RNA–Protein interactions for RNA: ENST00000541102.1

LTBR-209, Transcript of lymphotoxin beta receptor, humanhuman

TSL 5 BASIC

Gene LTBR, Length 1,084 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTBR-209ENST00000541102 SERTAD4-AS1Q5TG53 156 aa8.81□□□□□ -1
LTBR-209ENST00000541102 PHF5AQ7RTV0 110 aaKnown RBP8.81□□□□□ -1
LTBR-209ENST00000541102 FAM19A5Q7Z5A7 132 aaPredicted RBP8.81□□□□□ -1
LTBR-209ENST00000541102 SMIM13P0DJ93 91 aa8.8□□□□□ -1
LTBR-209ENST00000541102 MT1HL1P0DM35 61 aa8.79□□□□□ -1
LTBR-209ENST00000541102 LGALS3P17931 250 aaKnown RBP8.79□□□□□ -1
LTBR-209ENST00000541102 KRTAP11-1Q8IUC1 163 aa8.79□□□□□ -1
LTBR-209ENST00000541102 Q8NDZ9 215 aa8.79□□□□□ -1
LTBR-209ENST00000541102 SND1-IT1Q9HBX3 110 aa8.79□□□□□ -1
LTBR-209ENST00000541102 MYMXA0A1B0GTQ4 84 aa8.78□□□□□ -1
LTBR-209ENST00000541102 LINC00158P58513 81 aa8.77□□□□□ -1.01
LTBR-209ENST00000541102 HERV-K104P63124 156 aa8.77□□□□□ -1.01
LTBR-209ENST00000541102 SFTA2Q6UW10 78 aa8.77□□□□□ -1.01
LTBR-209ENST00000541102 SPINK6Q6UWN8 80 aa8.77□□□□□ -1.01
LTBR-209ENST00000541102 PSORS1C2Q9UIG4 136 aa8.77□□□□□ -1.01
LTBR-209ENST00000541102 SCGB1D1O95968 90 aa8.76□□□□□ -1.01
LTBR-209ENST00000541102 SRSF9Q13242 221 aaKnown RBP eCLIP8.76□□□□□ -1.01
LTBR-209ENST00000541102 COX17Q14061 63 aa8.76□□□□□ -1.01
LTBR-209ENST00000541102 MEIG1Q5JSS6 88 aa8.76□□□□□ -1.01
LTBR-209ENST00000541102 DAND5Q8N907 189 aa8.76□□□□□ -1.01
LTBR-209ENST00000541102 A0A0J9YXY3 114 aa8.75□□□□□ -1.01
LTBR-209ENST00000541102 NMUP48645 174 aa8.75□□□□□ -1.01
LTBR-209ENST00000541102 C1orf137Q5JT78 98 aa8.75□□□□□ -1.01
LTBR-209ENST00000541102 M0QXV9 152 aa8.74□□□□□ -1.01
LTBR-209ENST00000541102 EIF4EBP3O60516 100 aaPredicted RBP8.74□□□□□ -1.01
LTBR-209ENST00000541102 ADAMTSL4-AS1Q5T5F5 129 aa8.74□□□□□ -1.01
LTBR-209ENST00000541102 REG3GQ6UW15 175 aa8.74□□□□□ -1.01
LTBR-209ENST00000541102 PCP2Q8IVA1 136 aa8.74□□□□□ -1.01
LTBR-209ENST00000541102 MIR7-3HGQ8N6C7 128 aa8.74□□□□□ -1.01
LTBR-209ENST00000541102 LINC01600Q96MT4 127 aa8.74□□□□□ -1.01
LTBR-209ENST00000541102 ZNF815PA8K554 130 aa8.73□□□□□ -1.01
LTBR-209ENST00000541102 LITAFQ99732 161 aa8.73□□□□□ -1.01
LTBR-209ENST00000541102 PLA2G2DQ9UNK4 145 aa8.73□□□□□ -1.01
LTBR-209ENST00000541102 C22orf24Q9Y442 160 aa8.73□□□□□ -1.01
LTBR-209ENST00000541102 TP73-AS1Q9UF72 201 aa8.72□□□□□ -1.01
LTBR-209ENST00000541102 VPREB1P12018 145 aa8.71□□□□□ -1.02
LTBR-209ENST00000541102 UBE2BP63146 152 aa8.71□□□□□ -1.02
LTBR-209ENST00000541102 IGLV5-37A0A075B6J1 123 aa8.7□□□□□ -1.02
LTBR-209ENST00000541102 GAGE10A6NGK3 116 aa8.7□□□□□ -1.02
LTBR-209ENST00000541102 JOSD1Q15040 202 aaPredicted RBP8.7□□□□□ -1.02
LTBR-209ENST00000541102 SOSTDC1Q6X4U4 206 aa8.7□□□□□ -1.02
LTBR-209ENST00000541102 IGLV7-43P04211 117 aa8.69□□□□□ -1.02
LTBR-209ENST00000541102 AKR1D1P51857 326 aa8.69□□□□□ -1.02
LTBR-209ENST00000541102 NPC2P61916 151 aa8.69□□□□□ -1.02
LTBR-209ENST00000541102 RPL37AP8A6NKH3 93 aa8.68□□□□□ -1.02
LTBR-209ENST00000541102 PYY3Q5JQD4 70 aa8.68□□□□□ -1.02
LTBR-209ENST00000541102 MRPL55Q7Z7F7 128 aaKnown RBP8.68□□□□□ -1.02
LTBR-209ENST00000541102 BOD1L2Q8IYS8 172 aa8.68□□□□□ -1.02
LTBR-209ENST00000541102 LINC00167Q96N53 147 aa8.68□□□□□ -1.02
