RNA–Protein interactions for RNA: ENST00000540683.1

CDCA3-208, Transcript of cell division cycle associated 3, humanhuman

TSL 2 BASIC

Gene CDCA3, Length 985 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDCA3-208ENST00000540683 TRIAP1O43715 76 aa6.25□□□□□ -1.41
CDCA3-208ENST00000540683 HERV-K104P63124 156 aa6.25□□□□□ -1.41
CDCA3-208ENST00000540683 KRTAP11-1Q8IUC1 163 aa6.25□□□□□ -1.41
CDCA3-208ENST00000540683 MAP1LC3CQ9BXW4 147 aa6.25□□□□□ -1.41
CDCA3-208ENST00000540683 C11orf86A6NJI1 115 aa6.24□□□□□ -1.41
CDCA3-208ENST00000540683 RPL37AP8A6NKH3 93 aa6.24□□□□□ -1.41
CDCA3-208ENST00000540683 KRTAP1-4P0C5Y4 121 aa6.24□□□□□ -1.41
CDCA3-208ENST00000540683 CTAG1AP78358 180 aa6.24□□□□□ -1.41
CDCA3-208ENST00000540683 PMCHL1Q16048 86 aa6.24□□□□□ -1.41
CDCA3-208ENST00000540683 SND1-IT1Q9HBX3 110 aa6.24□□□□□ -1.41
CDCA3-208ENST00000540683 GAGE10A6NGK3 116 aa6.23□□□□□ -1.41
CDCA3-208ENST00000540683 LINC00158P58513 81 aa6.23□□□□□ -1.41
CDCA3-208ENST00000540683 FAM229BQ4G0N7 80 aa6.23□□□□□ -1.41
CDCA3-208ENST00000540683 URB1-AS1Q96HZ7 61 aa6.23□□□□□ -1.41
CDCA3-208ENST00000540683 HSPB8Q9UJY1 196 aa6.23□□□□□ -1.41
CDCA3-208ENST00000540683 UBR4Q5T4S7 5183 aa6.23□□□□□ -1.41
CDCA3-208ENST00000540683 PLNP26678 52 aa6.22□□□□□ -1.41
CDCA3-208ENST00000540683 PCP4P48539 62 aa6.22□□□□□ -1.41
CDCA3-208ENST00000540683 HERVK_113P61574 105 aa6.22□□□□□ -1.41
CDCA3-208ENST00000540683 TYMSOSQ8TAI1 123 aa6.22□□□□□ -1.41
CDCA3-208ENST00000540683 ZNF625Q96I27 306 aaPredicted RBP6.22□□□□□ -1.41
CDCA3-208ENST00000540683 IGKV2-28A0A075B6P5 120 aa6.21□□□□□ -1.42
CDCA3-208ENST00000540683 MYMXA0A1B0GTQ4 84 aa6.21□□□□□ -1.42
CDCA3-208ENST00000540683 TMEM223A0PJW6 202 aa6.21□□□□□ -1.42
CDCA3-208ENST00000540683 IGKV2D-28P01615 120 aa6.21□□□□□ -1.42
CDCA3-208ENST00000540683 MEIG1Q5JSS6 88 aa6.21□□□□□ -1.42
CDCA3-208ENST00000540683 ZNF706Q9Y5V0 76 aaPredicted RBP6.21□□□□□ -1.42
CDCA3-208ENST00000540683 IGKV2D-26A0A0A0MRZ7 120 aa6.2□□□□□ -1.42
CDCA3-208ENST00000540683 M0R378 163 aa6.2□□□□□ -1.42
CDCA3-208ENST00000540683 LEPROTL1O95214 131 aa6.2□□□□□ -1.42
CDCA3-208ENST00000540683 VPREB1P12018 145 aa6.2□□□□□ -1.42
CDCA3-208ENST00000540683 FAM19A1Q7Z5A9 133 aa6.2□□□□□ -1.42
CDCA3-208ENST00000540683 TMEM126AQ9H061 195 aa6.2□□□□□ -1.42
CDCA3-208ENST00000540683 NMUP48645 174 aa6.19□□□□□ -1.42
CDCA3-208ENST00000540683 PLEKHB2Q96CS7 222 aa6.19□□□□□ -1.42
CDCA3-208ENST00000540683 YPEL4Q96NS1 127 aa6.19□□□□□ -1.42
CDCA3-208ENST00000540683 CBY1Q9Y3M2 126 aa6.19□□□□□ -1.42
CDCA3-208ENST00000540683 PRR4Q16378 134 aa6.18□□□□□ -1.42
CDCA3-208ENST00000540683 NDUFA12Q9UI09 145 aa6.18□□□□□ -1.42
CDCA3-208ENST00000540683 PRYO14603 147 aa6.17□□□□□ -1.42
CDCA3-208ENST00000540683 TRGC2P03986 189 aa6.17□□□□□ -1.42
CDCA3-208ENST00000540683 KRTAP13-1Q8IUC0 172 aa6.17□□□□□ -1.42
CDCA3-208ENST00000540683 CBLN2Q8IUK8 224 aa6.17□□□□□ -1.42
CDCA3-208ENST00000540683 MIEN1Q9BRT3 115 aa6.17□□□□□ -1.42
CDCA3-208ENST00000540683 LRP2P98164 4655 aa6.16□□□□□ -1.42
CDCA3-208ENST00000540683 DPM2O94777 84 aa6.16□□□□□ -1.42
CDCA3-208ENST00000540683 BOD1L2Q8IYS8 172 aa6.16□□□□□ -1.42
CDCA3-208ENST00000540683 H0Y8G0 127 aa6.15□□□□□ -1.42
CDCA3-208ENST00000540683 LEPROTO15243 131 aa6.15□□□□□ -1.42
