RNA–Protein interactions for RNA: ENST00000551111.1

PRPF40B-212, Transcript of pre-mRNA processing factor 40 homolog B, humanhuman

TSL 5

Gene PRPF40B, Length 1,061 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40B-212ENST00000551111 GHRHP01286 108 aa6.62□□□□□ -1.35
PRPF40B-212ENST00000551111 C11orf86A6NJI1 115 aa6.61□□□□□ -1.35
PRPF40B-212ENST00000551111 TPRXLQ17RH7 258 aa6.61□□□□□ -1.35
PRPF40B-212ENST00000551111 CDIP1Q9H305 208 aa6.61□□□□□ -1.35
PRPF40B-212ENST00000551111 SMCO4Q9NRQ5 59 aa6.61□□□□□ -1.35
PRPF40B-212ENST00000551111 LINC01549A6NIU2 74 aa6.59□□□□□ -1.35
PRPF40B-212ENST00000551111 CBLN2Q8IUK8 224 aa6.59□□□□□ -1.35
PRPF40B-212ENST00000551111 C18orf32Q8TCD1 76 aa6.59□□□□□ -1.35
PRPF40B-212ENST00000551111 HIGD2AQ9BW72 106 aa6.59□□□□□ -1.35
PRPF40B-212ENST00000551111 A0A0U1RRA0 63 aa6.58□□□□□ -1.36
PRPF40B-212ENST00000551111 S100PP25815 95 aa6.58□□□□□ -1.36
PRPF40B-212ENST00000551111 UQCC3Q6UW78 93 aa6.58□□□□□ -1.36
PRPF40B-212ENST00000551111 SEC11CQ9BY50 192 aa6.58□□□□□ -1.36
PRPF40B-212ENST00000551111 PPDPFQ9H3Y8 114 aa6.58□□□□□ -1.36
PRPF40B-212ENST00000551111 LINC00614P0C842 121 aa6.57□□□□□ -1.36
PRPF40B-212ENST00000551111 RPL24P83731 157 aaKnown RBP6.57□□□□□ -1.36
PRPF40B-212ENST00000551111 COX17Q14061 63 aa6.57□□□□□ -1.36
PRPF40B-212ENST00000551111 TMEM170BQ5T4T1 132 aa6.57□□□□□ -1.36
PRPF40B-212ENST00000551111 BAGE3Q86Y29 109 aa6.57□□□□□ -1.36
PRPF40B-212ENST00000551111 SPRR4Q96PI1 79 aa6.57□□□□□ -1.36
PRPF40B-212ENST00000551111 DAND5Q8N907 189 aa6.56□□□□□ -1.36
PRPF40B-212ENST00000551111 HBDP02042 147 aa6.55□□□□□ -1.36
PRPF40B-212ENST00000551111 LINC00158P58513 81 aa6.55□□□□□ -1.36
PRPF40B-212ENST00000551111 C10orf91Q5T1B1 145 aa6.55□□□□□ -1.36
PRPF40B-212ENST00000551111 KRTAP4-1Q9BYQ7 146 aa6.55□□□□□ -1.36
PRPF40B-212ENST00000551111 RPS10P5Q9NQ39 176 aa6.55□□□□□ -1.36
PRPF40B-212ENST00000551111 COX19Q49B96 90 aa6.54□□□□□ -1.36
PRPF40B-212ENST00000551111 COMMD7Q86VX2 200 aa6.54□□□□□ -1.36
PRPF40B-212ENST00000551111 TRAPPC1Q9Y5R8 145 aa6.54□□□□□ -1.36
PRPF40B-212ENST00000551111 KRTAP9-6A0A140TA67 174 aa6.53□□□□□ -1.36
PRPF40B-212ENST00000551111 TMEM238LA0A1B0GVL6 79 aa6.53□□□□□ -1.36
PRPF40B-212ENST00000551111 SMIM13P0DJ93 91 aa6.53□□□□□ -1.36
