RNA–Protein interactions for RNA: ENST00000541578.5

SNHG1-217, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 3 BASIC

Gene SNHG1, Length 588 nt, Biotype lincRNA, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-217ENST00000541578 CEBPZOSA8MTT3 80 aa2.24□□□□□ -2.05
SNHG1-217ENST00000541578 J3QRE1 110 aa2.24□□□□□ -2.05
SNHG1-217ENST00000541578 LEPROTL1O95214 131 aa2.24□□□□□ -2.05
SNHG1-217ENST00000541578 CD24P25063 80 aa2.24□□□□□ -2.05
SNHG1-217ENST00000541578 GCHFRP30047 84 aa2.24□□□□□ -2.05
SNHG1-217ENST00000541578 UBE2D3P61077 147 aa2.24□□□□□ -2.05
SNHG1-217ENST00000541578 SNRPD3P62318 126 aaKnown RBP2.24□□□□□ -2.05
SNHG1-217ENST00000541578 UBE2D2P62837 147 aa2.24□□□□□ -2.05
SNHG1-217ENST00000541578 SERF2P84101 59 aa2.24□□□□□ -2.05
SNHG1-217ENST00000541578 MIAQ16674 131 aa2.24□□□□□ -2.05
SNHG1-217ENST00000541578 FP248Q71RG6 208 aaPredicted RBP2.24□□□□□ -2.05
SNHG1-217ENST00000541578 C5orf38Q86SI9 138 aa2.24□□□□□ -2.05
SNHG1-217ENST00000541578 SMCR5Q8TEV8 140 aa2.24□□□□□ -2.05
SNHG1-217ENST00000541578 C11orf68Q9H3H3 251 aaKnown RBP2.24□□□□□ -2.05
SNHG1-217ENST00000541578 EPDR1Q9UM22 224 aa2.24□□□□□ -2.05
SNHG1-217ENST00000541578 EPPK1P58107 5090 aaKnown RBP2.24□□□□□ -2.05
SNHG1-217ENST00000541578 DNAH9Q9NYC9 4486 aa2.23□□□□□ -2.05
SNHG1-217ENST00000541578 TRAV41A0A0B4J266 112 aa2.23□□□□□ -2.05
SNHG1-217ENST00000541578 MYMXA0A1B0GTQ4 84 aa2.23□□□□□ -2.05
SNHG1-217ENST00000541578 A0A1W2PNM2 257 aa2.23□□□□□ -2.05
SNHG1-217ENST00000541578 C11orf86A6NJI1 115 aa2.23□□□□□ -2.05
SNHG1-217ENST00000541578 IQCF6A8MYZ5 107 aa2.23□□□□□ -2.05
SNHG1-217ENST00000541578 GNRH2O43555 120 aa2.23□□□□□ -2.05
SNHG1-217ENST00000541578 LY6G6CO95867 125 aa2.23□□□□□ -2.05
SNHG1-217ENST00000541578 PRM2P04554 102 aa2.23□□□□□ -2.05
SNHG1-217ENST00000541578 DYNLT3P51808 116 aa2.23□□□□□ -2.05
SNHG1-217ENST00000541578 FXYD2P54710 66 aa2.23□□□□□ -2.05
SNHG1-217ENST00000541578 C10orf128Q5T292 105 aa2.23□□□□□ -2.05
SNHG1-217ENST00000541578 LCA10Q71F78 164 aa2.23□□□□□ -2.05
SNHG1-217ENST00000541578 PHF5AQ7RTV0 110 aaKnown RBP2.23□□□□□ -2.05
SNHG1-217ENST00000541578 FAM19A2Q8N3H0 131 aa2.23□□□□□ -2.05
