RNA–Protein interactions for RNA: ENST00000547259.1

HDAC7-226, Transcript of histone deacetylase 7, humanhuman

TSL 3

Gene HDAC7, Length 569 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC7-226ENST00000547259 SCGB1D4Q6XE38 83 aa7.7□□□□□ -1.18
HDAC7-226ENST00000547259 GAGE2DQ9UEU5 116 aa7.7□□□□□ -1.18
HDAC7-226ENST00000547259 CHTF8P0CG12 524 aa7.69□□□□□ -1.18
HDAC7-226ENST00000547259 PTTG1IPP53801 180 aa7.69□□□□□ -1.18
HDAC7-226ENST00000547259 CIRBPQ14011 172 aaKnown RBP7.69□□□□□ -1.18
HDAC7-226ENST00000547259 Q6ZRP5 223 aa7.69□□□□□ -1.18
HDAC7-226ENST00000547259 COX8AP10176 69 aa7.68□□□□□ -1.18
HDAC7-226ENST00000547259 C14orf144Q96I85 54 aa7.68□□□□□ -1.18
HDAC7-226ENST00000547259 BOD1L2Q8IYS8 172 aa7.67□□□□□ -1.18
HDAC7-226ENST00000547259 CIRBP-AS1Q8TBR5 109 aa7.67□□□□□ -1.18
HDAC7-226ENST00000547259 XAGE1AQ9HD64 81 aa7.67□□□□□ -1.18
HDAC7-226ENST00000547259 LINC00474Q9P2X8 69 aa7.67□□□□□ -1.18
HDAC7-226ENST00000547259 TP73-AS1Q9UF72 201 aa7.67□□□□□ -1.18
HDAC7-226ENST00000547259 TMEM238C9JI98 176 aa7.66□□□□□ -1.18
HDAC7-226ENST00000547259 TIMM17BO60830 172 aa7.66□□□□□ -1.18
HDAC7-226ENST00000547259 SLC25A34Q6PIV7 304 aa7.66□□□□□ -1.18
HDAC7-226ENST00000547259 MIR7-3HGQ8N6C7 128 aa7.66□□□□□ -1.18
HDAC7-226ENST00000547259 SPACA4Q8TDM5 124 aa7.66□□□□□ -1.18
HDAC7-226ENST00000547259 DPH3Q96FX2 82 aa7.66□□□□□ -1.18
HDAC7-226ENST00000547259 PLA2G2DQ9UNK4 145 aa7.66□□□□□ -1.18
HDAC7-226ENST00000547259 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP7.66□□□□□ -1.18
HDAC7-226ENST00000547259 PANO1I0J062 215 aa7.65□□□□□ -1.18
HDAC7-226ENST00000547259 DLEU1O43261 78 aa7.65□□□□□ -1.18
HDAC7-226ENST00000547259 DAND5Q8N907 189 aa7.65□□□□□ -1.18
HDAC7-226ENST00000547259 SND1-IT1Q9HBX3 110 aa7.65□□□□□ -1.18
HDAC7-226ENST00000547259 LRP1Q07954 4544 aaKnown RBP7.64□□□□□ -1.19
HDAC7-226ENST00000547259 C9orf129Q5T035 196 aaKnown RBP7.64□□□□□ -1.19
HDAC7-226ENST00000547259 C12orf57Q99622 126 aa7.64□□□□□ -1.19
HDAC7-226ENST00000547259 RPL37AP61513 92 aaKnown RBP7.63□□□□□ -1.19
HDAC7-226ENST00000547259 NPC2P61916 151 aa7.63□□□□□ -1.19
HDAC7-226ENST00000547259 ADAMTSL4-AS1Q5T5F5 129 aa7.63□□□□□ -1.19
