RNA–Protein interactions for RNA: ENST00000546538.1

CHERP-204, Transcript of calcium homeostasis endoplasmic reticulum protein, humanhuman

TSL 1 (best)

Gene CHERP, Length 1,429 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHERP-204ENST00000546538 ZNF625Q96I27 306 aaPredicted RBP10.8□□□□□ -0.68
CHERP-204ENST00000546538 C11orf86A6NJI1 115 aa10.79□□□□□ -0.68
CHERP-204ENST00000546538 NDUFA6P56556 154 aa10.79□□□□□ -0.68
CHERP-204ENST00000546538 LINC00304Q8N9R0 145 aa10.78□□□□□ -0.68
CHERP-204ENST00000546538 HBDP02042 147 aa10.76□□□□□ -0.69
CHERP-204ENST00000546538 LINC00614P0C842 121 aa10.76□□□□□ -0.69
CHERP-204ENST00000546538 FAM19A1Q7Z5A9 133 aa10.76□□□□□ -0.69
CHERP-204ENST00000546538 COX17Q14061 63 aa10.75□□□□□ -0.69
CHERP-204ENST00000546538 LCE2AQ5TA79 106 aaPredicted RBP10.75□□□□□ -0.69
CHERP-204ENST00000546538 C3orf22Q8N5N4 141 aa10.75□□□□□ -0.69
CHERP-204ENST00000546538 PLEKHB2Q96CS7 222 aa10.75□□□□□ -0.69
CHERP-204ENST00000546538 TRAPPC1Q9Y5R8 145 aa10.75□□□□□ -0.69
CHERP-204ENST00000546538 BAGE3Q86Y29 109 aa10.73□□□□□ -0.69
CHERP-204ENST00000546538 IGKV2D-26A0A0A0MRZ7 120 aa10.72□□□□□ -0.69
CHERP-204ENST00000546538 TRGC2P03986 189 aa10.72□□□□□ -0.69
CHERP-204ENST00000546538 RPL24P83731 157 aaKnown RBP10.72□□□□□ -0.69
CHERP-204ENST00000546538 TMEM170BQ5T4T1 132 aa10.71□□□□□ -0.69
CHERP-204ENST00000546538 TPRXLQ17RH7 258 aa10.7□□□□□ -0.7
CHERP-204ENST00000546538 A0A0U1RRA0 63 aa10.68□□□□□ -0.7
CHERP-204ENST00000546538 IGLV7-46A0A075B6I9 117 aa10.67□□□□□ -0.7
CHERP-204ENST00000546538 TMEM223A0PJW6 202 aa10.67□□□□□ -0.7
CHERP-204ENST00000546538 HIGD2AQ9BW72 106 aa10.67□□□□□ -0.7
CHERP-204ENST00000546538 KRTAP9-2Q9BYQ4 174 aa10.67□□□□□ -0.7
CHERP-204ENST00000546538 CHTOPQ9Y3Y2 248 aaKnown RBP10.67□□□□□ -0.7
CHERP-204ENST00000546538 A0A0U1RQV1 116 aa10.67□□□□□ -0.7
CHERP-204ENST00000546538 SPRR4Q96PI1 79 aa10.67□□□□□ -0.7
CHERP-204ENST00000546538 TMA7Q9Y2S6 64 aaKnown RBP10.67□□□□□ -0.7
CHERP-204ENST00000546538 LINC00158P58513 81 aa10.66□□□□□ -0.7
CHERP-204ENST00000546538 SFTA2Q6UW10 78 aa10.66□□□□□ -0.7
CHERP-204ENST00000546538 SMIM13P0DJ93 91 aa10.64□□□□□ -0.71
CHERP-204ENST00000546538 CDIP1Q9H305 208 aa10.64□□□□□ -0.71
CHERP-204ENST00000546538 HIST1H2BKO60814 126 aa10.63□□□□□ -0.71
CHERP-204ENST00000546538 HIST1H2BJP06899 126 aa10.63□□□□□ -0.71
CHERP-204ENST00000546538 HIST1H2BOP23527 126 aa10.63□□□□□ -0.71
CHERP-204ENST00000546538 HIST1H2BBP33778 126 aa10.63□□□□□ -0.71
CHERP-204ENST00000546538 HIST1H2BDP58876 126 aa10.63□□□□□ -0.71
CHERP-204ENST00000546538 HIST1H2BCP62807 126 aa10.63□□□□□ -0.71
CHERP-204ENST00000546538 CTAG1AP78358 180 aa10.63□□□□□ -0.71
CHERP-204ENST00000546538 HIST2H2BEQ16778 126 aa10.63□□□□□ -0.71
CHERP-204ENST00000546538 HIST2H2BFQ5QNW6 126 aaPredicted RBP10.63□□□□□ -0.71
CHERP-204ENST00000546538 HIST1H2BHQ93079 126 aa10.63□□□□□ -0.71
CHERP-204ENST00000546538 HIST1H2BNQ99877 126 aa10.63□□□□□ -0.71
CHERP-204ENST00000546538 HIST1H2BMQ99879 126 aa10.63□□□□□ -0.71
CHERP-204ENST00000546538 TRAV12-1A0A0B4J245 112 aa10.62□□□□□ -0.71
CHERP-204ENST00000546538 KRTAP4-16G5E9R7 235 aaPredicted RBP10.62□□□□□ -0.71
CHERP-204ENST00000546538 SPRR1AP35321 89 aa10.62□□□□□ -0.71
CHERP-204ENST00000546538 PPDPFQ9H3Y8 114 aa10.61□□□□□ -0.71
CHERP-204ENST00000546538 S100A6P06703 90 aa10.6□□□□□ -0.71
