RNA–Protein interactions for RNA: ENST00000543004.5

OTUB1-211, Transcript of OTU deubiquitinase, ubiquitin aldehyde binding 1, humanhuman

TSL 5 BASIC

Gene OTUB1, Length 1,647 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
OTUB1-211ENST00000543004 SMR3BP02814 79 aaPredicted RBP13.1□□□□□ -0.31
OTUB1-211ENST00000543004 SCGB1D4Q6XE38 83 aa13.1□□□□□ -0.31
OTUB1-211ENST00000543004 Q8NDZ9 215 aa13.1□□□□□ -0.31
OTUB1-211ENST00000543004 NPC2P61916 151 aa13.09□□□□□ -0.31
OTUB1-211ENST00000543004 EIF4EBP3O60516 100 aaPredicted RBP13.08□□□□□ -0.32
OTUB1-211ENST00000543004 COX8AP10176 69 aa13.08□□□□□ -0.32
OTUB1-211ENST00000543004 KRTAP17-1Q9BYP8 105 aa13.08□□□□□ -0.32
OTUB1-211ENST00000543004 FAT1Q14517 4588 aa13.07□□□□□ -0.32
OTUB1-211ENST00000543004 BOD1L2Q8IYS8 172 aa13.07□□□□□ -0.32
OTUB1-211ENST00000543004 EPM2AB3EWF7 344 aa13.06□□□□□ -0.32
OTUB1-211ENST00000543004 TIMM17BO60830 172 aa13.05□□□□□ -0.32
OTUB1-211ENST00000543004 SOSTDC1Q6X4U4 206 aa13.05□□□□□ -0.32
OTUB1-211ENST00000543004 PHF5AQ7RTV0 110 aaKnown RBP13.05□□□□□ -0.32
OTUB1-211ENST00000543004 M0QXV9 152 aa13.02□□□□□ -0.33
OTUB1-211ENST00000543004 PRR3P79522 188 aaKnown RBP13.02□□□□□ -0.33
OTUB1-211ENST00000543004 PLA2G2DQ9UNK4 145 aa13.02□□□□□ -0.33
OTUB1-211ENST00000543004 C22orf24Q9Y442 160 aa13.02□□□□□ -0.33
OTUB1-211ENST00000543004 VPREB1P12018 145 aa13.01□□□□□ -0.33
OTUB1-211ENST00000543004 TMEM238C9JI98 176 aa13□□□□□ -0.33
OTUB1-211ENST00000543004 SMIM6P0DI80 62 aa13□□□□□ -0.33
OTUB1-211ENST00000543004 LINC00308Q8TCZ7 52 aa13□□□□□ -0.33
OTUB1-211ENST00000543004 DLEU1O43261 78 aa12.99□□□□□ -0.33
OTUB1-211ENST00000543004 S100A12P80511 92 aa12.99□□□□□ -0.33
OTUB1-211ENST00000543004 KRTAP11-1Q8IUC1 163 aa12.99□□□□□ -0.33
OTUB1-211ENST00000543004 LOC107984156A0A0G2JMH3 177 aa12.99□□□□□ -0.33
OTUB1-211ENST00000543004 SLC25A34Q6PIV7 304 aa12.99□□□□□ -0.33
OTUB1-211ENST00000543004 ARL17AQ8IVW1 177 aa12.99□□□□□ -0.33
OTUB1-211ENST00000543004 SPANXDQ9BXN6 97 aa12.99□□□□□ -0.33
OTUB1-211ENST00000543004 SPANXCQ9NY87 97 aa12.99□□□□□ -0.33
OTUB1-211ENST00000543004 HERC2O95714 4834 aa12.98□□□□□ -0.33
OTUB1-211ENST00000543004 VPS13BQ7Z7G8 4022 aa12.98□□□□□ -0.33
