RNA–Protein interactions for RNA: ENST00000535871.1

CDCA3-205, Transcript of cell division cycle associated 3, humanhuman

TSL 5

Gene CDCA3, Length 454 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDCA3-205ENST00000535871 Q6ZRU5 148 aa4.23□□□□□ -1.73
CDCA3-205ENST00000535871 C9orf163Q8N9P6 203 aa4.23□□□□□ -1.73
CDCA3-205ENST00000535871 LINC00308Q8TCZ7 52 aa4.23□□□□□ -1.73
CDCA3-205ENST00000535871 C6orf48Q9UBA6 75 aa4.23□□□□□ -1.73
CDCA3-205ENST00000535871 CBY1Q9Y3M2 126 aa4.23□□□□□ -1.73
CDCA3-205ENST00000535871 A0A0B4J2C4 111 aa4.22□□□□□ -1.73
CDCA3-205ENST00000535871 TRBV10-2A0A0K0K1G8 114 aa4.22□□□□□ -1.73
CDCA3-205ENST00000535871 LOC107984640A0A0U1RRK4 108 aa4.22□□□□□ -1.73
CDCA3-205ENST00000535871 SMIM13P0DJ93 91 aa4.22□□□□□ -1.73
CDCA3-205ENST00000535871 HIGD2BQ4VC39 106 aa4.22□□□□□ -1.73
CDCA3-205ENST00000535871 BVES-AS1Q5T3Y7 98 aa4.22□□□□□ -1.73
CDCA3-205ENST00000535871 ADAMTSL4-AS1Q5T5F5 129 aa4.22□□□□□ -1.73
CDCA3-205ENST00000535871 MIR7-3HGQ8N6C7 128 aa4.22□□□□□ -1.73
CDCA3-205ENST00000535871 TRAV13-2A0A0B4J235 113 aa4.21□□□□□ -1.74
CDCA3-205ENST00000535871 C16orf90A8MZG2 172 aa4.21□□□□□ -1.74
CDCA3-205ENST00000535871 M0R2N4 97 aa4.21□□□□□ -1.74
CDCA3-205ENST00000535871 SLPIP03973 132 aa4.21□□□□□ -1.74
CDCA3-205ENST00000535871 C10orf25Q5T742 122 aa4.21□□□□□ -1.74
CDCA3-205ENST00000535871 SND1-IT1Q9HBX3 110 aa4.21□□□□□ -1.74
CDCA3-205ENST00000535871 IGLV5-37A0A075B6J1 123 aa4.2□□□□□ -1.74
CDCA3-205ENST00000535871 EPM2AB3EWF7 344 aa4.2□□□□□ -1.74
CDCA3-205ENST00000535871 RTL8CO15255 209 aa4.2□□□□□ -1.74
CDCA3-205ENST00000535871 PFN2P35080 140 aa4.2□□□□□ -1.74
CDCA3-205ENST00000535871 WFDC2Q14508 124 aa4.2□□□□□ -1.74
CDCA3-205ENST00000535871 COL5A1-AS1Q5SY13 56 aa4.2□□□□□ -1.74
CDCA3-205ENST00000535871 MUSTN1Q8IVN3 82 aa4.2□□□□□ -1.74
CDCA3-205ENST00000535871 PCP4L1A6NKN8 68 aa4.19□□□□□ -1.74
CDCA3-205ENST00000535871 FXYD2P54710 66 aa4.19□□□□□ -1.74
CDCA3-205ENST00000535871 SEC61BP60468 96 aaKnown RBP4.19□□□□□ -1.74
CDCA3-205ENST00000535871 SDIM1Q6ZPB5 146 aa4.19□□□□□ -1.74
CDCA3-205ENST00000535871 Q6ZRP5 223 aa4.19□□□□□ -1.74
CDCA3-205ENST00000535871 SNHG12Q9BXW3 62 aa4.19□□□□□ -1.74