CDCA3-208ENST00000540683 LGALS3P17931 250 aaKnown RBP6.15□□□□□ -1.42
CDCA3-208ENST00000540683 SPAG11AQ6PDA7 123 aa6.15□□□□□ -1.42
CDCA3-208ENST00000540683 FAM19A2Q8N3H0 131 aa6.15□□□□□ -1.42
CDCA3-208ENST00000540683 ETDCA0A1B0GVM5 59 aa6.14□□□□□ -1.43
CDCA3-208ENST00000540683 SERF1AO75920 110 aa6.14□□□□□ -1.43
CDCA3-208ENST00000540683 SMIM13P0DJ93 91 aa6.14□□□□□ -1.43
CDCA3-208ENST00000540683 PRLHP81277 87 aa6.14□□□□□ -1.43
CDCA3-208ENST00000540683 MIR7-3HGQ8N6C7 128 aa6.14□□□□□ -1.43
CDCA3-208ENST00000540683 LINC00337Q8N6G1 96 aa6.14□□□□□ -1.43
CDCA3-208ENST00000540683 LINC00304Q8N9R0 145 aa6.14□□□□□ -1.43
CDCA3-208ENST00000540683 TRBV10-2A0A0K0K1G8 114 aa6.13□□□□□ -1.43
CDCA3-208ENST00000540683 A0A0U1RRA0 63 aa6.13□□□□□ -1.43
CDCA3-208ENST00000540683 TMEM238C9JI98 176 aa6.13□□□□□ -1.43
CDCA3-208ENST00000540683 J3QQQ9 107 aa6.13□□□□□ -1.43
CDCA3-208ENST00000540683 IGKCP01834 107 aa6.13□□□□□ -1.43
CDCA3-208ENST00000540683 LINC00310P59036 64 aa6.13□□□□□ -1.43
CDCA3-208ENST00000540683 HIGD2AQ9BW72 106 aa6.13□□□□□ -1.43
CDCA3-208ENST00000540683 KCNQ1DNQ9H478 68 aa6.13□□□□□ -1.43
CDCA3-208ENST00000540683 A0A087X002 238 aa6.12□□□□□ -1.43
CDCA3-208ENST00000540683 LOC107984156A0A0G2JMH3 177 aa6.12□□□□□ -1.43
CDCA3-208ENST00000540683 A0A0U1RQV1 116 aa6.12□□□□□ -1.43
CDCA3-208ENST00000540683 TSPAN13O95857 204 aa6.12□□□□□ -1.43
CDCA3-208ENST00000540683 ARL17AQ8IVW1 177 aa6.12□□□□□ -1.43
CDCA3-208ENST00000540683 SCO1O75880 301 aa6.11□□□□□ -1.43
CDCA3-208ENST00000540683 JOSD1Q15040 202 aaPredicted RBP6.11□□□□□ -1.43
CDCA3-208ENST00000540683 SPANXB1Q9NS25 103 aaPredicted RBP6.11□□□□□ -1.43
CDCA3-208ENST00000540683 NDUFC2O95298 119 aa6.1□□□□□ -1.43
CDCA3-208ENST00000540683 FABP4P15090 132 aa6.1□□□□□ -1.43
CDCA3-208ENST00000540683 HINT1P49773 126 aaPredicted RBP6.1□□□□□ -1.43
CDCA3-208ENST00000540683 AKR1D1P51857 326 aa6.1□□□□□ -1.43
CDCA3-208ENST00000540683 S100A7L2Q5SY68 101 aa6.1□□□□□ -1.43
CDCA3-208ENST00000540683 NCR3O14931 201 aa6.09□□□□□ -1.43
CDCA3-208ENST00000540683 DDTP30046 118 aa6.09□□□□□ -1.43
CDCA3-208ENST00000540683 SPRR4Q96PI1 79 aa6.09□□□□□ -1.43
CDCA3-208ENST00000540683 COLCA2A8K830 154 aa6.08□□□□□ -1.44
CDCA3-208ENST00000540683 SPRR1AP35321 89 aa6.08□□□□□ -1.44
CDCA3-208ENST00000540683 COPS9Q8WXC6 57 aa6.08□□□□□ -1.44
CDCA3-208ENST00000540683 RNF213Q63HN8 5207 aa6.08□□□□□ -1.44
CDCA3-208ENST00000540683 E9PLD3 99 aa6.07□□□□□ -1.44
CDCA3-208ENST00000540683 KRTAP13-2Q52LG2 175 aa6.07□□□□□ -1.44
CDCA3-208ENST00000540683 TRBV10-3A0A0K0K1G6 114 aa6.06□□□□□ -1.44
CDCA3-208ENST00000540683 C5orf52A6NGY3 159 aa6.06□□□□□ -1.44
CDCA3-208ENST00000540683 FP248Q71RG6 208 aaPredicted RBP6.06□□□□□ -1.44
CDCA3-208ENST00000540683 SLC7A5P1Q8MH63 180 aa6.06□□□□□ -1.44
CDCA3-208ENST00000540683 Q8NDZ9 215 aa6.06□□□□□ -1.44
CDCA3-208ENST00000540683 ANAPC11Q9NYG5 84 aa6.06□□□□□ -1.44
CDCA3-208ENST00000540683 KRTAP23-1A1A580 65 aa6.05□□□□□ -1.44
CDCA3-208ENST00000540683 C20orf202A1L168 122 aa6.05□□□□□ -1.44
CDCA3-208ENST00000540683 SYS1-DBNDD2H3BUS1 97 aa6.05□□□□□ -1.44
CDCA3-208ENST00000540683 SPINK1P00995 79 aa6.05□□□□□ -1.44
CDCA3-208ENST00000540683 SLC25A34Q6PIV7 304 aa6.05□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 53.1 ms