HDAC7-226ENST00000547259 LITAFQ99732 161 aa7.63□□□□□ -1.19
HDAC7-226ENST00000547259 MIEN1Q9BRT3 115 aa7.63□□□□□ -1.19
HDAC7-226ENST00000547259 KRTAP10-4P60372 401 aaPredicted RBP7.62□□□□□ -1.19
HDAC7-226ENST00000547259 FAM19A5Q7Z5A7 132 aaPredicted RBP7.62□□□□□ -1.19
HDAC7-226ENST00000547259 SPANXDQ9BXN6 97 aa7.62□□□□□ -1.19
HDAC7-226ENST00000547259 SPANXCQ9NY87 97 aa7.62□□□□□ -1.19
HDAC7-226ENST00000547259 A0A087WYN8 130 aa7.61□□□□□ -1.19
HDAC7-226ENST00000547259 FAM168BA1KXE4 195 aa7.61□□□□□ -1.19
HDAC7-226ENST00000547259 PRO1933Q9H354 126 aa7.61□□□□□ -1.19
HDAC7-226ENST00000547259 UQCR10Q9UDW1 63 aa7.61□□□□□ -1.19
HDAC7-226ENST00000547259 SRSF9Q13242 221 aaKnown RBP eCLIP7.6□□□□□ -1.19
HDAC7-226ENST00000547259 Q6ZVH6 145 aa7.6□□□□□ -1.19
HDAC7-226ENST00000547259 LINC00518Q8N0U6 118 aa7.6□□□□□ -1.19
HDAC7-226ENST00000547259 LINC00308Q8TCZ7 52 aa7.6□□□□□ -1.19
HDAC7-226ENST00000547259 SPANXB1Q9NS25 103 aaPredicted RBP7.6□□□□□ -1.19
HDAC7-226ENST00000547259 FAT3Q8TDW7 4589 aa7.6□□□□□ -1.19
HDAC7-226ENST00000547259 HMCN2Q8NDA2 5059 aa7.6□□□□□ -1.19
HDAC7-226ENST00000547259 A0A1W2PNN7 141 aa7.59□□□□□ -1.19
HDAC7-226ENST00000547259 C2orf91Q6ZV80 131 aa7.59□□□□□ -1.19
HDAC7-226ENST00000547259 COPS9Q8WXC6 57 aa7.59□□□□□ -1.19
HDAC7-226ENST00000547259 PLAC8Q9NZF1 115 aa7.59□□□□□ -1.19
HDAC7-226ENST00000547259 HIGD1BQ9P298 99 aa7.59□□□□□ -1.19
HDAC7-226ENST00000547259 M0QXV9 152 aa7.58□□□□□ -1.2
HDAC7-226ENST00000547259 IFITM1P13164 125 aa7.58□□□□□ -1.2
HDAC7-226ENST00000547259 RPL24P83731 157 aaKnown RBP7.58□□□□□ -1.2
HDAC7-226ENST00000547259 SOSTDC1Q6X4U4 206 aa7.58□□□□□ -1.2
HDAC7-226ENST00000547259 NKAPP1Q8N9T2 125 aa7.58□□□□□ -1.2
HDAC7-226ENST00000547259 HIST1H4GQ99525 98 aa7.58□□□□□ -1.2
HDAC7-226ENST00000547259 PKHD1L1Q86WI1 4243 aa7.57□□□□□ -1.2
HDAC7-226ENST00000547259 TSTD3H0UI37 97 aa7.57□□□□□ -1.2
HDAC7-226ENST00000547259 VPREB1P12018 145 aa7.57□□□□□ -1.2
HDAC7-226ENST00000547259 UBR4Q5T4S7 5183 aa7.56□□□□□ -1.2
HDAC7-226ENST00000547259 IGLV5-37A0A075B6J1 123 aa7.56□□□□□ -1.2
HDAC7-226ENST00000547259 LOC107984156A0A0G2JMH3 177 aa7.56□□□□□ -1.2
HDAC7-226ENST00000547259 NCR3O14931 201 aa7.56□□□□□ -1.2
