RNA–Protein interactions for RNA: ENST00000544052.6

SCFD1-207, Transcript of sec1 family domain containing 1, humanhuman

TSL 2 BASIC

Gene SCFD1, Length 2,058 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-207ENST00000544052 XAGE1AQ9HD64 81 aa1.65□□□□□ -2.15
SCFD1-207ENST00000544052 PSENENQ9NZ42 101 aa1.65□□□□□ -2.15
SCFD1-207ENST00000544052 IGKV2-40A0A087WW87 121 aaPredicted RBP1.64□□□□□ -2.15
SCFD1-207ENST00000544052 TRAV12-3A0A0B4J271 114 aa1.64□□□□□ -2.15
SCFD1-207ENST00000544052 SPINK4O60575 86 aa1.64□□□□□ -2.15
SCFD1-207ENST00000544052 HYPMO75409 117 aa1.64□□□□□ -2.15
SCFD1-207ENST00000544052 IGKV2D-40P01614 121 aaPredicted RBP1.64□□□□□ -2.15
SCFD1-207ENST00000544052 IL7P13232 177 aa1.64□□□□□ -2.15
SCFD1-207ENST00000544052 WFDC2Q14508 124 aa1.64□□□□□ -2.15
SCFD1-207ENST00000544052 CIB3Q96Q77 187 aaPredicted RBP1.64□□□□□ -2.15
SCFD1-207ENST00000544052 NPCDR1Q9BY65 106 aa1.64□□□□□ -2.15
SCFD1-207ENST00000544052 AGPAT4-IT1Q9H0P7 198 aa1.64□□□□□ -2.15
SCFD1-207ENST00000544052 NPVFQ9HCQ7 196 aa1.64□□□□□ -2.15
SCFD1-207ENST00000544052 SPANXA1Q9NS26 97 aa1.64□□□□□ -2.15
SCFD1-207ENST00000544052 TNFSF18Q9UNG2 199 aa1.64□□□□□ -2.15
SCFD1-207ENST00000544052 TIMM8BQ9Y5J9 83 aaPredicted RBP1.64□□□□□ -2.15
SCFD1-207ENST00000544052 SRRM2Q9UQ35 2752 aaKnown RBP1.63□□□□□ -2.15
SCFD1-207ENST00000544052 TRGV4A0A0C4DH28 118 aa1.63□□□□□ -2.15
SCFD1-207ENST00000544052 MUC21A0A0G2JKD1 596 aa1.63□□□□□ -2.15
SCFD1-207ENST00000544052 MUC21A0A140T8X8 626 aa1.63□□□□□ -2.15
SCFD1-207ENST00000544052 H3BNG1 76 aa1.63□□□□□ -2.15
SCFD1-207ENST00000544052 CST7O76096 145 aa1.63□□□□□ -2.15
SCFD1-207ENST00000544052 CFDP00746 253 aaPredicted RBP1.63□□□□□ -2.15
SCFD1-207ENST00000544052 HBBP68871 147 aa1.63□□□□□ -2.15
SCFD1-207ENST00000544052 LCN15Q6UWW0 184 aa1.63□□□□□ -2.15
SCFD1-207ENST00000544052 WFDC10BQ8IUB3 73 aa1.63□□□□□ -2.15
SCFD1-207ENST00000544052 Q8TAT8 98 aa1.63□□□□□ -2.15
SCFD1-207ENST00000544052 ODF3Q96PU9 254 aa1.63□□□□□ -2.15
SCFD1-207ENST00000544052 CACFD1Q9UGQ2 172 aa1.63□□□□□ -2.15
SCFD1-207ENST00000544052 TRAV7A0A075B6U4 112 aa1.63□□□□□ -2.15
SCFD1-207ENST00000544052 A0A087WTM6 91 aa1.63□□□□□ -2.15