CHERP-204ENST00000546538 IFI27L1Q96BM0 104 aa10.6□□□□□ -0.71
CHERP-204ENST00000546538 NCR3O14931 201 aa10.59□□□□□ -0.71
CHERP-204ENST00000546538 BOD1L2Q8IYS8 172 aa10.59□□□□□ -0.71
CHERP-204ENST00000546538 MIR7-3HGQ8N6C7 128 aa10.59□□□□□ -0.71
CHERP-204ENST00000546538 DAND5Q8N907 189 aa10.59□□□□□ -0.71
CHERP-204ENST00000546538 PRYO14603 147 aa10.58□□□□□ -0.72
CHERP-204ENST00000546538 KCNQ1DNQ9H478 68 aa10.58□□□□□ -0.72
CHERP-204ENST00000546538 LINC00337Q8N6G1 96 aa10.58□□□□□ -0.72
CHERP-204ENST00000546538 SMCR5Q8TEV8 140 aa10.58□□□□□ -0.72
CHERP-204ENST00000546538 CHCHD1Q96BP2 118 aaKnown RBP10.58□□□□□ -0.72
CHERP-204ENST00000546538 TSPEAR-AS2P59090 65 aa10.57□□□□□ -0.72
CHERP-204ENST00000546538 Q8NBF4 154 aa10.57□□□□□ -0.72
CHERP-204ENST00000546538 TRBV10-3A0A0K0K1G6 114 aa10.56□□□□□ -0.72
CHERP-204ENST00000546538 SPAG11AQ6PDA7 123 aa10.56□□□□□ -0.72
CHERP-204ENST00000546538 FAM19A2Q8N3H0 131 aa10.56□□□□□ -0.72
CHERP-204ENST00000546538 MEIG1Q5JSS6 88 aa10.55□□□□□ -0.72
CHERP-204ENST00000546538 KRTAP13-3Q3SY46 172 aa10.54□□□□□ -0.72
CHERP-204ENST00000546538 COA6Q5JTJ3 125 aaKnown RBP10.54□□□□□ -0.72
CHERP-204ENST00000546538 LINC00310P59036 64 aa10.53□□□□□ -0.72
CHERP-204ENST00000546538 LINC00483Q53H64 154 aa10.53□□□□□ -0.72
CHERP-204ENST00000546538 NDUFA12Q9UI09 145 aa10.53□□□□□ -0.72
CHERP-204ENST00000546538 ZNF706Q9Y5V0 76 aaPredicted RBP10.53□□□□□ -0.72
CHERP-204ENST00000546538 ERC2-IT1O76042 136 aa10.52□□□□□ -0.73
CHERP-204ENST00000546538 HERV-K104P63124 156 aa10.52□□□□□ -0.73
CHERP-204ENST00000546538 FP248Q71RG6 208 aaPredicted RBP10.51□□□□□ -0.73
CHERP-204ENST00000546538 B5MCH6 92 aa10.5□□□□□ -0.73
CHERP-204ENST00000546538 SERF1AO75920 110 aa10.5□□□□□ -0.73
CHERP-204ENST00000546538 SNRPEP62304 92 aaKnown RBP10.5□□□□□ -0.73
CHERP-204ENST00000546538 KRTAP4-1Q9BYQ7 146 aa10.5□□□□□ -0.73
CHERP-204ENST00000546538 LOC107984156A0A0G2JMH3 177 aa10.49□□□□□ -0.73
CHERP-204ENST00000546538 ETDCA0A1B0GVM5 59 aa10.49□□□□□ -0.73
CHERP-204ENST00000546538 C5orf52A6NGY3 159 aa10.49□□□□□ -0.73
CHERP-204ENST00000546538 HSBP1O75506 76 aa10.49□□□□□ -0.73
CHERP-204ENST00000546538 S100A2P29034 98 aa10.49□□□□□ -0.73
CHERP-204ENST00000546538 ARL17AQ8IVW1 177 aa10.49□□□□□ -0.73
CHERP-204ENST00000546538 Q9BRP9 147 aa10.49□□□□□ -0.73
CHERP-204ENST00000546538 MYMXA0A1B0GTQ4 84 aa10.47□□□□□ -0.73
CHERP-204ENST00000546538 H0Y8G0 127 aa10.47□□□□□ -0.73
CHERP-204ENST00000546538 GAGE2AQ6NT46 116 aa10.47□□□□□ -0.73
CHERP-204ENST00000546538 C4orf48Q5BLP8 95 aa10.46□□□□□ -0.74
CHERP-204ENST00000546538 LEPROTO15243 131 aa10.45□□□□□ -0.74
CHERP-204ENST00000546538 SPINK1P00995 79 aa10.45□□□□□ -0.74
CHERP-204ENST00000546538 HIST3H2BBQ8N257 126 aa10.45□□□□□ -0.74
CHERP-204ENST00000546538 EIF4EBP3O60516 100 aaPredicted RBP10.44□□□□□ -0.74
CHERP-204ENST00000546538 MOBPQ13875 183 aa10.44□□□□□ -0.74
CHERP-204ENST00000546538 ASB16-AS1Q495Z4 193 aa10.44□□□□□ -0.74
CHERP-204ENST00000546538 LINC00587B1AMM8 73 aa10.43□□□□□ -0.74
CHERP-204ENST00000546538 DDTP30046 118 aa10.43□□□□□ -0.74
CHERP-204ENST00000546538 Q8N377 158 aa10.43□□□□□ -0.74
CHERP-204ENST00000546538 IGLV9-49A0A0B4J1Y8 123 aa10.42□□□□□ -0.74
CHERP-204ENST00000546538 TRBV10-2A0A0K0K1G8 114 aa10.42□□□□□ -0.74
CHERP-204ENST00000546538 Q6ZRX8 168 aa10.42□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 113.4 ms