PRPF40B-212ENST00000551111 LORP23490 312 aaPredicted RBP6.53□□□□□ -1.36
PRPF40B-212ENST00000551111 TMEM223A0PJW6 202 aa6.52□□□□□ -1.37
PRPF40B-212ENST00000551111 KRTAP4-16G5E9R7 235 aaPredicted RBP6.52□□□□□ -1.37
PRPF40B-212ENST00000551111 NCR3O14931 201 aa6.52□□□□□ -1.37
PRPF40B-212ENST00000551111 KRTAP13-3Q3SY46 172 aa6.52□□□□□ -1.37
PRPF40B-212ENST00000551111 Q8NBF4 154 aa6.52□□□□□ -1.37
PRPF40B-212ENST00000551111 SMCR5Q8TEV8 140 aa6.52□□□□□ -1.37
PRPF40B-212ENST00000551111 CHTOPQ9Y3Y2 248 aaKnown RBP6.52□□□□□ -1.37
PRPF40B-212ENST00000551111 CTAG1AP78358 180 aa6.51□□□□□ -1.37
PRPF40B-212ENST00000551111 RHEBQ15382 184 aa6.51□□□□□ -1.37
PRPF40B-212ENST00000551111 BOD1L2Q8IYS8 172 aa6.51□□□□□ -1.37
PRPF40B-212ENST00000551111 SPRR1AP35321 89 aa6.5□□□□□ -1.37
PRPF40B-212ENST00000551111 SPAG11AQ6PDA7 123 aa6.5□□□□□ -1.37
PRPF40B-212ENST00000551111 TRBV10-3A0A0K0K1G6 114 aa6.49□□□□□ -1.37
PRPF40B-212ENST00000551111 ERC2-IT1O76042 136 aa6.49□□□□□ -1.37
PRPF40B-212ENST00000551111 MIR7-3HGQ8N6C7 128 aa6.49□□□□□ -1.37
PRPF40B-212ENST00000551111 KCNQ1DNQ9H478 68 aa6.49□□□□□ -1.37
PRPF40B-212ENST00000551111 PRYO14603 147 aa6.48□□□□□ -1.37
PRPF40B-212ENST00000551111 ASB16-AS1Q495Z4 193 aa6.47□□□□□ -1.37
PRPF40B-212ENST00000551111 SFTA2Q6UW10 78 aa6.47□□□□□ -1.37
PRPF40B-212ENST00000551111 FP248Q71RG6 208 aaPredicted RBP6.47□□□□□ -1.37
PRPF40B-212ENST00000551111 LINC00337Q8N6G1 96 aa6.47□□□□□ -1.37
PRPF40B-212ENST00000551111 IFI27L1Q96BM0 104 aa6.47□□□□□ -1.37
PRPF40B-212ENST00000551111 TRAV12-1A0A0B4J245 112 aa6.46□□□□□ -1.38
PRPF40B-212ENST00000551111 TSPEAR-AS2P59090 65 aa6.46□□□□□ -1.38
PRPF40B-212ENST00000551111 LINC00483Q53H64 154 aa6.46□□□□□ -1.38
PRPF40B-212ENST00000551111 MEIG1Q5JSS6 88 aa6.46□□□□□ -1.38
PRPF40B-212ENST00000551111 GAGE2AQ6NT46 116 aa6.46□□□□□ -1.38
PRPF40B-212ENST00000551111 FAM19A2Q8N3H0 131 aa6.46□□□□□ -1.38
PRPF40B-212ENST00000551111 ETDCA0A1B0GVM5 59 aa6.45□□□□□ -1.38
PRPF40B-212ENST00000551111 B5MCH6 92 aa6.45□□□□□ -1.38
PRPF40B-212ENST00000551111 YPEL4Q96NS1 127 aa6.45□□□□□ -1.38
PRPF40B-212ENST00000551111 Q9BRP9 147 aa6.45□□□□□ -1.38
PRPF40B-212ENST00000551111 NDUFA12Q9UI09 145 aa6.45□□□□□ -1.38