LTBR-209ENST00000541102 LINC00587B1AMM8 73 aa8.67□□□□□ -1.02
LTBR-209ENST00000541102 LOC107984156A0A0G2JMH3 177 aa8.66□□□□□ -1.02
LTBR-209ENST00000541102 HSBP1L1C9JCN9 74 aa8.66□□□□□ -1.02
LTBR-209ENST00000541102 KRTAP10-8P60410 259 aa8.66□□□□□ -1.02
LTBR-209ENST00000541102 ARL17AQ8IVW1 177 aa8.66□□□□□ -1.02
LTBR-209ENST00000541102 HMCN2Q8NDA2 5059 aa8.66□□□□□ -1.02
LTBR-209ENST00000541102 TNXBP22105 4242 aa8.65□□□□□ -1.02
LTBR-209ENST00000541102 TIMM17BO60830 172 aa8.65□□□□□ -1.02
LTBR-209ENST00000541102 NKAPP1Q8N9T2 125 aa8.65□□□□□ -1.02
LTBR-209ENST00000541102 DIRC1Q969H9 104 aa8.65□□□□□ -1.02
LTBR-209ENST00000541102 NCR3O14931 201 aa8.64□□□□□ -1.03
LTBR-209ENST00000541102 LBHQ53QV2 105 aaPredicted RBP8.64□□□□□ -1.03
LTBR-209ENST00000541102 PAM16Q9Y3D7 125 aa8.64□□□□□ -1.03
LTBR-209ENST00000541102 IGKV2-28A0A075B6P5 120 aa8.63□□□□□ -1.03
LTBR-209ENST00000541102 IGKV2D-28P01615 120 aa8.63□□□□□ -1.03
LTBR-209ENST00000541102 RPL24P83731 157 aaKnown RBP8.63□□□□□ -1.03
LTBR-209ENST00000541102 SCGB1D4Q6XE38 83 aa8.63□□□□□ -1.03
LTBR-209ENST00000541102 LINC00308Q8TCZ7 52 aa8.63□□□□□ -1.03
LTBR-209ENST00000541102 SPATA45Q537H7 98 aa8.62□□□□□ -1.03
LTBR-209ENST00000541102 IGLV1-50A0A075B6I6 118 aa8.61□□□□□ -1.03
LTBR-209ENST00000541102 H0Y9J4 135 aa8.61□□□□□ -1.03
LTBR-209ENST00000541102 COX8AP10176 69 aa8.61□□□□□ -1.03
LTBR-209ENST00000541102 C14orf144Q96I85 54 aa8.61□□□□□ -1.03
LTBR-209ENST00000541102 VAMP8Q9BV40 100 aa8.61□□□□□ -1.03
LTBR-209ENST00000541102 TMEM238C9JI98 176 aa8.6□□□□□ -1.03
LTBR-209ENST00000541102 SPANXDQ9BXN6 97 aa8.6□□□□□ -1.03
LTBR-209ENST00000541102 SPANXCQ9NY87 97 aa8.6□□□□□ -1.03
LTBR-209ENST00000541102 M0R378 163 aa8.59□□□□□ -1.03
LTBR-209ENST00000541102 PRR26Q8N8Z3 221 aa8.59□□□□□ -1.03
LTBR-209ENST00000541102 MIEN1Q9BRT3 115 aa8.58□□□□□ -1.04
LTBR-209ENST00000541102 TRBV10-3A0A0K0K1G6 114 aa8.57□□□□□ -1.04
LTBR-209ENST00000541102 MUSTN1Q8IVN3 82 aa8.57□□□□□ -1.04
LTBR-209ENST00000541102 ZNF861PO60384 105 aa8.56□□□□□ -1.04
LTBR-209ENST00000541102 NDUFC2O95298 119 aa8.56□□□□□ -1.04
LTBR-209ENST00000541102 SPANXB1Q9NS25 103 aaPredicted RBP8.56□□□□□ -1.04
LTBR-209ENST00000541102 LOC105371267A0A1B0GV96 52 aa8.55□□□□□ -1.04
LTBR-209ENST00000541102 BCE1O60756 84 aa8.55□□□□□ -1.04
LTBR-209ENST00000541102 TMEM126AQ9H061 195 aa8.55□□□□□ -1.04
LTBR-209ENST00000541102 TRBV10-2A0A0K0K1G8 114 aa8.54□□□□□ -1.04
LTBR-209ENST00000541102 DLEU1O43261 78 aa8.54□□□□□ -1.04
LTBR-209ENST00000541102 C2orf91Q6ZV80 131 aa8.54□□□□□ -1.04
LTBR-209ENST00000541102 IGLV6-57P01721 117 aa8.53□□□□□ -1.04
LTBR-209ENST00000541102 KRTAP1-4P0C5Y4 121 aa8.53□□□□□ -1.04
LTBR-209ENST00000541102 DDTP30046 118 aa8.53□□□□□ -1.04
LTBR-209ENST00000541102 KRTAP13-1Q8IUC0 172 aa8.53□□□□□ -1.04
LTBR-209ENST00000541102 KCNQ1DNQ9H478 68 aa8.53□□□□□ -1.04
LTBR-209ENST00000541102 IFITM1P13164 125 aa8.52□□□□□ -1.05
LTBR-209ENST00000541102 RPL28P46779 137 aaKnown RBP8.52□□□□□ -1.05
LTBR-209ENST00000541102 SLC25A34Q6PIV7 304 aa8.52□□□□□ -1.05
LTBR-209ENST00000541102 Q6ZVH6 145 aa8.52□□□□□ -1.05
LTBR-209ENST00000541102 LINC00337Q8N6G1 96 aa8.52□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 95.3 ms