RNA–Protein interactions for RNA: ENST00000544336.5

PDCD2-211, Transcript of programmed cell death 2, humanhuman

TSL 1 (best)

Gene PDCD2, Length 1,164 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDCD2-211ENST00000544336 TPRXLQ17RH7 258 aa15.83■□□□□ 0.12
PDCD2-211ENST00000544336 TMEM170BQ5T4T1 132 aa15.83■□□□□ 0.12
PDCD2-211ENST00000544336 LINC00614P0C842 121 aa15.82■□□□□ 0.12
PDCD2-211ENST00000544336 C18orf32Q8TCD1 76 aa15.82■□□□□ 0.12
PDCD2-211ENST00000544336 RPS10P5Q9NQ39 176 aa15.82■□□□□ 0.12
PDCD2-211ENST00000544336 LCE2AQ5TA79 106 aaPredicted RBP15.81■□□□□ 0.12
PDCD2-211ENST00000544336 BAGE3Q86Y29 109 aa15.81■□□□□ 0.12
PDCD2-211ENST00000544336 IFITM2Q01629 132 aa15.8■□□□□ 0.12
PDCD2-211ENST00000544336 LINC00158P58513 81 aa15.79■□□□□ 0.12
PDCD2-211ENST00000544336 TRAPPC1Q9Y5R8 145 aa15.79■□□□□ 0.12
PDCD2-211ENST00000544336 A0A0U1RRA0 63 aa15.78■□□□□ 0.12
PDCD2-211ENST00000544336 COMMD7Q86VX2 200 aa15.78■□□□□ 0.12
PDCD2-211ENST00000544336 MUC17Q685J3 4493 aa15.78■□□□□ 0.12
PDCD2-211ENST00000544336 RHEBQ15382 184 aa15.76■□□□□ 0.11
PDCD2-211ENST00000544336 SFTA2Q6UW10 78 aa15.76■□□□□ 0.11
PDCD2-211ENST00000544336 PPDPFQ9H3Y8 114 aa15.75■□□□□ 0.11
PDCD2-211ENST00000544336 CTAG1AP78358 180 aa15.74■□□□□ 0.11
PDCD2-211ENST00000544336 SPRR4Q96PI1 79 aa15.74■□□□□ 0.11
PDCD2-211ENST00000544336 CHTOPQ9Y3Y2 248 aaKnown RBP15.73■□□□□ 0.11
PDCD2-211ENST00000544336 C10orf91Q5T1B1 145 aa15.72■□□□□ 0.11
PDCD2-211ENST00000544336 SPAG11AQ6PDA7 123 aa15.69■□□□□ 0.1
PDCD2-211ENST00000544336 TMEM223A0PJW6 202 aa15.67■□□□□ 0.1
PDCD2-211ENST00000544336 NCR3O14931 201 aa15.67■□□□□ 0.1
PDCD2-211ENST00000544336 ATP6V1G1O75348 118 aa15.67■□□□□ 0.1
PDCD2-211ENST00000544336 SMIM13P0DJ93 91 aa15.67■□□□□ 0.1
PDCD2-211ENST00000544336 C4orf48Q5BLP8 95 aa15.67■□□□□ 0.1
PDCD2-211ENST00000544336 ZNF706Q9Y5V0 76 aaPredicted RBP15.67■□□□□ 0.1
PDCD2-211ENST00000544336 DAND5Q8N907 189 aa15.66■□□□□ 0.1
PDCD2-211ENST00000544336 BOD1L2Q8IYS8 172 aa15.65■□□□□ 0.1
PDCD2-211ENST00000544336 PRYO14603 147 aa15.64■□□□□ 0.09
PDCD2-211ENST00000544336 MEIG1Q5JSS6 88 aa15.64■□□□□ 0.09
PDCD2-211ENST00000544336 Q8NBF4 154 aa15.63■□□□□ 0.09