PRPF40B-212ENST00000551111 ZNF706Q9Y5V0 76 aaPredicted RBP6.45□□□□□ -1.38
PRPF40B-212ENST00000551111 IGLV9-49A0A0B4J1Y8 123 aa6.44□□□□□ -1.38
PRPF40B-212ENST00000551111 ATP6V1G1O75348 118 aa6.44□□□□□ -1.38
PRPF40B-212ENST00000551111 APOC3P02656 99 aa6.44□□□□□ -1.38
PRPF40B-212ENST00000551111 MOBPQ13875 183 aa6.44□□□□□ -1.38
PRPF40B-212ENST00000551111 Q8N377 158 aa6.44□□□□□ -1.38
PRPF40B-212ENST00000551111 SPINK1P00995 79 aa6.43□□□□□ -1.38
PRPF40B-212ENST00000551111 H0Y8G0 127 aa6.42□□□□□ -1.38
PRPF40B-212ENST00000551111 EIF4EBP3O60516 100 aaPredicted RBP6.42□□□□□ -1.38
PRPF40B-212ENST00000551111 CHCHD1Q96BP2 118 aaKnown RBP6.42□□□□□ -1.38
PRPF40B-212ENST00000551111 LINC00310P59036 64 aa6.41□□□□□ -1.38
PRPF40B-212ENST00000551111 HERV-K104P63124 156 aa6.41□□□□□ -1.38
PRPF40B-212ENST00000551111 LOC107984156A0A0G2JMH3 177 aa6.4□□□□□ -1.38
PRPF40B-212ENST00000551111 MYMXA0A1B0GTQ4 84 aa6.4□□□□□ -1.38
PRPF40B-212ENST00000551111 DDTP30046 118 aa6.4□□□□□ -1.38
PRPF40B-212ENST00000551111 ARL17AQ8IVW1 177 aa6.4□□□□□ -1.38
PRPF40B-212ENST00000551111 Q6ZRX8 168 aa6.39□□□□□ -1.39
PRPF40B-212ENST00000551111 PMCHL2Q9BQD1 86 aa6.39□□□□□ -1.39
PRPF40B-212ENST00000551111 LEPROTO15243 131 aa6.38□□□□□ -1.39
PRPF40B-212ENST00000551111 SNAPINO95295 136 aa6.38□□□□□ -1.39
PRPF40B-212ENST00000551111 LINC01547P58512 204 aaPredicted RBP6.38□□□□□ -1.39
PRPF40B-212ENST00000551111 SOSTDC1Q6X4U4 206 aa6.38□□□□□ -1.39
PRPF40B-212ENST00000551111 SSBP3-AS1Q7Z2R9 100 aa6.38□□□□□ -1.39
PRPF40B-212ENST00000551111 ST20-AS1Q8NBB2 130 aa6.38□□□□□ -1.39
PRPF40B-212ENST00000551111 TRBV10-2A0A0K0K1G8 114 aa6.37□□□□□ -1.39
PRPF40B-212ENST00000551111 HSBP1O75506 76 aa6.37□□□□□ -1.39
PRPF40B-212ENST00000551111 SEC61BP60468 96 aaKnown RBP6.37□□□□□ -1.39
PRPF40B-212ENST00000551111 KRTAP19-2Q3LHN2 52 aa6.37□□□□□ -1.39
PRPF40B-212ENST00000551111 XP32Q5T750 250 aa6.37□□□□□ -1.39
PRPF40B-212ENST00000551111 J3QQQ9 107 aa6.36□□□□□ -1.39
PRPF40B-212ENST00000551111 IGLV6-57P01721 117 aa6.36□□□□□ -1.39
PRPF40B-212ENST00000551111 NPC2P61916 151 aa6.36□□□□□ -1.39
PRPF40B-212ENST00000551111 ADAMTSL4-AS1Q5T5F5 129 aa6.36□□□□□ -1.39
PRPF40B-212ENST00000551111 SVBPQ8N300 66 aa6.36□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 55.9 ms