RNA–Protein interactions for RNA: ENST00000545450.6

MSLN-202, Transcript of mesothelin, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene MSLN, Length 2,162 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSLN-202ENST00000545450 XCL1P47992 114 aa12.9□□□□□ -0.34
MSLN-202ENST00000545450 Q8N814 137 aa12.9□□□□□ -0.34
MSLN-202ENST00000545450 TMEM258P61165 79 aa12.88□□□□□ -0.35
MSLN-202ENST00000545450 S100A7L2Q5SY68 101 aa12.88□□□□□ -0.35
MSLN-202ENST00000545450 IGHV4-28A0A0C4DH34 117 aa12.88□□□□□ -0.35
MSLN-202ENST00000545450 A0A1B0GUV1 79 aa12.88□□□□□ -0.35
MSLN-202ENST00000545450 FAM19A5Q7Z5A7 132 aaPredicted RBP12.87□□□□□ -0.35
MSLN-202ENST00000545450 TMEM256-PLSCR3K7ERE1 68 aa12.87□□□□□ -0.35
MSLN-202ENST00000545450 Q8NAQ8 132 aa12.87□□□□□ -0.35
MSLN-202ENST00000545450 NDUFC2O95298 119 aa12.86□□□□□ -0.35
MSLN-202ENST00000545450 PRR3P79522 188 aaKnown RBP12.86□□□□□ -0.35
MSLN-202ENST00000545450 ATP5EP2Q5VTU8 51 aa12.86□□□□□ -0.35
MSLN-202ENST00000545450 LYPD5Q6UWN5 251 aa12.86□□□□□ -0.35
MSLN-202ENST00000545450 LYRM9A8MSI8 78 aa12.84□□□□□ -0.35
MSLN-202ENST00000545450 MIFP14174 115 aa12.84□□□□□ -0.35
MSLN-202ENST00000545450 NOTCH1P46531 2555 aa12.84□□□□□ -0.35
MSLN-202ENST00000545450 DPH3Q96FX2 82 aa12.83□□□□□ -0.36
MSLN-202ENST00000545450 GYPEP15421 78 aa12.83□□□□□ -0.36
MSLN-202ENST00000545450 COX17Q14061 63 aa12.83□□□□□ -0.36
MSLN-202ENST00000545450 KIAA0087Q14695 138 aa12.83□□□□□ -0.36
MSLN-202ENST00000545450 CELA1Q9UNI1 258 aa12.83□□□□□ -0.36
MSLN-202ENST00000545450 CLPSL2Q6UWE3 100 aa12.8□□□□□ -0.36
MSLN-202ENST00000545450 TRBV10-3A0A0K0K1G6 114 aa12.79□□□□□ -0.36
MSLN-202ENST00000545450 RETNQ9HD89 108 aa12.79□□□□□ -0.36
MSLN-202ENST00000545450 NBEAL1Q6ZS30 2694 aa12.79□□□□□ -0.36
MSLN-202ENST00000545450 CD164L2Q6UWJ8 174 aa12.78□□□□□ -0.36
MSLN-202ENST00000545450 DAD1P61803 113 aa12.77□□□□□ -0.36
MSLN-202ENST00000545450 GHRHP01286 108 aa12.77□□□□□ -0.37
MSLN-202ENST00000545450 ENHOQ6UWT2 76 aa12.77□□□□□ -0.37
MSLN-202ENST00000545450 FAM19A1Q7Z5A9 133 aa12.77□□□□□ -0.37
MSLN-202ENST00000545450 C6orf99Q4VX62 202 aa12.76□□□□□ -0.37
MSLN-202ENST00000545450 UBL5Q9BZL1 73 aa12.76□□□□□ -0.37
MSLN-202ENST00000545450 PRO0255Q9UI72 69 aa12.76□□□□□ -0.37
MSLN-202ENST00000545450 C5orf47Q569G3 176 aa12.76□□□□□ -0.37
MSLN-202ENST00000545450 LINC00575Q6W349 94 aa12.76□□□□□ -0.37
MSLN-202ENST00000545450 Q8NDZ9 215 aa12.76□□□□□ -0.37
MSLN-202ENST00000545450 TRAV23DV6A0A075B6W5 121 aa12.75□□□□□ -0.37
MSLN-202ENST00000545450 SPART-AS1P0CW21 52 aa12.74□□□□□ -0.37
MSLN-202ENST00000545450 LINC00269Q8N2A0 174 aa12.74□□□□□ -0.37
MSLN-202ENST00000545450 TENM3Q9P273 2699 aa12.74□□□□□ -0.37
MSLN-202ENST00000545450 DSCR8Q96T75 97 aa12.74□□□□□ -0.37
MSLN-202ENST00000545450 C9orf116Q5BN46 136 aaPredicted RBP12.73□□□□□ -0.37
MSLN-202ENST00000545450 CHCHD10Q8WYQ3 142 aaPredicted RBP12.73□□□□□ -0.37
MSLN-202ENST00000545450 MDFIQ99750 246 aa12.73□□□□□ -0.37
MSLN-202ENST00000545450 A0A096LPF7 62 aa12.73□□□□□ -0.37
MSLN-202ENST00000545450 OXTP01178 125 aa12.73□□□□□ -0.37
MSLN-202ENST00000545450 Q6ZQT0 140 aa12.73□□□□□ -0.37
MSLN-202ENST00000545450 PRB2P02812 416 aaPredicted RBP12.72□□□□□ -0.37
MSLN-202ENST00000545450 LOC110117498A0A087WWA1 95 aa12.71□□□□□ -0.37