PDCD2-211ENST00000544336 MIR7-3HGQ8N6C7 128 aa15.61■□□□□ 0.09
PDCD2-211ENST00000544336 SMCR5Q8TEV8 140 aa15.61■□□□□ 0.09
PDCD2-211ENST00000544336 FP248Q71RG6 208 aaPredicted RBP15.6■□□□□ 0.09
PDCD2-211ENST00000544336 IFI27L1Q96BM0 104 aa15.6■□□□□ 0.09
PDCD2-211ENST00000544336 TRAV12-1A0A0B4J245 112 aa15.58■□□□□ 0.08
PDCD2-211ENST00000544336 ETDCA0A1B0GVM5 59 aa15.58■□□□□ 0.08
PDCD2-211ENST00000544336 LINC00337Q8N6G1 96 aa15.58■□□□□ 0.08
PDCD2-211ENST00000544336 KCNQ1DNQ9H478 68 aa15.57■□□□□ 0.08
PDCD2-211ENST00000544336 SPRR1AP35321 89 aa15.56■□□□□ 0.08
PDCD2-211ENST00000544336 TRBV10-3A0A0K0K1G6 114 aa15.55■□□□□ 0.08
PDCD2-211ENST00000544336 APOC3P02656 99 aa15.55■□□□□ 0.08
PDCD2-211ENST00000544336 CHCHD1Q96BP2 118 aaKnown RBP15.54■□□□□ 0.08
PDCD2-211ENST00000544336 KRTAP4-16G5E9R7 235 aaPredicted RBP15.53■□□□□ 0.08
PDCD2-211ENST00000544336 HERV-K104P63124 156 aa15.53■□□□□ 0.08
PDCD2-211ENST00000544336 KRTAP13-3Q3SY46 172 aa15.53■□□□□ 0.08
PDCD2-211ENST00000544336 NDUFA12Q9UI09 145 aa15.53■□□□□ 0.08
PDCD2-211ENST00000544336 GAGE2AQ6NT46 116 aa15.51■□□□□ 0.07
PDCD2-211ENST00000544336 SPINK1P00995 79 aa15.49■□□□□ 0.07
PDCD2-211ENST00000544336 IGLV9-49A0A0B4J1Y8 123 aa15.48■□□□□ 0.07
PDCD2-211ENST00000544336 MYMXA0A1B0GTQ4 84 aa15.48■□□□□ 0.07
PDCD2-211ENST00000544336 H0Y8G0 127 aa15.48■□□□□ 0.07
PDCD2-211ENST00000544336 SNAPINO95295 136 aa15.48■□□□□ 0.07
PDCD2-211ENST00000544336 LINC00483Q53H64 154 aa15.48■□□□□ 0.07
PDCD2-211ENST00000544336 LINC00587B1AMM8 73 aa15.47■□□□□ 0.07
PDCD2-211ENST00000544336 S100A12P80511 92 aa15.47■□□□□ 0.07
PDCD2-211ENST00000544336 FAM19A2Q8N3H0 131 aa15.47■□□□□ 0.07
PDCD2-211ENST00000544336 MAP1LC3CQ9BXW4 147 aa15.47■□□□□ 0.07
PDCD2-211ENST00000544336 B5MCH6 92 aa15.46■□□□□ 0.07
PDCD2-211ENST00000544336 ERC2-IT1O76042 136 aa15.46■□□□□ 0.07
PDCD2-211ENST00000544336 MOBPQ13875 183 aa15.46■□□□□ 0.07
PDCD2-211ENST00000544336 SVBPQ8N300 66 aa15.45■□□□□ 0.06
PDCD2-211ENST00000544336 TSPEAR-AS2P59090 65 aa15.44■□□□□ 0.06
PDCD2-211ENST00000544336 NDUFA5Q16718 116 aa15.44■□□□□ 0.06
PDCD2-211ENST00000544336 ASB16-AS1Q495Z4 193 aa15.44■□□□□ 0.06