CDCA3-205ENST00000535871 CFC1BP0CG36 223 aa4.18□□□□□ -1.74
CDCA3-205ENST00000535871 CFC1P0CG37 223 aa4.18□□□□□ -1.74
CDCA3-205ENST00000535871 C9orf116Q5BN46 136 aaPredicted RBP4.18□□□□□ -1.74
CDCA3-205ENST00000535871 SOSTDC1Q6X4U4 206 aa4.18□□□□□ -1.74
CDCA3-205ENST00000535871 LINC00526Q96FQ7 95 aa4.18□□□□□ -1.74
CDCA3-205ENST00000535871 KRTAP3-1Q9BYR8 98 aa4.18□□□□□ -1.74
CDCA3-205ENST00000535871 TMEM126AQ9H061 195 aa4.18□□□□□ -1.74
CDCA3-205ENST00000535871 PRO1854Q9UHT4 67 aa4.18□□□□□ -1.74
CDCA3-205ENST00000535871 LECT2O14960 151 aa4.17□□□□□ -1.74
CDCA3-205ENST00000535871 HINT1P49773 126 aaPredicted RBP4.17□□□□□ -1.74
CDCA3-205ENST00000535871 IGLV5-52A0A0A0MRZ9 124 aa4.16□□□□□ -1.74
CDCA3-205ENST00000535871 M0R378 163 aa4.16□□□□□ -1.74
CDCA3-205ENST00000535871 IGLV6-57P01721 117 aa4.16□□□□□ -1.74
CDCA3-205ENST00000535871 LYRM7Q5U5X0 104 aa4.16□□□□□ -1.74
CDCA3-205ENST00000535871 DAND5Q8N907 189 aa4.16□□□□□ -1.74
CDCA3-205ENST00000535871 RAB37Q96AX2 223 aa4.16□□□□□ -1.74
CDCA3-205ENST00000535871 NHP2Q9NX24 153 aaKnown RBP4.16□□□□□ -1.74
CDCA3-205ENST00000535871 SACSQ9NZJ4 4579 aa4.15□□□□□ -1.74
CDCA3-205ENST00000535871 DNAH2Q9P225 4427 aa4.15□□□□□ -1.74
CDCA3-205ENST00000535871 IGLV2-33A0A075B6J2 118 aaPredicted RBP4.15□□□□□ -1.75
CDCA3-205ENST00000535871 IGKV2-28A0A075B6P5 120 aa4.15□□□□□ -1.75
CDCA3-205ENST00000535871 TRBV7-6A0A0J9YX20 115 aa4.15□□□□□ -1.75
CDCA3-205ENST00000535871 A0A0U1RRA0 63 aa4.15□□□□□ -1.75
CDCA3-205ENST00000535871 IGKV2D-28P01615 120 aa4.15□□□□□ -1.75
CDCA3-205ENST00000535871 RPL18AQ02543 176 aaKnown RBP4.15□□□□□ -1.75
CDCA3-205ENST00000535871 C9orf129Q5T035 196 aaKnown RBP4.15□□□□□ -1.75
CDCA3-205ENST00000535871 Q6ZSA8 131 aa4.15□□□□□ -1.75
CDCA3-205ENST00000535871 Q75L30 129 aa4.15□□□□□ -1.75
CDCA3-205ENST00000535871 DNAH17Q9UFH2 4485 aa4.15□□□□□ -1.75
CDCA3-205ENST00000535871 DNAH10Q8IVF4 4471 aa4.15□□□□□ -1.75
CDCA3-205ENST00000535871 COX6CP09669 75 aa4.14□□□□□ -1.75
CDCA3-205ENST00000535871 RPL28P46779 137 aaKnown RBP4.14□□□□□ -1.75
CDCA3-205ENST00000535871 LINC00337Q8N6G1 96 aa4.14□□□□□ -1.75
CDCA3-205ENST00000535871 SPACA4Q8TDM5 124 aa4.14□□□□□ -1.75
