RNA–Protein interactions for RNA: ENST00000533096.5

COPB1-209, Transcript of coatomer protein complex subunit beta 1, humanhuman

TSL 4

Gene COPB1, Length 547 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPB1-209ENST00000533096 SMCR5Q8TEV8 140 aa7.3□□□□□ -1.24
COPB1-209ENST00000533096 FSIP2Q5CZC0 6907 aa7.29□□□□□ -1.24
COPB1-209ENST00000533096 A0A0U1RRA0 63 aa7.29□□□□□ -1.24
COPB1-209ENST00000533096 SPINK1P00995 79 aa7.29□□□□□ -1.24
COPB1-209ENST00000533096 ANAPC16Q96DE5 110 aa7.29□□□□□ -1.24
COPB1-209ENST00000533096 ZNF706Q9Y5V0 76 aaPredicted RBP7.29□□□□□ -1.24
COPB1-209ENST00000533096 A0A1B0GVG6 124 aa7.28□□□□□ -1.24
COPB1-209ENST00000533096 LINC00158P58513 81 aa7.28□□□□□ -1.24
COPB1-209ENST00000533096 GAGE2AQ6NT46 116 aa7.27□□□□□ -1.25
COPB1-209ENST00000533096 NDUFA12Q9UI09 145 aa7.27□□□□□ -1.25
COPB1-209ENST00000533096 IGLV9-49A0A0B4J1Y8 123 aa7.26□□□□□ -1.25
COPB1-209ENST00000533096 COX17Q14061 63 aa7.26□□□□□ -1.25
COPB1-209ENST00000533096 IGLV5-39A0A0G2JS06 123 aa7.25□□□□□ -1.25
COPB1-209ENST00000533096 LCE2CQ5TA81 110 aa7.25□□□□□ -1.25
COPB1-209ENST00000533096 FA2HQ7L5A8 372 aa7.24□□□□□ -1.25
COPB1-209ENST00000533096 SMCO4Q9NRQ5 59 aa7.24□□□□□ -1.25
COPB1-209ENST00000533096 ETDCA0A1B0GVM5 59 aa7.23□□□□□ -1.25
COPB1-209ENST00000533096 LINC01549A6NIU2 74 aa7.23□□□□□ -1.25
COPB1-209ENST00000533096 ATP6V1G1O75348 118 aa7.23□□□□□ -1.25
COPB1-209ENST00000533096 IGLC3P0DOY3 106 aa7.23□□□□□ -1.25
COPB1-209ENST00000533096 ZNF22P17026 224 aaPredicted RBP7.23□□□□□ -1.25
COPB1-209ENST00000533096 MOBPQ13875 183 aa7.23□□□□□ -1.25
COPB1-209ENST00000533096 NCR3O14931 201 aa7.22□□□□□ -1.25
COPB1-209ENST00000533096 TMEM170BQ5T4T1 132 aa7.22□□□□□ -1.25
COPB1-209ENST00000533096 Q8N377 158 aa7.22□□□□□ -1.25
COPB1-209ENST00000533096 BOD1L2Q8IYS8 172 aa7.21□□□□□ -1.26
COPB1-209ENST00000533096 SLC25A20O43772 301 aa7.2□□□□□ -1.26
COPB1-209ENST00000533096 MT1HP80294 61 aa7.2□□□□□ -1.26
COPB1-209ENST00000533096 XP32Q5T750 250 aa7.2□□□□□ -1.26
COPB1-209ENST00000533096 BAGE3Q86Y29 109 aa7.2□□□□□ -1.26
COPB1-209ENST00000533096 LINC01546A6NGU7 62 aa7.19□□□□□ -1.26
COPB1-209ENST00000533096 PRYO14603 147 aa7.19□□□□□ -1.26
COPB1-209ENST00000533096 FABP9Q0Z7S8 132 aa7.19□□□□□ -1.26
COPB1-209ENST00000533096 SSBP3-AS1Q7Z2R9 100 aa7.19□□□□□ -1.26
COPB1-209ENST00000533096 IGLV8-61A0A075B6I0 122 aa7.18□□□□□ -1.26
COPB1-209ENST00000533096 ERC2-IT1O76042 136 aa7.18□□□□□ -1.26
COPB1-209ENST00000533096 SMIM13P0DJ93 91 aa7.18□□□□□ -1.26
COPB1-209ENST00000533096 PCOTHQ58A44 107 aa7.18□□□□□ -1.26
COPB1-209ENST00000533096 FAM19A2Q8N3H0 131 aa7.18□□□□□ -1.26
COPB1-209ENST00000533096 TRBV10-3A0A0K0K1G6 114 aa7.17□□□□□ -1.26
COPB1-209ENST00000533096 C11orf86A6NJI1 115 aa7.17□□□□□ -1.26
COPB1-209ENST00000533096 PMCHL1Q16048 86 aa7.17□□□□□ -1.26
COPB1-209ENST00000533096 LINC00483Q53H64 154 aa7.17□□□□□ -1.26
COPB1-209ENST00000533096 KCNQ1DNQ9H478 68 aa7.17□□□□□ -1.26
COPB1-209ENST00000533096 CFC1BP0CG36 223 aa7.16□□□□□ -1.26
COPB1-209ENST00000533096 MEIG1Q5JSS6 88 aa7.16□□□□□ -1.26
COPB1-209ENST00000533096 SFTA2Q6UW10 78 aa7.16□□□□□ -1.26
COPB1-209ENST00000533096 SPRR1AP35321 89 aa7.15□□□□□ -1.26
COPB1-209ENST00000533096 SMCPP49901 116 aaPredicted RBP7.15□□□□□ -1.26
