RNA–Protein interactions for RNA: ENST00000537606.5

SNX17-210, Transcript of sorting nexin 17, humanhuman

TSL 2 BASIC

Gene SNX17, Length 2,400 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX17-210ENST00000537606 C1orf43Q9BWL3 253 aa11.64□□□□□ -0.55
SNX17-210ENST00000537606 C6orf48Q9UBA6 75 aa11.64□□□□□ -0.55
SNX17-210ENST00000537606 NCR3O14931 201 aa11.64□□□□□ -0.55
SNX17-210ENST00000537606 DNAH9Q9NYC9 4486 aa11.63□□□□□ -0.55
SNX17-210ENST00000537606 ZNF561-AS1K7EIQ3 104 aa11.63□□□□□ -0.55
SNX17-210ENST00000537606 C15orf53Q8NAA6 179 aa11.62□□□□□ -0.55
SNX17-210ENST00000537606 LYSTQ99698 3801 aa11.62□□□□□ -0.55
SNX17-210ENST00000537606 LECT2O14960 151 aa11.62□□□□□ -0.55
SNX17-210ENST00000537606 C15orf56Q8N910 161 aa11.62□□□□□ -0.55
SNX17-210ENST00000537606 SLPIP03973 132 aa11.61□□□□□ -0.55
SNX17-210ENST00000537606 DNAH10OSP0CZ25 163 aa11.61□□□□□ -0.55
SNX17-210ENST00000537606 SCGB1A1P11684 91 aa11.6□□□□□ -0.55
SNX17-210ENST00000537606 CAMK2N2Q96S95 79 aa11.6□□□□□ -0.55
SNX17-210ENST00000537606 DNAL4O96015 105 aa11.6□□□□□ -0.55
SNX17-210ENST00000537606 XAGE1AQ9HD64 81 aa11.6□□□□□ -0.55
SNX17-210ENST00000537606 H0YGX0 51 aa11.59□□□□□ -0.55
SNX17-210ENST00000537606 C9orf129Q5T035 196 aaKnown RBP11.59□□□□□ -0.55
SNX17-210ENST00000537606 NDUFC2O95298 119 aa11.58□□□□□ -0.56
SNX17-210ENST00000537606 Q6ZRU5 148 aa11.58□□□□□ -0.56
SNX17-210ENST00000537606 TTC32Q5I0X7 151 aa11.57□□□□□ -0.56
SNX17-210ENST00000537606 GVQW2A0A096LPI5 108 aaPredicted RBP11.56□□□□□ -0.56
SNX17-210ENST00000537606 A0A1B0GV72 72 aa11.56□□□□□ -0.56
SNX17-210ENST00000537606 TMEM126AQ9H061 195 aa11.55□□□□□ -0.56
SNX17-210ENST00000537606 CASC10Q5T4H9 136 aa11.54□□□□□ -0.56
SNX17-210ENST00000537606 RPL18AQ02543 176 aaKnown RBP11.54□□□□□ -0.56
SNX17-210ENST00000537606 S100A7L2Q5SY68 101 aa11.54□□□□□ -0.56
SNX17-210ENST00000537606 TENM2Q9NT68 2774 aa11.53□□□□□ -0.56
SNX17-210ENST00000537606 SNCGO76070 127 aa11.53□□□□□ -0.56
SNX17-210ENST00000537606 C6orf99Q4VX62 202 aa11.53□□□□□ -0.56
SNX17-210ENST00000537606 GAGE2EQ4V326 116 aa11.51□□□□□ -0.57
SNX17-210ENST00000537606 GAGE2DQ9UEU5 116 aa11.51□□□□□ -0.57
SNX17-210ENST00000537606 DNAH1Q9P2D7 4330 aa11.51□□□□□ -0.57
SNX17-210ENST00000537606 FAM240AA0A1B0GVK7 77 aa11.51□□□□□ -0.57
SNX17-210ENST00000537606 CSMD3Q7Z407 3707 aa11.5□□□□□ -0.57
SNX17-210ENST00000537606 B9D2Q9BPU9 175 aa11.5□□□□□ -0.57
SNX17-210ENST00000537606 MUC7Q8TAX7 377 aa11.49□□□□□ -0.57
SNX17-210ENST00000537606 C2orf48Q96LS8 159 aa11.49□□□□□ -0.57
SNX17-210ENST00000537606 C14orf132Q9NPU4 83 aa11.49□□□□□ -0.57
SNX17-210ENST00000537606 GAGE2AQ6NT46 116 aa11.48□□□□□ -0.57
SNX17-210ENST00000537606 Q8N814 137 aa11.48□□□□□ -0.57
SNX17-210ENST00000537606 SMCR5Q8TEV8 140 aa11.48□□□□□ -0.57
SNX17-210ENST00000537606 SYCNQ0VAF6 134 aa11.48□□□□□ -0.57
SNX17-210ENST00000537606 Q6ZRP5 223 aa11.47□□□□□ -0.57
SNX17-210ENST00000537606 ORMDL1Q9P0S3 153 aa11.47□□□□□ -0.57
SNX17-210ENST00000537606 NDUFC2-KCTD14E9PQ53 114 aa11.47□□□□□ -0.57
SNX17-210ENST00000537606 DNHD1Q96M86 4753 aa11.46□□□□□ -0.57
SNX17-210ENST00000537606 USP17L23D6RBM5 183 aa11.46□□□□□ -0.57
SNX17-210ENST00000537606 GAGE2BQ13066 116 aa11.46□□□□□ -0.57
SNX17-210ENST00000537606 DNAH10Q8IVF4 4471 aa11.46□□□□□ -0.58
