RNA–Protein interactions for RNA: ENST00000540021.5

MSH6-210, Transcript of mutS homolog 6, humanhuman

TSL 2 BASIC

Gene MSH6, Length 3,930 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH6-210ENST00000540021 C10orf25Q5T742 122 aa8.96□□□□□ -0.98
MSH6-210ENST00000540021 RMI2Q96E14 147 aa8.96□□□□□ -0.98
MSH6-210ENST00000540021 CSMD2Q7Z408 3487 aa8.95□□□□□ -0.98
MSH6-210ENST00000540021 GIG44P09565 113 aaPredicted RBP8.94□□□□□ -0.98
MSH6-210ENST00000540021 LINC00575Q6W349 94 aa8.94□□□□□ -0.98
MSH6-210ENST00000540021 Q6ZVQ6 151 aa8.94□□□□□ -0.98
MSH6-210ENST00000540021 Q8N9L7 120 aa8.94□□□□□ -0.98
MSH6-210ENST00000540021 LINC01547P58512 204 aaPredicted RBP8.94□□□□□ -0.98
MSH6-210ENST00000540021 C2orf48Q96LS8 159 aa8.94□□□□□ -0.98
MSH6-210ENST00000540021 COX17Q14061 63 aa8.93□□□□□ -0.98
MSH6-210ENST00000540021 FAM19A3Q7Z5A8 133 aa8.93□□□□□ -0.98
MSH6-210ENST00000540021 UNC79Q9P2D8 2635 aa8.93□□□□□ -0.98
MSH6-210ENST00000540021 C22orf24Q9Y442 160 aa8.93□□□□□ -0.98
MSH6-210ENST00000540021 ZNF73O43830 326 aaPredicted RBP8.92□□□□□ -0.98
MSH6-210ENST00000540021 SMR3AQ99954 134 aa8.92□□□□□ -0.98
MSH6-210ENST00000540021 A0A1B0GUV1 79 aa8.92□□□□□ -0.98
MSH6-210ENST00000540021 PLAC8L1A1L4L8 177 aa8.92□□□□□ -0.98
MSH6-210ENST00000540021 BRK1Q8WUW1 75 aa8.92□□□□□ -0.98
MSH6-210ENST00000540021 PKIGQ9Y2B9 76 aa8.92□□□□□ -0.98
MSH6-210ENST00000540021 PDE6GP18545 87 aa8.91□□□□□ -0.98
MSH6-210ENST00000540021 TRAV7A0A075B6U4 112 aa8.91□□□□□ -0.98
MSH6-210ENST00000540021 LYRM9A8MSI8 78 aa8.91□□□□□ -0.98
MSH6-210ENST00000540021 IL17DQ8TAD2 202 aa8.91□□□□□ -0.98
MSH6-210ENST00000540021 USP24Q9UPU5 2620 aa8.91□□□□□ -0.98
MSH6-210ENST00000540021 BPY2O14599 106 aa8.9□□□□□ -0.98
MSH6-210ENST00000540021 FSHBP01225 129 aa8.9□□□□□ -0.98
MSH6-210ENST00000540021 SETXQ7Z333 2677 aaKnown RBP8.9□□□□□ -0.98
MSH6-210ENST00000540021 A0A096LNT2 108 aa8.9□□□□□ -0.98
MSH6-210ENST00000540021 TRAV10A0A0B4J240 114 aa8.9□□□□□ -0.98
MSH6-210ENST00000540021 A0A0U1RQV1 116 aa8.9□□□□□ -0.98
MSH6-210ENST00000540021 C9orf66Q5T8R8 295 aa8.89□□□□□ -0.99
MSH6-210ENST00000540021 NIPBLQ6KC79 2804 aaeCLIP8.89□□□□□ -0.992e-6■■□□□ 12.2
MSH6-210ENST00000540021 CELA1Q9UNI1 258 aa8.88□□□□□ -0.99
MSH6-210ENST00000540021 MUC7Q8TAX7 377 aa8.88□□□□□ -0.99
MSH6-210ENST00000540021 FUSP35637 526 aaKnown RBP eCLIP8.87□□□□□ -0.99
MSH6-210ENST00000540021 M0R2N4 97 aa8.87□□□□□ -0.99
MSH6-210ENST00000540021 RPS28P62857 69 aaKnown RBP8.86□□□□□ -0.99
MSH6-210ENST00000540021 UBE2BP63146 152 aa8.86□□□□□ -0.99
MSH6-210ENST00000540021 Q6ZQT0 140 aa8.86□□□□□ -0.99
MSH6-210ENST00000540021 CR1P17927 2039 aa8.86□□□□□ -0.99
MSH6-210ENST00000540021 ETDCA0A1B0GVM5 59 aa8.86□□□□□ -0.99
MSH6-210ENST00000540021 CSNK1G2-AS1Q8NCQ2 148 aa8.86□□□□□ -0.99
MSH6-210ENST00000540021 APCP25054 2843 aa8.85□□□□□ -0.99
MSH6-210ENST00000540021 LRCOL1A6NCL2 159 aa8.85□□□□□ -0.99
MSH6-210ENST00000540021 LY6G6DO95868 133 aa8.85□□□□□ -0.99
MSH6-210ENST00000540021 MIFP14174 115 aa8.85□□□□□ -0.99
MSH6-210ENST00000540021 SPATA3Q8NHX4 192 aa8.85□□□□□ -0.99
MSH6-210ENST00000540021 PRR4Q16378 134 aa8.85□□□□□ -0.99
MSH6-210ENST00000540021 LELP1Q5T871 98 aa8.85□□□□□ -0.99