HDAC7-226ENST00000547259 EIF4EBP3O60516 100 aaPredicted RBP7.56□□□□□ -1.2
HDAC7-226ENST00000547259 HNRNPA3P51991 378 aaKnown RBP7.56□□□□□ -1.2
HDAC7-226ENST00000547259 KRTAP7-1Q8IUC3 87 aa7.56□□□□□ -1.2
HDAC7-226ENST00000547259 MUSTN1Q8IVN3 82 aa7.56□□□□□ -1.2
HDAC7-226ENST00000547259 ARL17AQ8IVW1 177 aa7.56□□□□□ -1.2
HDAC7-226ENST00000547259 Q8NDZ9 215 aa7.56□□□□□ -1.2
HDAC7-226ENST00000547259 PHF5AQ7RTV0 110 aaKnown RBP7.55□□□□□ -1.2
HDAC7-226ENST00000547259 C22orf24Q9Y442 160 aa7.55□□□□□ -1.2
HDAC7-226ENST00000547259 NDUFC2O95298 119 aa7.54□□□□□ -1.2
HDAC7-226ENST00000547259 MRPL55Q7Z7F7 128 aaKnown RBP7.54□□□□□ -1.2
HDAC7-226ENST00000547259 PPDPFQ9H3Y8 114 aa7.54□□□□□ -1.2
HDAC7-226ENST00000547259 UBE2BP63146 152 aa7.53□□□□□ -1.2
HDAC7-226ENST00000547259 PRR3P79522 188 aaKnown RBP7.53□□□□□ -1.2
HDAC7-226ENST00000547259 HSD52Q0P140 79 aa7.53□□□□□ -1.2
HDAC7-226ENST00000547259 TAL2Q16559 108 aa7.53□□□□□ -1.2
HDAC7-226ENST00000547259 LBHQ53QV2 105 aaPredicted RBP7.53□□□□□ -1.2
HDAC7-226ENST00000547259 C7orf33Q8WU49 177 aa7.53□□□□□ -1.2
HDAC7-226ENST00000547259 GAGE10A6NGK3 116 aa7.52□□□□□ -1.21
HDAC7-226ENST00000547259 M0R378 163 aa7.52□□□□□ -1.21
HDAC7-226ENST00000547259 CEND1Q8N111 149 aa7.51□□□□□ -1.21
HDAC7-226ENST00000547259 LINC00167Q96N53 147 aa7.51□□□□□ -1.21
HDAC7-226ENST00000547259 TRBV10-2A0A0K0K1G8 114 aa7.5□□□□□ -1.21
HDAC7-226ENST00000547259 A4D1N5 150 aa7.5□□□□□ -1.21
HDAC7-226ENST00000547259 RPL37AP8A6NKH3 93 aa7.5□□□□□ -1.21
HDAC7-226ENST00000547259 S100A7L2Q5SY68 101 aa7.5□□□□□ -1.21
HDAC7-226ENST00000547259 IGKV2-28A0A075B6P5 120 aa7.49□□□□□ -1.21
HDAC7-226ENST00000547259 IGKV2D-28P01615 120 aa7.49□□□□□ -1.21
HDAC7-226ENST00000547259 TMEM238LA0A1B0GVL6 79 aa7.48□□□□□ -1.21
HDAC7-226ENST00000547259 A6NJY4 79 aa7.48□□□□□ -1.21
HDAC7-226ENST00000547259 DDTP30046 118 aa7.48□□□□□ -1.21
HDAC7-226ENST00000547259 OR13C6PQ8NH95 151 aa7.48□□□□□ -1.21
HDAC7-226ENST00000547259 IGLV1-50A0A075B6I6 118 aa7.47□□□□□ -1.21
HDAC7-226ENST00000547259 TRBV10-3A0A0K0K1G6 114 aa7.47□□□□□ -1.21
HDAC7-226ENST00000547259 MT1HL1P0DM35 61 aa7.47□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 81.4 ms