SCFD1-207ENST00000544052 BORCS7-ASMTA0A0B4J1R7 106 aa1.63□□□□□ -2.15
SCFD1-207ENST00000544052 UBE2L5PA0A1B0GUS4 154 aa1.63□□□□□ -2.15
SCFD1-207ENST00000544052 C7orf71A4D174 169 aa1.63□□□□□ -2.15
SCFD1-207ENST00000544052 SFTA3P0C7M3 94 aa1.63□□□□□ -2.15
SCFD1-207ENST00000544052 LINC00694P0DN24 101 aa1.63□□□□□ -2.15
SCFD1-207ENST00000544052 FAUP35544 74 aaKnown RBP1.63□□□□□ -2.15
SCFD1-207ENST00000544052 KRTAP10-4P60372 401 aaPredicted RBP1.63□□□□□ -2.15
SCFD1-207ENST00000544052 C10orf113Q5VZT2 155 aa1.63□□□□□ -2.15
SCFD1-207ENST00000544052 LYPD5Q6UWN5 251 aa1.63□□□□□ -2.15
SCFD1-207ENST00000544052 TCTE3Q8IZS6 198 aa1.63□□□□□ -2.15
SCFD1-207ENST00000544052 LINC00467Q9BRT7 94 aa1.63□□□□□ -2.15
SCFD1-207ENST00000544052 SLC50A1Q9BRV3 221 aa1.63□□□□□ -2.15
SCFD1-207ENST00000544052 OR5AC2Q9NZP5 309 aa1.63□□□□□ -2.15
SCFD1-207ENST00000544052 TNXBP22105 4242 aa1.62□□□□□ -2.15
SCFD1-207ENST00000544052 TRGV1A0A0A0MS02 117 aa1.62□□□□□ -2.15
SCFD1-207ENST00000544052 NAP1L6A6NFF2 107 aa1.62□□□□□ -2.15
SCFD1-207ENST00000544052 DLEU1O43261 78 aa1.62□□□□□ -2.15
SCFD1-207ENST00000544052 LYRM1O43325 122 aa1.62□□□□□ -2.15
SCFD1-207ENST00000544052 SIX6O95475 246 aa1.62□□□□□ -2.15
SCFD1-207ENST00000544052 SMR3BP02814 79 aaPredicted RBP1.62□□□□□ -2.15
SCFD1-207ENST00000544052 CCL18P55774 89 aa1.62□□□□□ -2.15
SCFD1-207ENST00000544052 HIST1H4AP62805 103 aaKnown RBP1.62□□□□□ -2.15
SCFD1-207ENST00000544052 KHDC3LQ587J8 217 aa1.62□□□□□ -2.15
SCFD1-207ENST00000544052 Q5VSD8 79 aa1.62□□□□□ -2.15
SCFD1-207ENST00000544052 DPPA3Q6W0C5 159 aa1.62□□□□□ -2.15
SCFD1-207ENST00000544052 PRADC1Q9BSG0 188 aa1.62□□□□□ -2.15
SCFD1-207ENST00000544052 GGACTQ9BVM4 153 aa1.62□□□□□ -2.15
SCFD1-207ENST00000544052 TMEM14CQ9P0S9 112 aa1.62□□□□□ -2.15
SCFD1-207ENST00000544052 LAMTOR3Q9UHA4 124 aa1.62□□□□□ -2.15
SCFD1-207ENST00000544052 TIMM9Q9Y5J7 89 aa1.62□□□□□ -2.15
SCFD1-207ENST00000544052 SLC25A5P05141 298 aaKnown RBP1.62□□□□□ -2.15
SCFD1-207ENST00000544052 FGF7P21781 194 aa1.62□□□□□ -2.15
SCFD1-207ENST00000544052 A0A0G2JQZ4 141 aa1.61□□□□□ -2.15
SCFD1-207ENST00000544052 F6UZH7 168 aa1.61□□□□□ -2.15
SCFD1-207ENST00000544052 H7C2G1 150 aa1.61□□□□□ -2.15
