RNA–Protein interactions for RNA: ENST00000542001.5

VARS2-212, Transcript of valyl-tRNA synthetase 2, mitochondrial, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VARS2, Length 4,064 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS2-212ENST00000542001 HIGD2AQ9BW72 106 aa11.24□□□□□ -0.61
VARS2-212ENST00000542001 LITAFQ99732 161 aa11.24□□□□□ -0.61
VARS2-212ENST00000542001 FAM19A5Q7Z5A7 132 aaPredicted RBP11.23□□□□□ -0.61
VARS2-212ENST00000542001 LELP1Q5T871 98 aa11.23□□□□□ -0.61
VARS2-212ENST00000542001 PPDPFQ9H3Y8 114 aa11.23□□□□□ -0.61
VARS2-212ENST00000542001 UPK3BQ9BT76 320 aa11.23□□□□□ -0.61
VARS2-212ENST00000542001 KIR2DL5BQ8NHK3 375 aa11.22□□□□□ -0.61
VARS2-212ENST00000542001 RPL28P46779 137 aaKnown RBP11.22□□□□□ -0.61
VARS2-212ENST00000542001 TRBV10-3A0A0K0K1G6 114 aa11.21□□□□□ -0.61
VARS2-212ENST00000542001 UQCRQO14949 82 aa11.21□□□□□ -0.61
VARS2-212ENST00000542001 C3orf22Q8N5N4 141 aa11.21□□□□□ -0.62
VARS2-212ENST00000542001 SYCNQ0VAF6 134 aa11.2□□□□□ -0.62
VARS2-212ENST00000542001 C10orf25Q5T742 122 aa11.2□□□□□ -0.62
VARS2-212ENST00000542001 NIPBLQ6KC79 2804 aaeCLIP11.19□□□□□ -0.62
VARS2-212ENST00000542001 SPENQ96T58 3664 aaKnown RBP11.18□□□□□ -0.62
VARS2-212ENST00000542001 USP17L23D6RBM5 183 aa11.17□□□□□ -0.62
VARS2-212ENST00000542001 C16orf95Q9H693 158 aa11.17□□□□□ -0.62
VARS2-212ENST00000542001 LINC00846Q9NV44 126 aa11.17□□□□□ -0.62
VARS2-212ENST00000542001 CCKP06307 115 aa11.17□□□□□ -0.62
VARS2-212ENST00000542001 FUSP35637 526 aaKnown RBP eCLIP11.17□□□□□ -0.62
VARS2-212ENST00000542001 RMI2Q96E14 147 aa11.17□□□□□ -0.62
VARS2-212ENST00000542001 X6R8D5 127 aa11.16□□□□□ -0.62
VARS2-212ENST00000542001 BAHCC1Q9P281 2608 aa11.16□□□□□ -0.62
VARS2-212ENST00000542001 GIG44P09565 113 aaPredicted RBP11.16□□□□□ -0.62
VARS2-212ENST00000542001 Q8N814 137 aa11.15□□□□□ -0.62
VARS2-212ENST00000542001 IGLV5-45A0A087WSX0 123 aa11.14□□□□□ -0.63
VARS2-212ENST00000542001 ZNF73O43830 326 aaPredicted RBP11.14□□□□□ -0.63
VARS2-212ENST00000542001 SNURFQ9Y675 71 aa11.14□□□□□ -0.63
VARS2-212ENST00000542001 FAM19A1Q7Z5A9 133 aa11.13□□□□□ -0.63
VARS2-212ENST00000542001 SPATA3Q8NHX4 192 aa11.13□□□□□ -0.63
VARS2-212ENST00000542001 M0R2N4 97 aa11.11□□□□□ -0.63
VARS2-212ENST00000542001 LYPD5Q6UWN5 251 aa11.11□□□□□ -0.63
VARS2-212ENST00000542001 A0A1B0GUV1 79 aa11.11□□□□□ -0.63
VARS2-212ENST00000542001 HRCT1Q6UXD1 115 aa11.11□□□□□ -0.63
VARS2-212ENST00000542001 C5orf47Q569G3 176 aa11.1□□□□□ -0.63
VARS2-212ENST00000542001 PKIGQ9Y2B9 76 aa11.1□□□□□ -0.63
VARS2-212ENST00000542001 BPY2O14599 106 aa11.09□□□□□ -0.63
VARS2-212ENST00000542001 Q6Q795 121 aa11.09□□□□□ -0.63
VARS2-212ENST00000542001 Q6ZRU5 148 aa11.09□□□□□ -0.63
VARS2-212ENST00000542001 COX7CP15954 63 aa11.08□□□□□ -0.64
VARS2-212ENST00000542001 CR1P17927 2039 aa11.08□□□□□ -0.64
VARS2-212ENST00000542001 FAM240AA0A1B0GVK7 77 aa11.07□□□□□ -0.64
VARS2-212ENST00000542001 KRTAP1-3Q8IUG1 177 aa11.07□□□□□ -0.64
VARS2-212ENST00000542001 SBSPONQ8IVN8 264 aa11.07□□□□□ -0.64
VARS2-212ENST00000542001 KRTAP10-3P60369 221 aa11.06□□□□□ -0.64
VARS2-212ENST00000542001 PLAC8L1A1L4L8 177 aa11.06□□□□□ -0.64
VARS2-212ENST00000542001 A0A0U1RQV1 116 aa11.06□□□□□ -0.64
VARS2-212ENST00000542001 CSNK1G2-AS1Q8NCQ2 148 aa11.06□□□□□ -0.64