MSLN-202ENST00000545450 NDUFC2-KCTD14E9PQ53 114 aa12.71□□□□□ -0.37
MSLN-202ENST00000545450 RBM3P98179 157 aaKnown RBP12.7□□□□□ -0.38
MSLN-202ENST00000545450 MGAM2Q2M2H8 2515 aa12.7□□□□□ -0.38
MSLN-202ENST00000545450 ZNF561-AS1K7EIQ3 104 aa12.7□□□□□ -0.38
MSLN-202ENST00000545450 IGLV10-54A0A075B6I4 117 aa12.69□□□□□ -0.38
MSLN-202ENST00000545450 C6orf223Q8N319 242 aa12.69□□□□□ -0.38
MSLN-202ENST00000545450 HTN3P15516 51 aa12.68□□□□□ -0.38
MSLN-202ENST00000545450 REG3AQ06141 175 aa12.68□□□□□ -0.38
MSLN-202ENST00000545450 BCE1O60756 84 aa12.67□□□□□ -0.38
MSLN-202ENST00000545450 MUC7Q8TAX7 377 aa12.67□□□□□ -0.38
MSLN-202ENST00000545450 ANGP03950 147 aaKnown RBP12.66□□□□□ -0.38
MSLN-202ENST00000545450 Q8N3U1 123 aa12.66□□□□□ -0.38
MSLN-202ENST00000545450 IGLV6-57P01721 117 aa12.64□□□□□ -0.39
MSLN-202ENST00000545450 K7EIL1 84 aa12.64□□□□□ -0.39
MSLN-202ENST00000545450 C10orf25Q5T742 122 aa12.64□□□□□ -0.39
MSLN-202ENST00000545450 C20orf197Q8N268 126 aa12.64□□□□□ -0.39
MSLN-202ENST00000545450 LAMTOR3Q9UHA4 124 aa12.64□□□□□ -0.39
MSLN-202ENST00000545450 M0R2N4 97 aa12.63□□□□□ -0.39
MSLN-202ENST00000545450 LINC01547P58512 204 aaPredicted RBP12.63□□□□□ -0.39
MSLN-202ENST00000545450 UNQ6190/PRO20217Q6UXQ8 127 aa12.63□□□□□ -0.39
MSLN-202ENST00000545450 A0A0J9YWU9 116 aa12.62□□□□□ -0.39
MSLN-202ENST00000545450 TRAV7A0A075B6U4 112 aa12.62□□□□□ -0.39
MSLN-202ENST00000545450 Q6ZVQ6 151 aa12.61□□□□□ -0.39
MSLN-202ENST00000545450 H3BQ85 93 aa12.6□□□□□ -0.39
MSLN-202ENST00000545450 PDE6GP18545 87 aa12.6□□□□□ -0.39
MSLN-202ENST00000545450 SPAG11BQ08648 103 aa12.6□□□□□ -0.39
MSLN-202ENST00000545450 KPRPQ5T749 579 aaPredicted RBP12.6□□□□□ -0.39
MSLN-202ENST00000545450 Q5XG85 94 aa12.6□□□□□ -0.39
MSLN-202ENST00000545450 Q6ZTC4 211 aa12.6□□□□□ -0.39
MSLN-202ENST00000545450 Q6ZQY7 126 aa12.59□□□□□ -0.39
MSLN-202ENST00000545450 HUWE1Q7Z6Z7 4374 aaKnown RBP12.59□□□□□ -0.39
MSLN-202ENST00000545450 HAMPP81172 84 aa12.57□□□□□ -0.4
MSLN-202ENST00000545450 CXCL6P80162 114 aa12.57□□□□□ -0.4
MSLN-202ENST00000545450 FAM236DA0A1B0GTK5 79 aa12.56□□□□□ -0.4
MSLN-202ENST00000545450 H7BZZ5 65 aa12.56□□□□□ -0.4
MSLN-202ENST00000545450 FAM236CP0DP71 79 aa12.56□□□□□ -0.4
MSLN-202ENST00000545450 C4orf26Q17RF5 130 aa12.56□□□□□ -0.4
MSLN-202ENST00000545450 MRAPQ8TCY5 172 aa12.56□□□□□ -0.4
MSLN-202ENST00000545450 TM2D3Q9BRN9 247 aa12.56□□□□□ -0.4
MSLN-202ENST00000545450 GVQW2A0A096LPI5 108 aaPredicted RBP12.54□□□□□ -0.4
MSLN-202ENST00000545450 KLKP1Q107X0 134 aa12.54□□□□□ -0.4
MSLN-202ENST00000545450 TRAV10A0A0B4J240 114 aa12.54□□□□□ -0.4
MSLN-202ENST00000545450 EPM2AB3EWF7 344 aa12.54□□□□□ -0.4
MSLN-202ENST00000545450 C11orf45Q8TAV5 145 aa12.53□□□□□ -0.4
MSLN-202ENST00000545450 TRBV7-4A0A0J9YYF1 115 aa12.52□□□□□ -0.4
MSLN-202ENST00000545450 DIRC1Q969H9 104 aa12.52□□□□□ -0.4
MSLN-202ENST00000545450 PRR34Q9NV39 138 aa12.52□□□□□ -0.4
MSLN-202ENST00000545450 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP12.52□□□□□ -0.41
MSLN-202ENST00000545450 LELP1Q5T871 98 aa12.51□□□□□ -0.41
MSLN-202ENST00000545450 H3BNG1 76 aa12.5□□□□□ -0.41
MSLN-202ENST00000545450 SERP1Q9Y6X1 66 aa12.5□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 45.7 ms