RNA–Protein interactions for RNA: ENST00000546974.1

COL2A1-209, Transcript of collagen type II alpha 1 chain, humanhuman

TSL 1 (best)

Gene COL2A1, Length 703 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL2A1-209ENST00000546974 ANAPC11Q9NYG5 84 aa8.44□□□□□ -1.06
COL2A1-209ENST00000546974 KRTAP13-2Q52LG2 175 aa8.43□□□□□ -1.06
COL2A1-209ENST00000546974 ZNF625Q96I27 306 aaPredicted RBP8.43□□□□□ -1.06
COL2A1-209ENST00000546974 TMEM126AQ9H061 195 aa8.43□□□□□ -1.06
COL2A1-209ENST00000546974 CHTOPQ9Y3Y2 248 aaKnown RBP8.42□□□□□ -1.06
COL2A1-209ENST00000546974 PRLHP81277 87 aa8.41□□□□□ -1.06
COL2A1-209ENST00000546974 FAM19A1Q7Z5A9 133 aa8.41□□□□□ -1.06
COL2A1-209ENST00000546974 TMEM238C9JI98 176 aa8.4□□□□□ -1.06
COL2A1-209ENST00000546974 M0R378 163 aa8.4□□□□□ -1.06
COL2A1-209ENST00000546974 Q8NDZ9 215 aa8.4□□□□□ -1.06
COL2A1-209ENST00000546974 TRAV12-1A0A0B4J245 112 aa8.39□□□□□ -1.07
COL2A1-209ENST00000546974 CHCHD1Q96BP2 118 aaKnown RBP8.39□□□□□ -1.07
COL2A1-209ENST00000546974 IGKV2D-26A0A0A0MRZ7 120 aa8.38□□□□□ -1.07
COL2A1-209ENST00000546974 TMEM223A0PJW6 202 aa8.38□□□□□ -1.07
COL2A1-209ENST00000546974 LINC00158P58513 81 aa8.38□□□□□ -1.07
COL2A1-209ENST00000546974 LINC00304Q8N9R0 145 aa8.38□□□□□ -1.07
COL2A1-209ENST00000546974 MUC17Q685J3 4493 aa8.38□□□□□ -1.07
COL2A1-209ENST00000546974 CTAG1AP78358 180 aa8.37□□□□□ -1.07
COL2A1-209ENST00000546974 IFI27L1Q96BM0 104 aa8.37□□□□□ -1.07
COL2A1-209ENST00000546974 PLEKHB2Q96CS7 222 aa8.37□□□□□ -1.07
COL2A1-209ENST00000546974 TRGC2P03986 189 aa8.36□□□□□ -1.07
COL2A1-209ENST00000546974 A0A0U1RRA0 63 aa8.34□□□□□ -1.07
COL2A1-209ENST00000546974 SMIM13P0DJ93 91 aa8.33□□□□□ -1.08
COL2A1-209ENST00000546974 HERV-K104P63124 156 aa8.32□□□□□ -1.08
COL2A1-209ENST00000546974 MEIG1Q5JSS6 88 aa8.32□□□□□ -1.08
COL2A1-209ENST00000546974 RETNLBQ9BQ08 111 aa8.32□□□□□ -1.08
COL2A1-209ENST00000546974 HIGD2AQ9BW72 106 aa8.32□□□□□ -1.08
COL2A1-209ENST00000546974 LINC00587B1AMM8 73 aa8.31□□□□□ -1.08
COL2A1-209ENST00000546974 PRYO14603 147 aa8.31□□□□□ -1.08
COL2A1-209ENST00000546974 HSBP1O75506 76 aa8.31□□□□□ -1.08
COL2A1-209ENST00000546974 LINC00310P59036 64 aa8.31□□□□□ -1.08
