RNA–Protein interactions for RNA: ENST00000550376.5

PRDM4-205, Transcript of PR/SET domain 4, humanhuman

TSL 1 (best)

Gene PRDM4, Length 2,591 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRDM4-205ENST00000550376 A0A1B0GV72 72 aa13.92□□□□□ -0.18
PRDM4-205ENST00000550376 MEGF8Q7Z7M0 2845 aa13.92□□□□□ -0.18
PRDM4-205ENST00000550376 TEX49A0A1B0GTD5 131 aa13.92□□□□□ -0.18
PRDM4-205ENST00000550376 DNAH10OSP0CZ25 163 aa13.92□□□□□ -0.18
PRDM4-205ENST00000550376 RPL28P46779 137 aaKnown RBP13.92□□□□□ -0.18
PRDM4-205ENST00000550376 CAMK2N2Q96S95 79 aa13.92□□□□□ -0.18
PRDM4-205ENST00000550376 CASC10Q5T4H9 136 aa13.91□□□□□ -0.18
PRDM4-205ENST00000550376 PRKDCP78527 4128 aaKnown RBP13.9□□□□□ -0.18
PRDM4-205ENST00000550376 Q6ZRU5 148 aa13.9□□□□□ -0.18
PRDM4-205ENST00000550376 DNAH7Q8WXX0 4024 aa13.89□□□□□ -0.19
PRDM4-205ENST00000550376 A0A087WYN8 130 aa13.88□□□□□ -0.19
PRDM4-205ENST00000550376 DNAH10Q8IVF4 4471 aa13.88□□□□□ -0.19
PRDM4-205ENST00000550376 PPDPFLQ8WWR9 84 aa13.88□□□□□ -0.19
PRDM4-205ENST00000550376 DNAH1Q9P2D7 4330 aa13.88□□□□□ -0.19
PRDM4-205ENST00000550376 LECT2O14960 151 aa13.86□□□□□ -0.19
PRDM4-205ENST00000550376 RPL18AQ02543 176 aaKnown RBP13.83□□□□□ -0.19
PRDM4-205ENST00000550376 GAGE2EQ4V326 116 aa13.83□□□□□ -0.19
PRDM4-205ENST00000550376 B9D2Q9BPU9 175 aa13.83□□□□□ -0.19
PRDM4-205ENST00000550376 GAGE2DQ9UEU5 116 aa13.83□□□□□ -0.19
PRDM4-205ENST00000550376 PLECQ15149 4684 aaKnown RBP13.82□□□□□ -0.2
PRDM4-205ENST00000550376 GVQW2A0A096LPI5 108 aaPredicted RBP13.81□□□□□ -0.2
PRDM4-205ENST00000550376 NDUFC2O95298 119 aa13.81□□□□□ -0.2
PRDM4-205ENST00000550376 SLPIP03973 132 aa13.81□□□□□ -0.2
PRDM4-205ENST00000550376 S100A7L2Q5SY68 101 aa13.8□□□□□ -0.2
PRDM4-205ENST00000550376 BAALC-AS2P0C853 105 aa13.8□□□□□ -0.2
PRDM4-205ENST00000550376 CDIP1Q9H305 208 aa13.8□□□□□ -0.2
PRDM4-205ENST00000550376 H3BT86 120 aa13.79□□□□□ -0.2
PRDM4-205ENST00000550376 M0QXV9 152 aa13.78□□□□□ -0.2
PRDM4-205ENST00000550376 KRTAP1-5Q9BYS1 174 aa13.78□□□□□ -0.2
PRDM4-205ENST00000550376 TMEM126AQ9H061 195 aa13.78□□□□□ -0.2
PRDM4-205ENST00000550376 TRACP01848 142 aa13.78□□□□□ -0.2
PRDM4-205ENST00000550376 MT-ATP8P03928 68 aa13.77□□□□□ -0.21