PDCD2-211ENST00000544336 KRTAP9-6A0A140TA67 174 aa15.43■□□□□ 0.06
PDCD2-211ENST00000544336 HSBP1O75506 76 aa15.43■□□□□ 0.06
PDCD2-211ENST00000544336 DDTP30046 118 aa15.42■□□□□ 0.06
PDCD2-211ENST00000544336 YPEL4Q96NS1 127 aa15.41■□□□□ 0.06
PDCD2-211ENST00000544336 Q9BRP9 147 aa15.39■□□□□ 0.05
PDCD2-211ENST00000544336 KRTAP4-1Q9BYQ7 146 aa15.39■□□□□ 0.05
PDCD2-211ENST00000544336 LEPROTO15243 131 aa15.38■□□□□ 0.05
PDCD2-211ENST00000544336 Q8N377 158 aa15.37■□□□□ 0.05
PDCD2-211ENST00000544336 SEC61BP60468 96 aaKnown RBP15.36■□□□□ 0.05
PDCD2-211ENST00000544336 SSBP3-AS1Q7Z2R9 100 aa15.36■□□□□ 0.05
PDCD2-211ENST00000544336 LOC107984156A0A0G2JMH3 177 aa15.35■□□□□ 0.05
PDCD2-211ENST00000544336 TRBV10-2A0A0K0K1G8 114 aa15.35■□□□□ 0.05
PDCD2-211ENST00000544336 Q6ZRX8 168 aa15.35■□□□□ 0.05
PDCD2-211ENST00000544336 ARL17AQ8IVW1 177 aa15.35■□□□□ 0.05
PDCD2-211ENST00000544336 LINC01547P58512 204 aaPredicted RBP15.34■□□□□ 0.05
PDCD2-211ENST00000544336 RPS29P62273 56 aaKnown RBP15.33■□□□□ 0.04
PDCD2-211ENST00000544336 MIEN1Q9BRT3 115 aa15.33■□□□□ 0.04
PDCD2-211ENST00000544336 SPANXB1Q9NS25 103 aaPredicted RBP15.33■□□□□ 0.04
PDCD2-211ENST00000544336 J3QQQ9 107 aa15.32■□□□□ 0.04
PDCD2-211ENST00000544336 LEPROTL1O95214 131 aa15.32■□□□□ 0.04
PDCD2-211ENST00000544336 S100A7L2Q5SY68 101 aa15.32■□□□□ 0.04
PDCD2-211ENST00000544336 SLC25A20O43772 301 aa15.3■□□□□ 0.04
PDCD2-211ENST00000544336 PLNP26678 52 aa15.3■□□□□ 0.04
PDCD2-211ENST00000544336 C9orf153Q5TBE3 101 aa15.3■□□□□ 0.04
PDCD2-211ENST00000544336 PMCHL2Q9BQD1 86 aa15.29■□□□□ 0.04
PDCD2-211ENST00000544336 LGALS3P17931 250 aaKnown RBP15.28■□□□□ 0.04
PDCD2-211ENST00000544336 TRAV23DV6A0A075B6W5 121 aa15.27■□□□□ 0.04
PDCD2-211ENST00000544336 SERF1AO75920 110 aa15.27■□□□□ 0.04
PDCD2-211ENST00000544336 IGLV6-57P01721 117 aa15.27■□□□□ 0.04
PDCD2-211ENST00000544336 HERVK_113P61574 105 aa15.27■□□□□ 0.04
PDCD2-211ENST00000544336 NPC2P61916 151 aa15.27■□□□□ 0.04
PDCD2-211ENST00000544336 DPM2O94777 84 aa15.26■□□□□ 0.03
PDCD2-211ENST00000544336 TRGC2P03986 189 aa15.26■□□□□ 0.03
PDCD2-211ENST00000544336 LINC00310P59036 64 aa15.26■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 79.1 ms