COL2A1-209ENST00000546974 C3orf22Q8N5N4 141 aa8.31□□□□□ -1.08
COL2A1-209ENST00000546974 BOD1L2Q8IYS8 172 aa8.3□□□□□ -1.08
COL2A1-209ENST00000546974 FAM19A2Q8N3H0 131 aa8.3□□□□□ -1.08
COL2A1-209ENST00000546974 MIR7-3HGQ8N6C7 128 aa8.3□□□□□ -1.08
COL2A1-209ENST00000546974 SPRR4Q96PI1 79 aa8.3□□□□□ -1.08
COL2A1-209ENST00000546974 A0A0U1RQV1 116 aa8.29□□□□□ -1.08
COL2A1-209ENST00000546974 MYMXA0A1B0GTQ4 84 aa8.29□□□□□ -1.08
COL2A1-209ENST00000546974 HIST1H2BKO60814 126 aa8.29□□□□□ -1.08
COL2A1-209ENST00000546974 HIST1H2BJP06899 126 aa8.29□□□□□ -1.08
COL2A1-209ENST00000546974 HIST1H2BOP23527 126 aa8.29□□□□□ -1.08
COL2A1-209ENST00000546974 HIST1H2BBP33778 126 aa8.29□□□□□ -1.08
COL2A1-209ENST00000546974 HIST1H2BDP58876 126 aa8.29□□□□□ -1.08
COL2A1-209ENST00000546974 HIST1H2BCP62807 126 aa8.29□□□□□ -1.08
COL2A1-209ENST00000546974 HIST2H2BEQ16778 126 aa8.29□□□□□ -1.08
COL2A1-209ENST00000546974 HIST2H2BFQ5QNW6 126 aaPredicted RBP8.29□□□□□ -1.08
COL2A1-209ENST00000546974 LINC00337Q8N6G1 96 aa8.29□□□□□ -1.08
COL2A1-209ENST00000546974 HIST1H2BHQ93079 126 aa8.29□□□□□ -1.08
COL2A1-209ENST00000546974 HIST1H2BNQ99877 126 aa8.29□□□□□ -1.08
COL2A1-209ENST00000546974 HIST1H2BMQ99879 126 aa8.29□□□□□ -1.08
COL2A1-209ENST00000546974 KCNQ1DNQ9H478 68 aa8.29□□□□□ -1.08
COL2A1-209ENST00000546974 NDUFA12Q9UI09 145 aa8.29□□□□□ -1.08
COL2A1-209ENST00000546974 SPRR1AP35321 89 aa8.28□□□□□ -1.08
COL2A1-209ENST00000546974 TPRXLQ17RH7 258 aa8.28□□□□□ -1.08
COL2A1-209ENST00000546974 SPAG11AQ6PDA7 123 aa8.28□□□□□ -1.08
COL2A1-209ENST00000546974 MAP1LC3CQ9BXW4 147 aa8.28□□□□□ -1.08
COL2A1-209ENST00000546974 ZNF706Q9Y5V0 76 aaPredicted RBP8.28□□□□□ -1.08
COL2A1-209ENST00000546974 FAT4Q6V0I7 4981 aa8.28□□□□□ -1.08
COL2A1-209ENST00000546974 NCR3O14931 201 aa8.27□□□□□ -1.09
COL2A1-209ENST00000546974 COA6Q5JTJ3 125 aaKnown RBP8.27□□□□□ -1.09
COL2A1-209ENST00000546974 IGLV7-46A0A075B6I9 117 aa8.26□□□□□ -1.09
COL2A1-209ENST00000546974 KRTAP4-16G5E9R7 235 aaPredicted RBP8.26□□□□□ -1.09
COL2A1-209ENST00000546974 LEPROTL1O95214 131 aa8.26□□□□□ -1.09
COL2A1-209ENST00000546974 ETDCA0A1B0GVM5 59 aa8.25□□□□□ -1.09
COL2A1-209ENST00000546974 H0Y8G0 127 aa8.25□□□□□ -1.09