PRDM4-205ENST00000550376 Q6ZRP5 223 aa13.77□□□□□ -0.21
PRDM4-205ENST00000550376 C22orf24Q9Y442 160 aa13.77□□□□□ -0.21
PRDM4-205ENST00000550376 USP17L23D6RBM5 183 aa13.77□□□□□ -0.21
PRDM4-205ENST00000550376 C6orf99Q4VX62 202 aa13.77□□□□□ -0.21
PRDM4-205ENST00000550376 SYCNQ0VAF6 134 aa13.76□□□□□ -0.21
PRDM4-205ENST00000550376 C2orf48Q96LS8 159 aa13.75□□□□□ -0.21
PRDM4-205ENST00000550376 H0YGX0 51 aa13.74□□□□□ -0.21
PRDM4-205ENST00000550376 LINC01600Q96MT4 127 aa13.74□□□□□ -0.21
PRDM4-205ENST00000550376 APLNQ9ULZ1 77 aa13.74□□□□□ -0.21
PRDM4-205ENST00000550376 TRBV10-3A0A0K0K1G6 114 aa13.73□□□□□ -0.21
PRDM4-205ENST00000550376 NDUFC2-KCTD14E9PQ53 114 aa13.73□□□□□ -0.21
PRDM4-205ENST00000550376 DNAL4O96015 105 aa13.73□□□□□ -0.21
PRDM4-205ENST00000550376 XGP55808 180 aa13.73□□□□□ -0.21
PRDM4-205ENST00000550376 C9orf129Q5T035 196 aaKnown RBP13.73□□□□□ -0.21
PRDM4-205ENST00000550376 UBE2DNLQ8IWF7 75 aa13.73□□□□□ -0.21
PRDM4-205ENST00000550376 UPK3BQ9BT76 320 aa13.73□□□□□ -0.21
PRDM4-205ENST00000550376 STARD9Q9P2P6 4700 aa13.71□□□□□ -0.21
PRDM4-205ENST00000550376 DYNC2H1Q8NCM8 4307 aaKnown RBP13.71□□□□□ -0.21
PRDM4-205ENST00000550376 IGLV6-57P01721 117 aa13.69□□□□□ -0.22
PRDM4-205ENST00000550376 SVIPQ8NHG7 77 aa13.69□□□□□ -0.22
PRDM4-205ENST00000550376 VPREB1P12018 145 aa13.68□□□□□ -0.22
PRDM4-205ENST00000550376 MUC7Q8TAX7 377 aa13.68□□□□□ -0.22
PRDM4-205ENST00000550376 TGP01266 2768 aa13.67□□□□□ -0.22
PRDM4-205ENST00000550376 Q8N814 137 aa13.65□□□□□ -0.22
PRDM4-205ENST00000550376 SERTAD4-AS1Q5TG53 156 aa13.64□□□□□ -0.23
PRDM4-205ENST00000550376 FAM168BA1KXE4 195 aa13.63□□□□□ -0.23
PRDM4-205ENST00000550376 RMI2Q96E14 147 aa13.63□□□□□ -0.23
PRDM4-205ENST00000550376 TRAV23DV6A0A075B6W5 121 aa13.62□□□□□ -0.23
PRDM4-205ENST00000550376 GAGE2BQ13066 116 aa13.61□□□□□ -0.23
PRDM4-205ENST00000550376 FBN3Q75N90 2809 aa13.6□□□□□ -0.23
PRDM4-205ENST00000550376 PSCAO43653 123 aa13.59□□□□□ -0.23
PRDM4-205ENST00000550376 LINC00575Q6W349 94 aa13.59□□□□□ -0.23
PRDM4-205ENST00000550376 NHLRC4P0CG21 123 aaPredicted RBP13.59□□□□□ -0.23
PRDM4-205ENST00000550376 ORMDL1Q9P0S3 153 aa13.59□□□□□ -0.23
