RNA–Protein interactions for RNA: ENST00000545305.1

SCARB1-209, Transcript of scavenger receptor class B member 1, humanhuman

TSL 2

Gene SCARB1, Length 851 nt, Biotype processed transcript, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB1-209ENST00000545305 A0A1B0GWB2 263 aa8.9□□□□□ -0.98
SCARB1-209ENST00000545305 K7ERJ3 54 aa8.9□□□□□ -0.98
SCARB1-209ENST00000545305 NDUFC2O95298 119 aa8.9□□□□□ -0.98
SCARB1-209ENST00000545305 CFC1BP0CG36 223 aa8.9□□□□□ -0.98
SCARB1-209ENST00000545305 CFC1P0CG37 223 aa8.9□□□□□ -0.98
SCARB1-209ENST00000545305 LBHQ53QV2 105 aaPredicted RBP8.9□□□□□ -0.98
SCARB1-209ENST00000545305 IGLV5-52A0A0A0MRZ9 124 aa8.89□□□□□ -0.99
SCARB1-209ENST00000545305 TRAV13-2A0A0B4J235 113 aa8.88□□□□□ -0.99
SCARB1-209ENST00000545305 LINC00336Q6ZUF6 198 aa8.88□□□□□ -0.99
SCARB1-209ENST00000545305 PRO1854Q9UHT4 67 aa8.88□□□□□ -0.99
SCARB1-209ENST00000545305 SACSQ9NZJ4 4579 aa8.87□□□□□ -0.99
SCARB1-209ENST00000545305 DNAH2Q9P225 4427 aa8.87□□□□□ -0.99
SCARB1-209ENST00000545305 C16orf90A8MZG2 172 aa8.87□□□□□ -0.99
SCARB1-209ENST00000545305 C9orf129Q5T035 196 aaKnown RBP8.87□□□□□ -0.99
SCARB1-209ENST00000545305 A0A096LNI7 61 aa8.86□□□□□ -0.99
SCARB1-209ENST00000545305 NCR3O14931 201 aa8.86□□□□□ -0.99
SCARB1-209ENST00000545305 RPL13AP40429 203 aaKnown RBP8.86□□□□□ -0.99
SCARB1-209ENST00000545305 DNAH17Q9UFH2 4485 aa8.85□□□□□ -0.99
SCARB1-209ENST00000545305 IGKV2-24A0A0C4DH68 120 aa8.85□□□□□ -0.99
SCARB1-209ENST00000545305 Q1RN00 199 aa8.85□□□□□ -0.99
SCARB1-209ENST00000545305 LINC00474Q9P2X8 69 aa8.85□□□□□ -0.99
SCARB1-209ENST00000545305 HYDINQ4G0P3 5121 aa8.84□□□□□ -0.99
SCARB1-209ENST00000545305 IGKV2-28A0A075B6P5 120 aa8.84□□□□□ -0.99
SCARB1-209ENST00000545305 TRBV10-2A0A0K0K1G8 114 aa8.84□□□□□ -0.99
SCARB1-209ENST00000545305 TAX1BP3O14907 124 aa8.84□□□□□ -0.99
SCARB1-209ENST00000545305 IGKV2D-28P01615 120 aa8.84□□□□□ -0.99
SCARB1-209ENST00000545305 VPREB1P12018 145 aa8.84□□□□□ -0.99
SCARB1-209ENST00000545305 LINC01620Q4KN68 170 aa8.84□□□□□ -0.99
SCARB1-209ENST00000545305 NKAPP1Q8N9T2 125 aa8.84□□□□□ -0.99
SCARB1-209ENST00000545305 OR13C6PQ8NH95 151 aa8.84□□□□□ -0.99
SCARB1-209ENST00000545305 PGPEP1Q9NXJ5 209 aa8.84□□□□□ -0.99