COPB1-209ENST00000533096 S100A12P80511 92 aa7.15□□□□□ -1.26
COPB1-209ENST00000533096 KRTAP19-2Q3LHN2 52 aa7.15□□□□□ -1.26
COPB1-209ENST00000533096 C9orf153Q5TBE3 101 aa7.15□□□□□ -1.26
COPB1-209ENST00000533096 C9orf92A6NGG3 77 aa7.14□□□□□ -1.27
COPB1-209ENST00000533096 B5MCH6 92 aa7.14□□□□□ -1.27
COPB1-209ENST00000533096 KRTAP4-16G5E9R7 235 aaPredicted RBP7.14□□□□□ -1.27
COPB1-209ENST00000533096 M0R2T5 61 aa7.14□□□□□ -1.27
COPB1-209ENST00000533096 S100PP25815 95 aa7.14□□□□□ -1.27
COPB1-209ENST00000533096 RPS29P62273 56 aaKnown RBP7.14□□□□□ -1.27
COPB1-209ENST00000533096 MIR7-3HGQ8N6C7 128 aa7.14□□□□□ -1.27
COPB1-209ENST00000533096 A0A096LNJ9 63 aa7.13□□□□□ -1.27
COPB1-209ENST00000533096 LINC00614P0C842 121 aa7.13□□□□□ -1.27
COPB1-209ENST00000533096 CHTOPQ9Y3Y2 248 aaKnown RBP7.13□□□□□ -1.27
COPB1-209ENST00000533096 HRCT1Q6UXD1 115 aa7.12□□□□□ -1.27
COPB1-209ENST00000533096 TRAV9-1A0A075B6T8 112 aa7.11□□□□□ -1.27
COPB1-209ENST00000533096 HBDP02042 147 aa7.11□□□□□ -1.27
COPB1-209ENST00000533096 KRTAP10-6P60371 365 aaPredicted RBP7.11□□□□□ -1.27
COPB1-209ENST00000533096 URB1-AS1Q96HZ7 61 aa7.1□□□□□ -1.27
COPB1-209ENST00000533096 Q9BRP9 147 aa7.1□□□□□ -1.27
COPB1-209ENST00000533096 TMEM223A0PJW6 202 aa7.09□□□□□ -1.27
COPB1-209ENST00000533096 LORP23490 312 aaPredicted RBP7.09□□□□□ -1.27
COPB1-209ENST00000533096 DDTP30046 118 aa7.09□□□□□ -1.27
COPB1-209ENST00000533096 SEC11CQ9BY50 192 aa7.09□□□□□ -1.27
COPB1-209ENST00000533096 COX19Q49B96 90 aa7.07□□□□□ -1.28
COPB1-209ENST00000533096 ST20-AS1Q8NBB2 130 aa7.07□□□□□ -1.28
COPB1-209ENST00000533096 COX6B2Q6YFQ2 88 aa7.06□□□□□ -1.28
COPB1-209ENST00000533096 Q6ZRX8 168 aa7.06□□□□□ -1.28
COPB1-209ENST00000533096 C18orf32Q8TCD1 76 aa7.06□□□□□ -1.28
COPB1-209ENST00000533096 MAP1LC3CQ9BXW4 147 aa7.06□□□□□ -1.28
COPB1-209ENST00000533096 TMEM218A2RU14 115 aa7.05□□□□□ -1.28
COPB1-209ENST00000533096 LINC00587B1AMM8 73 aa7.05□□□□□ -1.28
COPB1-209ENST00000533096 HERV-K104P63124 156 aa7.05□□□□□ -1.28
COPB1-209ENST00000533096 S100A7L2Q5SY68 101 aa7.05□□□□□ -1.28
COPB1-209ENST00000533096 TRAPPC1Q9Y5R8 145 aa7.05□□□□□ -1.28
COPB1-209ENST00000533096 MYMXA0A1B0GTQ4 84 aa7.04□□□□□ -1.28
COPB1-209ENST00000533096 IGLV6-57P01721 117 aa7.03□□□□□ -1.28
COPB1-209ENST00000533096 JOSD1Q15040 202 aaPredicted RBP7.03□□□□□ -1.28
COPB1-209ENST00000533096 LIMD2Q9BT23 127 aa7.02□□□□□ -1.29
COPB1-209ENST00000533096 RPS10P5Q9NQ39 176 aa7.02□□□□□ -1.29
COPB1-209ENST00000533096 IFI27L1Q96BM0 104 aa7.01□□□□□ -1.29
COPB1-209ENST00000533096 TRBV10-2A0A0K0K1G8 114 aa7□□□□□ -1.29
COPB1-209ENST00000533096 H0Y8G0 127 aa7□□□□□ -1.29
COPB1-209ENST00000533096 MIEN1Q9BRT3 115 aa7□□□□□ -1.29
COPB1-209ENST00000533096 TRAV23DV6A0A075B6W5 121 aa6.99□□□□□ -1.29
COPB1-209ENST00000533096 TRAV12-1A0A0B4J245 112 aa6.99□□□□□ -1.29
COPB1-209ENST00000533096 H7C2G1 150 aa6.99□□□□□ -1.29
COPB1-209ENST00000533096 NPC2P61916 151 aa6.99□□□□□ -1.29
COPB1-209ENST00000533096 ZNF73O43830 326 aaPredicted RBP6.98□□□□□ -1.29
COPB1-209ENST00000533096 CLLU1Q5K131 121 aa6.98□□□□□ -1.29
COPB1-209ENST00000533096 SPANXB1Q9NS25 103 aaPredicted RBP6.98□□□□□ -1.29
COPB1-209ENST00000533096 HINT1P49773 126 aaPredicted RBP6.97□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 117.2 ms