.34□□□□□ -1.23
VPS29-209ENST00000551655 NDUFA6P56556 154 aa7.33□□□□□ -1.24
VPS29-209ENST00000551655 KRTAP20-1Q3LI63 56 aa7.33□□□□□ -1.24
VPS29-209ENST00000551655 MIR7-3HGQ8N6C7 128 aa7.33□□□□□ -1.24
VPS29-209ENST00000551655 DDTP30046 118 aa7.32□□□□□ -1.24
VPS29-209ENST00000551655 C20orf202A1L168 122 aa7.31□□□□□ -1.24
VPS29-209ENST00000551655 C11orf86A6NJI1 115 aa7.31□□□□□ -1.24
VPS29-209ENST00000551655 ATP6V1G1O75348 118 aa7.31□□□□□ -1.24
VPS29-209ENST00000551655 S100A12P80511 92 aa7.31□□□□□ -1.24
VPS29-209ENST00000551655 SFTA2Q6UW10 78 aa7.3□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 11.7 ms