SCARB1-209ENST00000545305 PLA2G2DQ9UNK4 145 aa8.84□□□□□ -0.99
SCARB1-209ENST00000545305 H7C2G1 150 aa8.83□□□□□ -1
SCARB1-209ENST00000545305 S100A7L2Q5SY68 101 aa8.83□□□□□ -1
SCARB1-209ENST00000545305 SDIM1Q6ZPB5 146 aa8.83□□□□□ -1
SCARB1-209ENST00000545305 LINC00337Q8N6G1 96 aa8.83□□□□□ -1
SCARB1-209ENST00000545305 Q8NDZ9 215 aa8.83□□□□□ -1
SCARB1-209ENST00000545305 FRAS1Q86XX4 4008 aa8.82□□□□□ -1
SCARB1-209ENST00000545305 FUSP35637 526 aaKnown RBP eCLIP8.82□□□□□ -12e-9■□□□□ 9.6
SCARB1-209ENST00000545305 PRR3P79522 188 aaKnown RBP8.82□□□□□ -1
SCARB1-209ENST00000545305 C9orf118A6NHY6 69 aa8.81□□□□□ -1
SCARB1-209ENST00000545305 M0R378 163 aa8.81□□□□□ -1
SCARB1-209ENST00000545305 TSPAN13O95857 204 aa8.81□□□□□ -1
SCARB1-209ENST00000545305 SERTAD4-AS1Q5TG53 156 aa8.81□□□□□ -1
SCARB1-209ENST00000545305 FAM19A5Q7Z5A7 132 aaPredicted RBP8.81□□□□□ -1
SCARB1-209ENST00000545305 TMEM126AQ9H061 195 aa8.81□□□□□ -1
SCARB1-209ENST00000545305 IGLV5-37A0A075B6J1 123 aa8.8□□□□□ -1
SCARB1-209ENST00000545305 CHTF8P0CG12 524 aa8.8□□□□□ -1
SCARB1-209ENST00000545305 FAM168BA1KXE4 195 aa8.79□□□□□ -1
SCARB1-209ENST00000545305 H3BUT2 72 aa8.79□□□□□ -1
SCARB1-209ENST00000545305 PSMB2P49721 201 aa8.79□□□□□ -1
SCARB1-209ENST00000545305 KRTAP10-2P60368 255 aa8.79□□□□□ -1
SCARB1-209ENST00000545305 NAA38Q9BRA0 125 aaKnown RBP8.79□□□□□ -1
SCARB1-209ENST00000545305 DPH3Q96FX2 82 aa8.78□□□□□ -1
SCARB1-209ENST00000545305 CBY1Q9Y3M2 126 aa8.78□□□□□ -1
SCARB1-209ENST00000545305 RYR2Q92736 4967 aa8.78□□□□□ -1
SCARB1-209ENST00000545305 M0QXV9 152 aa8.77□□□□□ -1.01
SCARB1-209ENST00000545305 LYRM7Q5U5X0 104 aa8.77□□□□□ -1.01
SCARB1-209ENST00000545305 SPACA4Q8TDM5 124 aa8.77□□□□□ -1.01
SCARB1-209ENST00000545305 TRBV10-3A0A0K0K1G6 114 aa8.76□□□□□ -1.01
SCARB1-209ENST00000545305 IGLV6-57P01721 117 aa8.76□□□□□ -1.01
SCARB1-209ENST00000545305 C7orf33Q8WU49 177 aa8.76□□□□□ -1.01
SCARB1-209ENST00000545305 C22orf24Q9Y442 160 aa8.76□□□□□ -1.01
SCARB1-209ENST00000545305 A0A1W2PPM0 123 aa8.75□□□□□ -1.01
SCARB1-209ENST00000545305 GAGE10A6NGK3 116 aa8.75□□□□□ -1.01
SCARB1-209ENST00000545305 COX6CP09669 75 aa8.75□□□□□ -1.01
SCARB1-209ENST00000545305 FABP2P12104 132 aa8.75□□□□□ -1.01