OTUB1-211ENST00000543004 LINC00528Q8N1L1 170 aa12.98□□□□□ -0.33
OTUB1-211ENST00000543004 MIEN1Q9BRT3 115 aa12.98□□□□□ -0.33
OTUB1-211ENST00000543004 GAGE10A6NGK3 116 aa12.97□□□□□ -0.33
OTUB1-211ENST00000543004 IGLV5-37A0A075B6J1 123 aa12.96□□□□□ -0.33
OTUB1-211ENST00000543004 C2orf91Q6ZV80 131 aa12.96□□□□□ -0.33
OTUB1-211ENST00000543004 NKAPP1Q8N9T2 125 aa12.96□□□□□ -0.33
OTUB1-211ENST00000543004 NCR3O14931 201 aa12.95□□□□□ -0.34
OTUB1-211ENST00000543004 RPL24P83731 157 aaKnown RBP12.95□□□□□ -0.34
OTUB1-211ENST00000543004 MRPL55Q7Z7F7 128 aaKnown RBP12.95□□□□□ -0.34
OTUB1-211ENST00000543004 MUSTN1Q8IVN3 82 aa12.95□□□□□ -0.34
OTUB1-211ENST00000543004 C7orf33Q8WU49 177 aa12.95□□□□□ -0.34
OTUB1-211ENST00000543004 LINC00167Q96N53 147 aa12.95□□□□□ -0.34
OTUB1-211ENST00000543004 RPL37AP8A6NKH3 93 aa12.93□□□□□ -0.34
OTUB1-211ENST00000543004 SRSF9Q13242 221 aaKnown RBP eCLIP12.93□□□□□ -0.34
OTUB1-211ENST00000543004 PRO1933Q9H354 126 aa12.93□□□□□ -0.34
OTUB1-211ENST00000543004 SPANXB1Q9NS25 103 aaPredicted RBP12.93□□□□□ -0.34
OTUB1-211ENST00000543004 UBE2BP63146 152 aa12.91□□□□□ -0.34
OTUB1-211ENST00000543004 C12orf57Q99622 126 aa12.91□□□□□ -0.34
OTUB1-211ENST00000543004 SRRM2Q9UQ35 2752 aaKnown RBP12.91□□□□□ -0.34
OTUB1-211ENST00000543004 Q6ZVH6 145 aa12.91□□□□□ -0.34
OTUB1-211ENST00000543004 Q8N1X5 172 aa12.91□□□□□ -0.34
OTUB1-211ENST00000543004 IGKV2-28A0A075B6P5 120 aa12.89□□□□□ -0.35
OTUB1-211ENST00000543004 IGKV2D-28P01615 120 aa12.89□□□□□ -0.35
OTUB1-211ENST00000543004 IFITM1P13164 125 aa12.89□□□□□ -0.35
OTUB1-211ENST00000543004 LBHQ53QV2 105 aaPredicted RBP12.89□□□□□ -0.35
OTUB1-211ENST00000543004 Q5VSD8 79 aa12.89□□□□□ -0.35
OTUB1-211ENST00000543004 HIGD1BQ9P298 99 aa12.89□□□□□ -0.35
OTUB1-211ENST00000543004 NDUFC2O95298 119 aa12.88□□□□□ -0.35
OTUB1-211ENST00000543004 HIST1H4GQ99525 98 aa12.88□□□□□ -0.35
OTUB1-211ENST00000543004 PSORS1C2Q9UIG4 136 aa12.88□□□□□ -0.35
OTUB1-211ENST00000543004 M0R378 163 aa12.88□□□□□ -0.35
OTUB1-211ENST00000543004 UQCR10Q9UDW1 63 aa12.88□□□□□ -0.35
OTUB1-211ENST00000543004 FAM229AH3BQW9 127 aa12.87□□□□□ -0.35
OTUB1-211ENST00000543004 RPL37AP61513 92 aaKnown RBP12.87□□□□□ -0.35
OTUB1-211ENST00000543004 KRTAP4-5Q9BYR2 181 aa12.87□□□□□ -0.35