PRDM4-205ENST00000550376 ZNF73O43830 326 aaPredicted RBP13.58□□□□□ -0.24
PRDM4-205ENST00000550376 C14orf132Q9NPU4 83 aa13.58□□□□□ -0.24
PRDM4-205ENST00000550376 M0R378 163 aa13.58□□□□□ -0.24
PRDM4-205ENST00000550376 ANAPC13Q9BS18 74 aa13.57□□□□□ -0.24
PRDM4-205ENST00000550376 IGLV2-33A0A075B6J2 118 aaPredicted RBP13.56□□□□□ -0.24
PRDM4-205ENST00000550376 M0R2N4 97 aa13.55□□□□□ -0.24
PRDM4-205ENST00000550376 DIRC1Q969H9 104 aa13.55□□□□□ -0.24
PRDM4-205ENST00000550376 hADV29S1A0JD25 119 aa13.55□□□□□ -0.24
PRDM4-205ENST00000550376 RPL37AP8A6NKH3 93 aa13.55□□□□□ -0.24
PRDM4-205ENST00000550376 F8WDY8 70 aa13.55□□□□□ -0.24
PRDM4-205ENST00000550376 SS18L2Q9UHA2 77 aa13.54□□□□□ -0.24
PRDM4-205ENST00000550376 NUPR2A6NF83 97 aa13.53□□□□□ -0.24
PRDM4-205ENST00000550376 KRTAP7-1Q8IUC3 87 aa13.53□□□□□ -0.24
PRDM4-205ENST00000550376 NKAPP1Q8N9T2 125 aa13.53□□□□□ -0.24
PRDM4-205ENST00000550376 GAGE2AQ6NT46 116 aa13.53□□□□□ -0.24
PRDM4-205ENST00000550376 C7orf33Q8WU49 177 aa13.53□□□□□ -0.24
PRDM4-205ENST00000550376 LINC00167Q96N53 147 aa13.53□□□□□ -0.24
PRDM4-205ENST00000550376 TTC32Q5I0X7 151 aa13.52□□□□□ -0.24
PRDM4-205ENST00000550376 Q6ZQY7 126 aa13.51□□□□□ -0.25
PRDM4-205ENST00000550376 KMT2AQ03164 3969 aa13.5□□□□□ -0.25
PRDM4-205ENST00000550376 TLX1NBP0CAT3 122 aa13.5□□□□□ -0.25
PRDM4-205ENST00000550376 FAM19A5Q7Z5A7 132 aaPredicted RBP13.5□□□□□ -0.25
PRDM4-205ENST00000550376 COX7BP24311 80 aa13.5□□□□□ -0.25
PRDM4-205ENST00000550376 IGKV2-24A0A0C4DH68 120 aa13.49□□□□□ -0.25
PRDM4-205ENST00000550376 VPS13DQ5THJ4 4388 aa13.49□□□□□ -0.25
PRDM4-205ENST00000550376 A0A1B0GX51 115 aa13.48□□□□□ -0.25
PRDM4-205ENST00000550376 B5MCH6 92 aa13.48□□□□□ -0.25
PRDM4-205ENST00000550376 NBDYA0A0U1RRE5 68 aa13.47□□□□□ -0.25
PRDM4-205ENST00000550376 ELOF1P60002 83 aaKnown RBP13.46□□□□□ -0.25
PRDM4-205ENST00000550376 TMEM256-PLSCR3K7ERE1 68 aa13.46□□□□□ -0.26
PRDM4-205ENST00000550376 SNCGO76070 127 aa13.46□□□□□ -0.26
PRDM4-205ENST00000550376 INAFM2P0DMQ5 153 aa13.46□□□□□ -0.26
PRDM4-205ENST00000550376 SMCR5Q8TEV8 140 aa13.46□□□□□ -0.26
PRDM4-205ENST00000550376 OBSCN-AS1Q96MR7 158 aa13.46□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 69.2 ms