SNX17-210ENST00000537606 TRBV10-3A0A0K0K1G6 114 aa11.46□□□□□ -0.58
SNX17-210ENST00000537606 IGLV6-57P01721 117 aa11.46□□□□□ -0.58
SNX17-210ENST00000537606 INAFM2P0DMQ5 153 aa11.46□□□□□ -0.58
SNX17-210ENST00000537606 UPK3BQ9BT76 320 aa11.46□□□□□ -0.58
SNX17-210ENST00000537606 DNAH7Q8WXX0 4024 aa11.45□□□□□ -0.58
SNX17-210ENST00000537606 LINC00167Q96N53 147 aa11.44□□□□□ -0.58
SNX17-210ENST00000537606 KRTAP1-5Q9BYS1 174 aa11.44□□□□□ -0.58
SNX17-210ENST00000537606 PRKDCP78527 4128 aaKnown RBP11.43□□□□□ -0.58
SNX17-210ENST00000537606 ACYP1P07311 99 aa11.42□□□□□ -0.58
SNX17-210ENST00000537606 VPREB1P12018 145 aa11.42□□□□□ -0.58
SNX17-210ENST00000537606 OBSCN-AS1Q96MR7 158 aa11.42□□□□□ -0.58
SNX17-210ENST00000537606 APLNQ9ULZ1 77 aa11.42□□□□□ -0.58
SNX17-210ENST00000537606 LINC00575Q6W349 94 aa11.41□□□□□ -0.58
SNX17-210ENST00000537606 UBE2DNLQ8IWF7 75 aa11.41□□□□□ -0.58
SNX17-210ENST00000537606 PLECQ15149 4684 aaKnown RBP11.41□□□□□ -0.58
SNX17-210ENST00000537606 A0A1B0GX51 115 aa11.4□□□□□ -0.58
SNX17-210ENST00000537606 RMI2Q96E14 147 aa11.39□□□□□ -0.59
SNX17-210ENST00000537606 TRAV23DV6A0A075B6W5 121 aa11.39□□□□□ -0.59
SNX17-210ENST00000537606 MEGF8Q7Z7M0 2845 aa11.39□□□□□ -0.59
SNX17-210ENST00000537606 hADV29S1A0JD25 119 aa11.37□□□□□ -0.59
SNX17-210ENST00000537606 DYNC2H1Q8NCM8 4307 aaKnown RBP11.37□□□□□ -0.59
SNX17-210ENST00000537606 F8WDY8 70 aa11.36□□□□□ -0.59
SNX17-210ENST00000537606 TMEM256-PLSCR3K7ERE1 68 aa11.36□□□□□ -0.59
SNX17-210ENST00000537606 Q6Q795 121 aa11.36□□□□□ -0.59
SNX17-210ENST00000537606 ANAPC13Q9BS18 74 aa11.36□□□□□ -0.59
SNX17-210ENST00000537606 SERTAD4-AS1Q5TG53 156 aa11.35□□□□□ -0.59
SNX17-210ENST00000537606 SDIM1Q6ZPB5 146 aa11.35□□□□□ -0.59
SNX17-210ENST00000537606 M0R378 163 aa11.35□□□□□ -0.59
SNX17-210ENST00000537606 ZNF73O43830 326 aaPredicted RBP11.35□□□□□ -0.59
SNX17-210ENST00000537606 NDUFV3P56181 108 aaKnown RBP11.35□□□□□ -0.59
SNX17-210ENST00000537606 DIRC1Q969H9 104 aa11.35□□□□□ -0.59
SNX17-210ENST00000537606 LINC00643Q86TS7 51 aa11.34□□□□□ -0.59
SNX17-210ENST00000537606 LINC00846Q9NV44 126 aa11.34□□□□□ -0.59
SNX17-210ENST00000537606 NHLRC4P0CG21 123 aaPredicted RBP11.34□□□□□ -0.59
SNX17-210ENST00000537606 Q6ZQY7 126 aa11.34□□□□□ -0.59
SNX17-210ENST00000537606 FAM168BA1KXE4 195 aa11.33□□□□□ -0.6
SNX17-210ENST00000537606 TRBV7-7A0A0K0K1E9 115 aa11.33□□□□□ -0.6
SNX17-210ENST00000537606 STARD9Q9P2P6 4700 aa11.32□□□□□ -0.6
SNX17-210ENST00000537606 PSCAO43653 123 aa11.31□□□□□ -0.6
SNX17-210ENST00000537606 NKAPP1Q8N9T2 125 aa11.3□□□□□ -0.6
SNX17-210ENST00000537606 JMJD7-PLA2G4BH0Y9G9 81 aa11.29□□□□□ -0.6
SNX17-210ENST00000537606 TLX1NBP0CAT3 122 aa11.29□□□□□ -0.6
SNX17-210ENST00000537606 COX7BP24311 80 aa11.29□□□□□ -0.6
SNX17-210ENST00000537606 CCKP06307 115 aa11.29□□□□□ -0.6
SNX17-210ENST00000537606 ELOF1P60002 83 aaKnown RBP11.28□□□□□ -0.6
SNX17-210ENST00000537606 C7orf33Q8WU49 177 aa11.28□□□□□ -0.6
SNX17-210ENST00000537606 LAMTOR3Q9UHA4 124 aa11.28□□□□□ -0.6
SNX17-210ENST00000537606 NUPR2A6NF83 97 aa11.27□□□□□ -0.6
SNX17-210ENST00000537606 RPL37AP8A6NKH3 93 aa11.27□□□□□ -0.61
SNX17-210ENST00000537606 IGKV3D-7A0A0C4DH55 119 aa11.26□□□□□ -0.61
SNX17-210ENST00000537606 IGLV2-33A0A075B6J2 118 aaPredicted RBP11.26□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 72.5 ms