RNA–Protein interactions for RNA: ENST00000543359.5

TNFRSF1A-215, Transcript of TNF receptor superfamily member 1A, humanhuman

TSL 3

Gene TNFRSF1A, Length 627 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1A-215ENST00000543359 IGKV2D-28P01615 120 aa7.74□□□□□ -1.17
TNFRSF1A-215ENST00000543359 FAM19A2Q8N3H0 131 aa7.74□□□□□ -1.17
TNFRSF1A-215ENST00000543359 TRGC2P03986 189 aa7.73□□□□□ -1.17
TNFRSF1A-215ENST00000543359 SFTA2Q6UW10 78 aa7.73□□□□□ -1.17
TNFRSF1A-215ENST00000543359 TMEM238C9JI98 176 aa7.72□□□□□ -1.17
TNFRSF1A-215ENST00000543359 ANAPC11Q9NYG5 84 aa7.72□□□□□ -1.17
TNFRSF1A-215ENST00000543359 M0R378 163 aa7.71□□□□□ -1.18
TNFRSF1A-215ENST00000543359 RPL24P83731 157 aaKnown RBP7.71□□□□□ -1.18
TNFRSF1A-215ENST00000543359 KRTAP13-2Q52LG2 175 aa7.71□□□□□ -1.18
TNFRSF1A-215ENST00000543359 TMEM126AQ9H061 195 aa7.71□□□□□ -1.18
TNFRSF1A-215ENST00000543359 MUC2Q02817 5179 aa7.71□□□□□ -1.18
TNFRSF1A-215ENST00000543359 HSBP1O75506 76 aa7.7□□□□□ -1.18
TNFRSF1A-215ENST00000543359 LINC00158P58513 81 aa7.7□□□□□ -1.18
TNFRSF1A-215ENST00000543359 COLCA2A8K830 154 aa7.69□□□□□ -1.18
TNFRSF1A-215ENST00000543359 SERF1AO75920 110 aa7.69□□□□□ -1.18
TNFRSF1A-215ENST00000543359 CRYGAP11844 174 aa7.69□□□□□ -1.18
TNFRSF1A-215ENST00000543359 UBE2AP49459 152 aa7.69□□□□□ -1.18
TNFRSF1A-215ENST00000543359 PRLHP81277 87 aa7.69□□□□□ -1.18
TNFRSF1A-215ENST00000543359 A0A0U1RRA0 63 aa7.68□□□□□ -1.18
TNFRSF1A-215ENST00000543359 SMIM13P0DJ93 91 aa7.68□□□□□ -1.18
TNFRSF1A-215ENST00000543359 FAM229BQ4G0N7 80 aa7.68□□□□□ -1.18
TNFRSF1A-215ENST00000543359 LEPROTL1O95214 131 aa7.66□□□□□ -1.18
TNFRSF1A-215ENST00000543359 TSPEAR-AS2P59090 65 aa7.66□□□□□ -1.18
TNFRSF1A-215ENST00000543359 FAM19A1Q7Z5A9 133 aa7.66□□□□□ -1.18
TNFRSF1A-215ENST00000543359 TYMSOSQ8TAI1 123 aa7.66□□□□□ -1.18
TNFRSF1A-215ENST00000543359 MUC17Q685J3 4493 aa7.66□□□□□ -1.18
TNFRSF1A-215ENST00000543359 TSPAN13O95857 204 aa7.65□□□□□ -1.18
TNFRSF1A-215ENST00000543359 MIR7-3HGQ8N6C7 128 aa7.65□□□□□ -1.18
TNFRSF1A-215ENST00000543359 PLEKHB2Q96CS7 222 aa7.65□□□□□ -1.18
TNFRSF1A-215ENST00000543359 NDUFA12Q9UI09 145 aa7.65□□□□□ -1.18
TNFRSF1A-215ENST00000543359 HERV-K104P63124 156 aa7.64□□□□□ -1.19
TNFRSF1A-215ENST00000543359 H0Y8G0 127 aa7.63□□□□□ -1.19