OTUB1-211ENST00000543004 KRTAP10-4P60372 401 aaPredicted RBP12.86□□□□□ -0.35
OTUB1-211ENST00000543004 IGLV1-50A0A075B6I6 118 aa12.85□□□□□ -0.35
OTUB1-211ENST00000543004 LINC00518Q8N0U6 118 aa12.84□□□□□ -0.35
OTUB1-211ENST00000543004 TRBV10-3A0A0K0K1G6 114 aa12.84□□□□□ -0.35
OTUB1-211ENST00000543004 TRBV10-2A0A0K0K1G8 114 aa12.83□□□□□ -0.36
OTUB1-211ENST00000543004 COPS9Q8WXC6 57 aa12.83□□□□□ -0.36
OTUB1-211ENST00000543004 PPDPFQ9H3Y8 114 aa12.83□□□□□ -0.36
OTUB1-211ENST00000543004 A4D1N5 150 aa12.82□□□□□ -0.36
OTUB1-211ENST00000543004 C1orf137Q5JT78 98 aa12.82□□□□□ -0.36
OTUB1-211ENST00000543004 LINC00337Q8N6G1 96 aa12.82□□□□□ -0.36
OTUB1-211ENST00000543004 DDTP30046 118 aa12.8□□□□□ -0.36
OTUB1-211ENST00000543004 IGLV6-57P01721 117 aa12.79□□□□□ -0.36
OTUB1-211ENST00000543004 PLA2G1BP04054 148 aaKnown RBP12.79□□□□□ -0.36
OTUB1-211ENST00000543004 S100A7L2Q5SY68 101 aa12.79□□□□□ -0.36
OTUB1-211ENST00000543004 HNRNPA3P51991 378 aaKnown RBP12.78□□□□□ -0.36
OTUB1-211ENST00000543004 OR13C6PQ8NH95 151 aa12.78□□□□□ -0.36
OTUB1-211ENST00000543004 ABCA13Q86UQ4 5058 aa12.77□□□□□ -0.36
OTUB1-211ENST00000543004 TAL2Q16559 108 aa12.77□□□□□ -0.37
OTUB1-211ENST00000543004 CEND1Q8N111 149 aa12.77□□□□□ -0.37
OTUB1-211ENST00000543004 TMEM126AQ9H061 195 aa12.77□□□□□ -0.37
OTUB1-211ENST00000543004 REG3GQ6UW15 175 aa12.76□□□□□ -0.37
OTUB1-211ENST00000543004 KCNQ1DNQ9H478 68 aa12.75□□□□□ -0.37
OTUB1-211ENST00000543004 FXYD2P54710 66 aa12.74□□□□□ -0.37
OTUB1-211ENST00000543004 HSD52Q0P140 79 aa12.74□□□□□ -0.37
OTUB1-211ENST00000543004 A6NDN8 102 aa12.73□□□□□ -0.37
OTUB1-211ENST00000543004 TSTD3H0UI37 97 aa12.73□□□□□ -0.37
OTUB1-211ENST00000543004 IGLV7-43P04211 117 aa12.73□□□□□ -0.37
OTUB1-211ENST00000543004 PKHD1L1Q86WI1 4243 aa12.72□□□□□ -0.37
OTUB1-211ENST00000543004 PRYO14603 147 aa12.72□□□□□ -0.37
OTUB1-211ENST00000543004 BCE1O60756 84 aa12.72□□□□□ -0.37
OTUB1-211ENST00000543004 TRAV23DV6A0A075B6W5 121 aa12.71□□□□□ -0.37
OTUB1-211ENST00000543004 CFC1BP0CG36 223 aa12.7□□□□□ -0.38
OTUB1-211ENST00000543004 CFC1P0CG37 223 aa12.7□□□□□ -0.38
OTUB1-211ENST00000543004 SPRR1AP35321 89 aa12.7□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 16.7 ms