COL2A1-209ENST00000546974 CDIP1Q9H305 208 aa8.25□□□□□ -1.09
COL2A1-209ENST00000546974 LOC107984156A0A0G2JMH3 177 aa8.24□□□□□ -1.09
COL2A1-209ENST00000546974 TRBV10-3A0A0K0K1G6 114 aa8.24□□□□□ -1.09
COL2A1-209ENST00000546974 LEPROTO15243 131 aa8.24□□□□□ -1.09
COL2A1-209ENST00000546974 ARL17AQ8IVW1 177 aa8.24□□□□□ -1.09
COL2A1-209ENST00000546974 SMCR5Q8TEV8 140 aa8.24□□□□□ -1.09
COL2A1-209ENST00000546974 SERF1AO75920 110 aa8.23□□□□□ -1.09
COL2A1-209ENST00000546974 PLNP26678 52 aa8.23□□□□□ -1.09
COL2A1-209ENST00000546974 TSPEAR-AS2P59090 65 aa8.23□□□□□ -1.09
COL2A1-209ENST00000546974 S100A12P80511 92 aa8.23□□□□□ -1.09
COL2A1-209ENST00000546974 C4orf48Q5BLP8 95 aa8.23□□□□□ -1.09
COL2A1-209ENST00000546974 TRBV10-2A0A0K0K1G8 114 aa8.22□□□□□ -1.09
COL2A1-209ENST00000546974 PPDPFQ9H3Y8 114 aa8.22□□□□□ -1.09
COL2A1-209ENST00000546974 HSPB8Q9UJY1 196 aa8.22□□□□□ -1.09
COL2A1-209ENST00000546974 J3QQQ9 107 aa8.21□□□□□ -1.1
COL2A1-209ENST00000546974 HERVK_113P61574 105 aa8.21□□□□□ -1.1
COL2A1-209ENST00000546974 B5MCH6 92 aa8.2□□□□□ -1.1
COL2A1-209ENST00000546974 DPM2O94777 84 aa8.2□□□□□ -1.1
COL2A1-209ENST00000546974 NMUP48645 174 aa8.2□□□□□ -1.1
COL2A1-209ENST00000546974 LINC00483Q53H64 154 aa8.2□□□□□ -1.1
COL2A1-209ENST00000546974 FP248Q71RG6 208 aaPredicted RBP8.2□□□□□ -1.1
COL2A1-209ENST00000546974 DAND5Q8N907 189 aa8.2□□□□□ -1.1
COL2A1-209ENST00000546974 Q8NBF4 154 aa8.2□□□□□ -1.1
COL2A1-209ENST00000546974 DDTP30046 118 aa8.19□□□□□ -1.1
COL2A1-209ENST00000546974 IGKCP01834 107 aa8.18□□□□□ -1.1
COL2A1-209ENST00000546974 FABP4P15090 132 aa8.18□□□□□ -1.1
COL2A1-209ENST00000546974 SPANXB1Q9NS25 103 aaPredicted RBP8.18□□□□□ -1.1
COL2A1-209ENST00000546974 NDUFC2O95298 119 aa8.17□□□□□ -1.1
COL2A1-209ENST00000546974 SPINK1P00995 79 aa8.17□□□□□ -1.1
COL2A1-209ENST00000546974 LGALS3P17931 250 aaKnown RBP8.17□□□□□ -1.1
COL2A1-209ENST00000546974 GAGE2AQ6NT46 116 aa8.17□□□□□ -1.1
COL2A1-209ENST00000546974 PMCHL2Q9BQD1 86 aa8.17□□□□□ -1.1
COL2A1-209ENST00000546974 MIEN1Q9BRT3 115 aa8.17□□□□□ -1.1
COL2A1-209ENST00000546974 ERC2-IT1O76042 136 aa8.15□□□□□ -1.1
COL2A1-209ENST00000546974 IGLV6-57P01721 117 aa8.15□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 57.4 ms