TNFRSF1A-215ENST00000543359 LEPROTO15243 131 aa7.63□□□□□ -1.19
TNFRSF1A-215ENST00000543359 PRR4Q16378 134 aa7.63□□□□□ -1.19
TNFRSF1A-215ENST00000543359 BOD1L2Q8IYS8 172 aa7.63□□□□□ -1.19
TNFRSF1A-215ENST00000543359 LOC107984156A0A0G2JMH3 177 aa7.62□□□□□ -1.19
TNFRSF1A-215ENST00000543359 MYMXA0A1B0GTQ4 84 aa7.62□□□□□ -1.19
TNFRSF1A-215ENST00000543359 KRTAP4-16G5E9R7 235 aaPredicted RBP7.62□□□□□ -1.19
TNFRSF1A-215ENST00000543359 FABP4P15090 132 aa7.62□□□□□ -1.19
TNFRSF1A-215ENST00000543359 SPRR1AP35321 89 aa7.62□□□□□ -1.19
TNFRSF1A-215ENST00000543359 MEIG1Q5JSS6 88 aa7.62□□□□□ -1.19
TNFRSF1A-215ENST00000543359 ARL17AQ8IVW1 177 aa7.62□□□□□ -1.19
TNFRSF1A-215ENST00000543359 HSPB8Q9UJY1 196 aa7.62□□□□□ -1.19
TNFRSF1A-215ENST00000543359 IGKV2D-26A0A0A0MRZ7 120 aa7.61□□□□□ -1.19
TNFRSF1A-215ENST00000543359 LINC00587B1AMM8 73 aa7.61□□□□□ -1.19
TNFRSF1A-215ENST00000543359 PLNP26678 52 aa7.61□□□□□ -1.19
TNFRSF1A-215ENST00000543359 KCNQ1DNQ9H478 68 aa7.61□□□□□ -1.19
TNFRSF1A-215ENST00000543359 PRYO14603 147 aa7.6□□□□□ -1.19
TNFRSF1A-215ENST00000543359 DPM2O94777 84 aa7.6□□□□□ -1.19
TNFRSF1A-215ENST00000543359 PMCHL2Q9BQD1 86 aa7.6□□□□□ -1.19
TNFRSF1A-215ENST00000543359 TRBV10-3A0A0K0K1G6 114 aa7.59□□□□□ -1.19
TNFRSF1A-215ENST00000543359 J3QQQ9 107 aa7.59□□□□□ -1.19
TNFRSF1A-215ENST00000543359 NCR3O14931 201 aa7.59□□□□□ -1.19
TNFRSF1A-215ENST00000543359 LINC00337Q8N6G1 96 aa7.59□□□□□ -1.19
TNFRSF1A-215ENST00000543359 DAND5Q8N907 189 aa7.59□□□□□ -1.19
TNFRSF1A-215ENST00000543359 LINC00304Q8N9R0 145 aa7.59□□□□□ -1.19
TNFRSF1A-215ENST00000543359 SPRR4Q96PI1 79 aa7.59□□□□□ -1.19
TNFRSF1A-215ENST00000543359 HIGD2AQ9BW72 106 aa7.59□□□□□ -1.19
TNFRSF1A-215ENST00000543359 IGKCP01834 107 aa7.58□□□□□ -1.2
TNFRSF1A-215ENST00000543359 C3orf22Q8N5N4 141 aa7.58□□□□□ -1.2
TNFRSF1A-215ENST00000543359 MAP1LC3CQ9BXW4 147 aa7.58□□□□□ -1.2
TNFRSF1A-215ENST00000543359 NMUP48645 174 aa7.57□□□□□ -1.2
TNFRSF1A-215ENST00000543359 HIST1H2BKO60814 126 aa7.56□□□□□ -1.2
TNFRSF1A-215ENST00000543359 HIST1H2BJP06899 126 aa7.56□□□□□ -1.2
TNFRSF1A-215ENST00000543359 HIST1H2BOP23527 126 aa7.56□□□□□ -1.2
TNFRSF1A-215ENST00000543359 HIST1H2BBP33778 126 aa7.56□□□□□ -1.2
TNFRSF1A-215ENST00000543359 HIST1H2BDP58876 126 aa7.56□□□□□ -1.2