SCARB1-209ENST00000545305 MRPL55Q7Z7F7 128 aaKnown RBP8.75□□□□□ -1.01
SCARB1-209ENST00000545305 SMIM11BQ8TCY0 68 aa8.75□□□□□ -1.01
SCARB1-209ENST00000545305 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP8.75□□□□□ -1.01
SCARB1-209ENST00000545305 TRAV23DV6A0A075B6W5 121 aa8.74□□□□□ -1.01
SCARB1-209ENST00000545305 A0A1W2PNN7 141 aa8.74□□□□□ -1.01
SCARB1-209ENST00000545305 SCGB1C2P0DMR2 95 aa8.74□□□□□ -1.01
SCARB1-209ENST00000545305 RPL28P46779 137 aaKnown RBP8.74□□□□□ -1.01
SCARB1-209ENST00000545305 KRTAP7-1Q8IUC3 87 aa8.74□□□□□ -1.01
SCARB1-209ENST00000545305 PANO1I0J062 215 aa8.73□□□□□ -1.01
SCARB1-209ENST00000545305 TRIAP1O43715 76 aa8.73□□□□□ -1.01
SCARB1-209ENST00000545305 HECTD4Q9Y4D8 3996 aa8.72□□□□□ -1.01
SCARB1-209ENST00000545305 FAT2Q9NYQ8 4349 aa8.72□□□□□ -1.01
SCARB1-209ENST00000545305 VAMP3Q15836 100 aa8.72□□□□□ -1.01
SCARB1-209ENST00000545305 LINC00167Q96N53 147 aa8.72□□□□□ -1.01
SCARB1-209ENST00000545305 KMT2CQ8NEZ4 4911 aaKnown RBP8.71□□□□□ -1.01
SCARB1-209ENST00000545305 A0A087WYN8 130 aa8.71□□□□□ -1.02
SCARB1-209ENST00000545305 A0A1B0GV90 55 aa8.71□□□□□ -1.02
SCARB1-209ENST00000545305 DIRC1Q969H9 104 aa8.71□□□□□ -1.02
SCARB1-209ENST00000545305 DNAH11Q96DT5 4516 aa8.71□□□□□ -1.02
SCARB1-209ENST00000545305 IGLV1-50A0A075B6I6 118 aa8.7□□□□□ -1.02
SCARB1-209ENST00000545305 RPL37AP8A6NKH3 93 aa8.7□□□□□ -1.02
SCARB1-209ENST00000545305 PRYO14603 147 aa8.7□□□□□ -1.02
SCARB1-209ENST00000545305 UBE2BP63146 152 aa8.7□□□□□ -1.02
SCARB1-209ENST00000545305 A0A1B0GVY2 172 aa8.69□□□□□ -1.02
SCARB1-209ENST00000545305 ZNF73O43830 326 aaPredicted RBP8.69□□□□□ -1.02
SCARB1-209ENST00000545305 KRTAP10-1P60331 282 aa8.69□□□□□ -1.02
SCARB1-209ENST00000545305 C6orf99Q4VX62 202 aa8.69□□□□□ -1.02
SCARB1-209ENST00000545305 PHF5AQ7RTV0 110 aaKnown RBP8.69□□□□□ -1.02
SCARB1-209ENST00000545305 KCNQ1DNQ9H478 68 aa8.69□□□□□ -1.02
SCARB1-209ENST00000545305 PLAC8Q9NZF1 115 aa8.69□□□□□ -1.02
SCARB1-209ENST00000545305 SPCS1Q9Y6A9 102 aa8.69□□□□□ -1.02
SCARB1-209ENST00000545305 TRBV20-1A0A075B6N2 111 aa8.67□□□□□ -1.02
SCARB1-209ENST00000545305 EPM2AB3EWF7 344 aa8.67□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 102.8 ms