MSH6-210ENST00000540021 UBR5O95071 2799 aaPredicted RBP8.84□□□□□ -0.99
MSH6-210ENST00000540021 RPL37AP8A6NKH3 93 aa8.84□□□□□ -0.99
MSH6-210ENST00000540021 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP8.84□□□□□ -0.99
MSH6-210ENST00000540021 TM2D3Q9BRN9 247 aa8.84□□□□□ -0.99
MSH6-210ENST00000540021 X6R8D5 127 aa8.83□□□□□ -1
MSH6-210ENST00000540021 NANOS2P60321 138 aaKnown RBP8.83□□□□□ -1
MSH6-210ENST00000540021 SERP1Q9Y6X1 66 aa8.83□□□□□ -1
MSH6-210ENST00000540021 KIAA0087Q14695 138 aa8.82□□□□□ -1
MSH6-210ENST00000540021 FAM30AQ9NZY2 134 aa8.82□□□□□ -1
MSH6-210ENST00000540021 C19orf73Q9NVV2 129 aa8.81□□□□□ -1
MSH6-210ENST00000540021 H3BQ85 93 aa8.81□□□□□ -1
MSH6-210ENST00000540021 WFDC10BQ8IUB3 73 aa8.81□□□□□ -1
MSH6-210ENST00000540021 C6orf48Q9UBA6 75 aa8.81□□□□□ -1
MSH6-210ENST00000540021 M0R378 163 aa8.8□□□□□ -1
MSH6-210ENST00000540021 NDUFC2-KCTD14E9PQ53 114 aa8.8□□□□□ -1
MSH6-210ENST00000540021 OBSCN-AS1Q96MR7 158 aa8.8□□□□□ -1
MSH6-210ENST00000540021 RETNQ9HD89 108 aa8.8□□□□□ -1
MSH6-210ENST00000540021 KPRPQ5T749 579 aaPredicted RBP8.8□□□□□ -1
MSH6-210ENST00000540021 TMEM254Q8TBM7 123 aa8.79□□□□□ -1
MSH6-210ENST00000540021 SMIM26A0A096LP01 95 aa8.79□□□□□ -1
MSH6-210ENST00000540021 Q6ZRU5 148 aa8.79□□□□□ -1
MSH6-210ENST00000540021 TEP1Q99973 2627 aaKnown RBP8.78□□□□□ -1
MSH6-210ENST00000540021 INAFM1C9JVW0 142 aa8.77□□□□□ -1
MSH6-210ENST00000540021 SYCNQ0VAF6 134 aa8.77□□□□□ -1
MSH6-210ENST00000540021 Q8NDZ9 215 aa8.77□□□□□ -1
MSH6-210ENST00000540021 TRBV7-6A0A0J9YX20 115 aa8.77□□□□□ -1.01
MSH6-210ENST00000540021 IGHV4-30-4P0DP06 118 aa8.76□□□□□ -1.01
MSH6-210ENST00000540021 HELZ2Q9BYK8 2649 aaKnown RBP8.76□□□□□ -1.01
MSH6-210ENST00000540021 FLNBO75369 2602 aaKnown RBP8.76□□□□□ -1.01
MSH6-210ENST00000540021 NDUFC1O43677 76 aa8.75□□□□□ -1.01
MSH6-210ENST00000540021 ITPR2Q14571 2701 aa8.75□□□□□ -1.01
MSH6-210ENST00000540021 CXCL6P80162 114 aa8.74□□□□□ -1.01
MSH6-210ENST00000540021 LYPD5Q6UWN5 251 aa8.74□□□□□ -1.01
MSH6-210ENST00000540021 LOC110117498A0A087WWA1 95 aa8.74□□□□□ -1.01
MSH6-210ENST00000540021 IGKV2-24A0A0C4DH68 120 aa8.74□□□□□ -1.01
MSH6-210ENST00000540021 LINC00474Q9P2X8 69 aa8.74□□□□□ -1.01
MSH6-210ENST00000540021 H7BZZ5 65 aa8.73□□□□□ -1.01
MSH6-210ENST00000540021 OXTP01178 125 aa8.73□□□□□ -1.01
MSH6-210ENST00000540021 C16orf95Q9H693 158 aa8.73□□□□□ -1.01
MSH6-210ENST00000540021 A0A096LNI7 61 aa8.73□□□□□ -1.01
MSH6-210ENST00000540021 EGFEM1PQ0D2K5 195 aa8.73□□□□□ -1.01
MSH6-210ENST00000540021 HIGD2AQ9BW72 106 aa8.73□□□□□ -1.01
MSH6-210ENST00000540021 IGLV6-57P01721 117 aa8.73□□□□□ -1.01
MSH6-210ENST00000540021 OXLD1Q5BKU9 147 aa8.73□□□□□ -1.01
MSH6-210ENST00000540021 Q6ZTC4 211 aa8.73□□□□□ -1.01
MSH6-210ENST00000540021 PSCAO43653 123 aa8.72□□□□□ -1.01
MSH6-210ENST00000540021 DEFB116Q30KQ4 102 aa8.72□□□□□ -1.01
MSH6-210ENST00000540021 PRYO14603 147 aa8.72□□□□□ -1.01
MSH6-210ENST00000540021 WFDC13Q8IUB5 93 aa8.72□□□□□ -1.01
MSH6-210ENST00000540021 DEFB131BA0A096LNP1 70 aa8.71□□□□□ -1.02
MSH6-210ENST00000540021 A0A0J9YWU9 116 aa8.71□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 449.5 ms