CDCA3-205ENST00000535871 KCNQ1DNQ9H478 68 aa4.14□□□□□ -1.75
CDCA3-205ENST00000535871 XAGE1AQ9HD64 81 aa4.14□□□□□ -1.75
CDCA3-205ENST00000535871 FRAS1Q86XX4 4008 aa4.13□□□□□ -1.75
CDCA3-205ENST00000535871 TRBV20-1A0A075B6N2 111 aa4.13□□□□□ -1.75
CDCA3-205ENST00000535871 A0A096LNI7 61 aa4.13□□□□□ -1.75
CDCA3-205ENST00000535871 A0A1B0GX51 115 aa4.13□□□□□ -1.75
CDCA3-205ENST00000535871 H0YGX0 51 aa4.13□□□□□ -1.75
CDCA3-205ENST00000535871 TAX1BP3O14907 124 aa4.13□□□□□ -1.75
CDCA3-205ENST00000535871 KRTAP19-4Q3LI73 84 aa4.13□□□□□ -1.75
CDCA3-205ENST00000535871 NKAPP1Q8N9T2 125 aa4.13□□□□□ -1.75
CDCA3-205ENST00000535871 PLAC8Q9NZF1 115 aa4.13□□□□□ -1.75
CDCA3-205ENST00000535871 A0A1B0GVY2 172 aa4.12□□□□□ -1.75
CDCA3-205ENST00000535871 NPC2P61916 151 aa4.12□□□□□ -1.75
CDCA3-205ENST00000535871 VAMP3Q15836 100 aa4.12□□□□□ -1.75
CDCA3-205ENST00000535871 BATFQ16520 125 aa4.12□□□□□ -1.75
CDCA3-205ENST00000535871 S100A7L2Q5SY68 101 aa4.12□□□□□ -1.75
CDCA3-205ENST00000535871 MRPL55Q7Z7F7 128 aaKnown RBP4.12□□□□□ -1.75
CDCA3-205ENST00000535871 HECTD4Q9Y4D8 3996 aa4.12□□□□□ -1.75
CDCA3-205ENST00000535871 IGLV1-50A0A075B6I6 118 aa4.11□□□□□ -1.75
CDCA3-205ENST00000535871 H0Y9J4 135 aa4.11□□□□□ -1.75
CDCA3-205ENST00000535871 H3BQ85 93 aa4.11□□□□□ -1.75
CDCA3-205ENST00000535871 SNCGO76070 127 aa4.11□□□□□ -1.75
CDCA3-205ENST00000535871 TSPAN13O95857 204 aa4.11□□□□□ -1.75
CDCA3-205ENST00000535871 SPRR1AP35321 89 aa4.11□□□□□ -1.75
CDCA3-205ENST00000535871 RPL13AP40429 203 aaKnown RBP4.11□□□□□ -1.75
CDCA3-205ENST00000535871 C22orf24Q9Y442 160 aa4.11□□□□□ -1.75
CDCA3-205ENST00000535871 FAT2Q9NYQ8 4349 aa4.11□□□□□ -1.75
CDCA3-205ENST00000535871 KMT2CQ8NEZ4 4911 aaKnown RBP4.11□□□□□ -1.75
CDCA3-205ENST00000535871 TRAV23DV6A0A075B6W5 121 aa4.1□□□□□ -1.75
CDCA3-205ENST00000535871 A0A1W2PPM0 123 aa4.1□□□□□ -1.75
CDCA3-205ENST00000535871 M0QXV9 152 aa4.1□□□□□ -1.75
CDCA3-205ENST00000535871 INAFM2P0DMQ5 153 aa4.1□□□□□ -1.75
CDCA3-205ENST00000535871 FABP2P12104 132 aa4.1□□□□□ -1.75
CDCA3-205ENST00000535871 KRTAP10-2P60368 255 aa4.1□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 77.2 ms