SNHG1-217ENST00000541578 DCANP1Q8TF63 244 aa2.23□□□□□ -2.05
SNHG1-217ENST00000541578 TOMM6Q96B49 74 aa2.23□□□□□ -2.05
SNHG1-217ENST00000541578 NHP2Q9NX24 153 aaKnown RBP2.23□□□□□ -2.05
SNHG1-217ENST00000541578 RYR2Q92736 4967 aa2.23□□□□□ -2.05
SNHG1-217ENST00000541578 TNCP24821 2201 aa2.22□□□□□ -2.05
SNHG1-217ENST00000541578 IGLV10-54A0A075B6I4 117 aa2.22□□□□□ -2.05
SNHG1-217ENST00000541578 PIGBOS1A0A0B4J2F0 54 aa2.22□□□□□ -2.05
SNHG1-217ENST00000541578 A0A1B0GWA3 101 aa2.22□□□□□ -2.05
SNHG1-217ENST00000541578 M0R378 163 aa2.22□□□□□ -2.05
SNHG1-217ENST00000541578 LEPROTO15243 131 aa2.22□□□□□ -2.05
SNHG1-217ENST00000541578 NDUFC1O43677 76 aa2.22□□□□□ -2.05
SNHG1-217ENST00000541578 ZNF73O43830 326 aaPredicted RBP2.22□□□□□ -2.05
SNHG1-217ENST00000541578 BCE1O60756 84 aa2.22□□□□□ -2.05
SNHG1-217ENST00000541578 TIMM17BO60830 172 aa2.22□□□□□ -2.05
SNHG1-217ENST00000541578 HBDP02042 147 aa2.22□□□□□ -2.05
SNHG1-217ENST00000541578 HBBP68871 147 aa2.22□□□□□ -2.05
SNHG1-217ENST00000541578 RPL18Q07020 188 aaKnown RBP2.22□□□□□ -2.05
SNHG1-217ENST00000541578 INSL4Q14641 139 aa2.22□□□□□ -2.05
SNHG1-217ENST00000541578 ZNF56Q15929 161 aa2.22□□□□□ -2.05
SNHG1-217ENST00000541578 KIAA2026Q5HYC2 2103 aa2.22□□□□□ -2.05
SNHG1-217ENST00000541578 MINOS1Q5TGZ0 78 aa2.22□□□□□ -2.05
SNHG1-217ENST00000541578 IFI27L1Q96BM0 104 aa2.22□□□□□ -2.05
SNHG1-217ENST00000541578 HECTD4Q9Y4D8 3996 aa2.21□□□□□ -2.06
SNHG1-217ENST00000541578 RYR1P21817 5038 aa2.21□□□□□ -2.06
SNHG1-217ENST00000541578 DNAH1Q9P2D7 4330 aa2.21□□□□□ -2.06
SNHG1-217ENST00000541578 J3QLW9 94 aa2.21□□□□□ -2.06
SNHG1-217ENST00000541578 TMEM256-PLSCR3K7ERE1 68 aa2.21□□□□□ -2.06
SNHG1-217ENST00000541578 PPYP01298 95 aa2.21□□□□□ -2.06
SNHG1-217ENST00000541578 FXYD6P3P58550 94 aa2.21□□□□□ -2.06
SNHG1-217ENST00000541578 KRTAP10-10P60014 251 aa2.21□□□□□ -2.06
SNHG1-217ENST00000541578 BLCAPP62952 87 aa2.21□□□□□ -2.06
SNHG1-217ENST00000541578 MIC13Q5XKP0 118 aa2.21□□□□□ -2.06
SNHG1-217ENST00000541578 PFN4Q8NHR9 129 aa2.21□□□□□ -2.06
SNHG1-217ENST00000541578 WFDC6Q9BQY6 131 aa2.21□□□□□ -2.06
SNHG1-217ENST00000541578 OSTCQ9NRP0 149 aa2.21□□□□□ -2.06
SNHG1-217ENST00000541578 TP73-AS1Q9UF72 201 aa2.21□□□□□ -2.06