SCFD1-207ENST00000544052 DPM2O94777 84 aa1.61□□□□□ -2.15
SCFD1-207ENST00000544052 TCRAP04437 139 aa1.61□□□□□ -2.15
SCFD1-207ENST00000544052 IGLC6P0CF74 106 aa1.61□□□□□ -2.15
SCFD1-207ENST00000544052 HINT1P49773 126 aaPredicted RBP1.61□□□□□ -2.15
SCFD1-207ENST00000544052 FOXA3P55318 350 aaPredicted RBP1.61□□□□□ -2.15
SCFD1-207ENST00000544052 S100A10P60903 97 aa1.61□□□□□ -2.15
SCFD1-207ENST00000544052 Q6AWC8 147 aa1.61□□□□□ -2.15
SCFD1-207ENST00000544052 PHF5AQ7RTV0 110 aaKnown RBP1.61□□□□□ -2.15
SCFD1-207ENST00000544052 AP1S3Q96PC3 154 aa1.61□□□□□ -2.15
SCFD1-207ENST00000544052 ERG28Q9UKR5 140 aa1.61□□□□□ -2.15
SCFD1-207ENST00000544052 TRGV2A0A075B6R0 118 aa1.6□□□□□ -2.15
SCFD1-207ENST00000544052 TRAV13-1A0A0B4J241 112 aa1.6□□□□□ -2.15
SCFD1-207ENST00000544052 IGHV1-58A0A0C4DH39 117 aa1.6□□□□□ -2.15
SCFD1-207ENST00000544052 H3BMG7 143 aa1.6□□□□□ -2.15
SCFD1-207ENST00000544052 MT-ND6P03923 174 aa1.6□□□□□ -2.15
SCFD1-207ENST00000544052 PDE6HQ13956 83 aa1.6□□□□□ -2.15
SCFD1-207ENST00000544052 TDRG1Q3Y452 100 aa1.6□□□□□ -2.15
SCFD1-207ENST00000544052 EIF5AL1Q6IS14 154 aaKnown RBP1.6□□□□□ -2.15
SCFD1-207ENST00000544052 Q6ZQT0 140 aa1.6□□□□□ -2.15
SCFD1-207ENST00000544052 Q6ZSA8 131 aa1.6□□□□□ -2.15
SCFD1-207ENST00000544052 Q9BRP9 147 aa1.6□□□□□ -2.15
SCFD1-207ENST00000544052 C2orf88Q9BSF0 95 aa1.6□□□□□ -2.15
SCFD1-207ENST00000544052 PRO0255Q9UI72 69 aa1.6□□□□□ -2.15
SCFD1-207ENST00000544052 PIGBOS1A0A0B4J2F0 54 aa1.6□□□□□ -2.15
SCFD1-207ENST00000544052 TRBV7-6A0A0J9YX20 115 aa1.6□□□□□ -2.15
SCFD1-207ENST00000544052 RBAKDNA6NC62 111 aa1.6□□□□□ -2.15
SCFD1-207ENST00000544052 GPX1P07203 203 aa1.6□□□□□ -2.15
SCFD1-207ENST00000544052 NMBP08949 121 aa1.6□□□□□ -2.15
SCFD1-207ENST00000544052 RNASE3P12724 160 aaKnown RBP1.6□□□□□ -2.15
SCFD1-207ENST00000544052 RPL35P42766 123 aaKnown RBP1.6□□□□□ -2.15
SCFD1-207ENST00000544052 HHLA3Q9XRX5 114 aa1.6□□□□□ -2.15
SCFD1-207ENST00000544052 LRP2P98164 4655 aa1.6□□□□□ -2.15
SCFD1-207ENST00000544052 TRBV10-2A0A0K0K1G8 114 aa1.59□□□□□ -2.15
SCFD1-207ENST00000544052 FAM236AA0A1B0GUQ0 79 aa1.59□□□□□ -2.15
Retrieved 100 of 20,778 RNA–protein pairs in 92.6 ms