VARS2-212ENST00000542001 NHLRC4P0CG21 123 aaPredicted RBP11.05□□□□□ -0.64
VARS2-212ENST00000542001 UBE2AP49459 152 aa11.05□□□□□ -0.64
VARS2-212ENST00000542001 C19orf73Q9NVV2 129 aa11.05□□□□□ -0.64
VARS2-212ENST00000542001 COX17Q14061 63 aa11.04□□□□□ -0.64
VARS2-212ENST00000542001 Q8N9L7 120 aa11.04□□□□□ -0.64
VARS2-212ENST00000542001 M0R378 163 aa11.04□□□□□ -0.64
VARS2-212ENST00000542001 PRR4Q16378 134 aa11.03□□□□□ -0.64
VARS2-212ENST00000542001 BRK1Q8WUW1 75 aa11.03□□□□□ -0.64
VARS2-212ENST00000542001 FAM104AQ969W3 186 aa11.03□□□□□ -0.64
VARS2-212ENST00000542001 ESRGQ1W209 222 aa11.02□□□□□ -0.64
VARS2-212ENST00000542001 CDK2AP2O75956 126 aa11.02□□□□□ -0.65
VARS2-212ENST00000542001 NDUFS5O43920 106 aa11.02□□□□□ -0.65
VARS2-212ENST00000542001 SERP2Q8N6R1 65 aa11.01□□□□□ -0.65
VARS2-212ENST00000542001 IMUPQ9GZP8 106 aa11.01□□□□□ -0.65
VARS2-212ENST00000542001 C9orf129Q5T035 196 aaKnown RBP11□□□□□ -0.65
VARS2-212ENST00000542001 MPLKIPQ8TAP9 179 aa11□□□□□ -0.65
VARS2-212ENST00000542001 C6orf48Q9UBA6 75 aa11□□□□□ -0.65
VARS2-212ENST00000542001 TRAV10A0A0B4J240 114 aa11□□□□□ -0.65
VARS2-212ENST00000542001 DEFB116Q30KQ4 102 aa10.99□□□□□ -0.65
VARS2-212ENST00000542001 LINC00575Q6W349 94 aa10.99□□□□□ -0.65
VARS2-212ENST00000542001 SMCR5Q8TEV8 140 aa10.99□□□□□ -0.65
VARS2-212ENST00000542001 EGFEM1PQ0D2K5 195 aa10.98□□□□□ -0.65
VARS2-212ENST00000542001 PDE6GP18545 87 aa10.97□□□□□ -0.65
VARS2-212ENST00000542001 Q6JHZ5 121 aa10.97□□□□□ -0.65
VARS2-212ENST00000542001 Q8NAQ8 132 aa10.97□□□□□ -0.65
VARS2-212ENST00000542001 FAM236DA0A1B0GTK5 79 aa10.96□□□□□ -0.65
VARS2-212ENST00000542001 FAM236CP0DP71 79 aa10.96□□□□□ -0.65
VARS2-212ENST00000542001 WFDC13Q8IUB5 93 aa10.96□□□□□ -0.65
VARS2-212ENST00000542001 H0Y9J4 135 aa10.96□□□□□ -0.66
VARS2-212ENST00000542001 NDUFC2-KCTD14E9PQ53 114 aa10.95□□□□□ -0.66
VARS2-212ENST00000542001 KRTAP1-1Q07627 177 aa10.95□□□□□ -0.66
VARS2-212ENST00000542001 TMEM258P61165 79 aa10.94□□□□□ -0.66
VARS2-212ENST00000542001 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP10.94□□□□□ -0.66
VARS2-212ENST00000542001 NDUFC2O95298 119 aa10.93□□□□□ -0.66
VARS2-212ENST00000542001 Q6ZVQ6 151 aa10.92□□□□□ -0.66
VARS2-212ENST00000542001 KRTAP24-1Q3LI83 254 aa10.92□□□□□ -0.66
VARS2-212ENST00000542001 IL17DQ8TAD2 202 aa10.91□□□□□ -0.66
VARS2-212ENST00000542001 LRCOL1A6NCL2 159 aa10.9□□□□□ -0.66
VARS2-212ENST00000542001 KMT2BQ9UMN6 2715 aaPredicted RBP10.9□□□□□ -0.66
VARS2-212ENST00000542001 TRBV7-7A0A0K0K1E9 115 aa10.9□□□□□ -0.66
VARS2-212ENST00000542001 MUC7Q8TAX7 377 aa10.9□□□□□ -0.66
VARS2-212ENST00000542001 FAM30AQ9NZY2 134 aa10.9□□□□□ -0.66
VARS2-212ENST00000542001 PRLHP81277 87 aa10.89□□□□□ -0.67
VARS2-212ENST00000542001 ATP5EP2Q5VTU8 51 aa10.89□□□□□ -0.67
VARS2-212ENST00000542001 STAB2Q8WWQ8 2551 aa10.88□□□□□ -0.67
VARS2-212ENST00000542001 C4orf26Q17RF5 130 aa10.87□□□□□ -0.67
VARS2-212ENST00000542001 LINC01547P58512 204 aaPredicted RBP10.87□□□□□ -0.67
VARS2-212ENST00000542001 C1orf137Q5JT78 98 aa10.87□□□□□ -0.67
VARS2-212ENST00000542001 KIAA0087Q14695 138 aa10.86□□□□□ -0.67
VARS2-212ENST00000542001 CSMD2Q7Z408 3487 aa10.86□□□□□ -0.67
VARS2-212ENST00000542001 C7orf33Q8WU49 177 aa10.85□□□□□ -0.67
VARS2-212ENST00000542001 H3BQ85 93 aa10.85□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 69.4 ms