SNHG1-217ENST00000541578 DYNC2H1Q8NCM8 4307 aaKnown RBP2.21□□□□□ -2.06
SNHG1-217ENST00000541578 HERC2O95714 4834 aa2.2□□□□□ -2.06
SNHG1-217ENST00000541578 CTXND1A0A1B0GTU2 59 aa2.2□□□□□ -2.06
SNHG1-217ENST00000541578 NUPR2A6NF83 97 aa2.2□□□□□ -2.06
SNHG1-217ENST00000541578 IBA57-AS1B1ANH7 110 aa2.2□□□□□ -2.06
SNHG1-217ENST00000541578 K7ERJ3 54 aa2.2□□□□□ -2.06
SNHG1-217ENST00000541578 CCKP06307 115 aa2.2□□□□□ -2.06
SNHG1-217ENST00000541578 S100A4P26447 101 aaKnown RBP2.2□□□□□ -2.06
SNHG1-217ENST00000541578 CKS2P33552 79 aa2.2□□□□□ -2.06
SNHG1-217ENST00000541578 UBE2BP63146 152 aa2.2□□□□□ -2.06
SNHG1-217ENST00000541578 ERHP84090 104 aaKnown RBP2.2□□□□□ -2.06
SNHG1-217ENST00000541578 Q8N8P6 123 aa2.2□□□□□ -2.06
SNHG1-217ENST00000541578 SPTSSAQ969W0 71 aa2.2□□□□□ -2.06
SNHG1-217ENST00000541578 PSORS1C2Q9UIG4 136 aa2.2□□□□□ -2.06
SNHG1-217ENST00000541578 IGKV1D-42A0A075B6H8 117 aa2.19□□□□□ -2.06
SNHG1-217ENST00000541578 TRAV16A0A0A6YYK6 109 aaPredicted RBP2.19□□□□□ -2.06
SNHG1-217ENST00000541578 TRBV10-2A0A0K0K1G8 114 aa2.19□□□□□ -2.06
SNHG1-217ENST00000541578 SMIM27A0A1W2PRY6 76 aa2.19□□□□□ -2.06
SNHG1-217ENST00000541578 ZNF80P51504 273 aaPredicted RBP2.19□□□□□ -2.06
SNHG1-217ENST00000541578 SUPT4H1P63272 117 aaKnown RBP2.19□□□□□ -2.06
SNHG1-217ENST00000541578 LINC01590Q5TEZ4 76 aa2.19□□□□□ -2.06
SNHG1-217ENST00000541578 LYZL1Q6UWQ5 148 aa2.19□□□□□ -2.06
SNHG1-217ENST00000541578 C7orf65Q6ZTY9 151 aa2.19□□□□□ -2.06
SNHG1-217ENST00000541578 R4GMQ9 66 aa2.19□□□□□ -2.06
SNHG1-217ENST00000541578 TRBV7-3A0A075B6L6 115 aa2.18□□□□□ -2.06
SNHG1-217ENST00000541578 TRBV25-1A0A075B6N4 114 aa2.18□□□□□ -2.06
SNHG1-217ENST00000541578 TRAV3A0A0B4J244 114 aa2.18□□□□□ -2.06
SNHG1-217ENST00000541578 LOC107984156A0A0G2JMH3 177 aa2.18□□□□□ -2.06
SNHG1-217ENST00000541578 SPRR5A0A1B0GTR4 108 aa2.18□□□□□ -2.06
SNHG1-217ENST00000541578 SDHAF1A6NFY7 115 aa2.18□□□□□ -2.06
SNHG1-217ENST00000541578 CRYM-AS1A6NIL9 109 aa2.18□□□□□ -2.06
SNHG1-217ENST00000541578 H3BVH4 76 aa2.18□□□□□ -2.06
SNHG1-217ENST00000541578 P0C880 135 aa2.18□□□□□ -2.06
Retrieved 100 of 20,778 RNA–protein pairs in 114.4 ms