TNFRSF1A-215ENST00000543359 HIST1H2BCP62807 126 aa7.56□□□□□ -1.2
TNFRSF1A-215ENST00000543359 HIST2H2BEQ16778 126 aa7.56□□□□□ -1.2
TNFRSF1A-215ENST00000543359 HIST2H2BFQ5QNW6 126 aaPredicted RBP7.56□□□□□ -1.2
TNFRSF1A-215ENST00000543359 SMCR5Q8TEV8 140 aa7.56□□□□□ -1.2
TNFRSF1A-215ENST00000543359 HIST1H2BHQ93079 126 aa7.56□□□□□ -1.2
TNFRSF1A-215ENST00000543359 HIST1H2BNQ99877 126 aa7.56□□□□□ -1.2
TNFRSF1A-215ENST00000543359 HIST1H2BMQ99879 126 aa7.56□□□□□ -1.2
TNFRSF1A-215ENST00000543359 TRBV10-2A0A0K0K1G8 114 aa7.55□□□□□ -1.2
TNFRSF1A-215ENST00000543359 EIF4EBP3O60516 100 aaPredicted RBP7.55□□□□□ -1.2
TNFRSF1A-215ENST00000543359 HERVK_113P61574 105 aa7.55□□□□□ -1.2
TNFRSF1A-215ENST00000543359 CTAG1AP78358 180 aa7.55□□□□□ -1.2
TNFRSF1A-215ENST00000543359 ADAMTSL4-AS1Q5T5F5 129 aa7.55□□□□□ -1.2
TNFRSF1A-215ENST00000543359 B5MCH6 92 aa7.54□□□□□ -1.2
TNFRSF1A-215ENST00000543359 SOSTDC1Q6X4U4 206 aa7.54□□□□□ -1.2
TNFRSF1A-215ENST00000543359 RETNLBQ9BQ08 111 aa7.54□□□□□ -1.2
TNFRSF1A-215ENST00000543359 A0A0J9YXY3 114 aa7.53□□□□□ -1.2
TNFRSF1A-215ENST00000543359 E9PLD3 99 aa7.53□□□□□ -1.2
TNFRSF1A-215ENST00000543359 SYS1-DBNDD2H3BUS1 97 aa7.53□□□□□ -1.2
TNFRSF1A-215ENST00000543359 LGALS3P17931 250 aaKnown RBP7.53□□□□□ -1.2
TNFRSF1A-215ENST00000543359 LCE2BO14633 110 aa7.52□□□□□ -1.21
TNFRSF1A-215ENST00000543359 ERC2-IT1O76042 136 aa7.52□□□□□ -1.21
TNFRSF1A-215ENST00000543359 NDUFC2O95298 119 aa7.52□□□□□ -1.21
TNFRSF1A-215ENST00000543359 IGLV6-57P01721 117 aa7.52□□□□□ -1.21
TNFRSF1A-215ENST00000543359 DDTP30046 118 aa7.52□□□□□ -1.21
TNFRSF1A-215ENST00000543359 LINC00483Q53H64 154 aa7.52□□□□□ -1.21
TNFRSF1A-215ENST00000543359 ETDCA0A1B0GVM5 59 aa7.51□□□□□ -1.21
TNFRSF1A-215ENST00000543359 LINC01545Q5VT33 79 aa7.51□□□□□ -1.21
TNFRSF1A-215ENST00000543359 Q9BRP9 147 aa7.51□□□□□ -1.21
TNFRSF1A-215ENST00000543359 SPANXB1Q9NS25 103 aaPredicted RBP7.51□□□□□ -1.21
TNFRSF1A-215ENST00000543359 ZNF706Q9Y5V0 76 aaPredicted RBP7.51□□□□□ -1.21
TNFRSF1A-215ENST00000543359 LITAFQ99732 161 aa7.5□□□□□ -1.21
TNFRSF1A-215ENST00000543359 SPAG11AQ6PDA7 123 aa7.49□□□□□ -1.21
TNFRSF1A-215ENST00000543359 PPDPFQ9H3Y8 114 aa7.49□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 162.3 ms