RNA–Protein interactions for RNA: ENST00000532600.1

SSH3-209, Transcript of slingshot protein phosphatase 3, humanhuman

TSL 4

Gene SSH3, Length 555 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSH3-209ENST00000532600 C9orf129Q5T035 196 aaKnown RBP11.56□□□□□ -0.56
SSH3-209ENST00000532600 FAM19A5Q7Z5A7 132 aaPredicted RBP11.56□□□□□ -0.56
SSH3-209ENST00000532600 LEPROTO15243 131 aa11.55□□□□□ -0.56
SSH3-209ENST00000532600 E9PLD3 99 aa11.52□□□□□ -0.57
SSH3-209ENST00000532600 J3QQQ9 107 aa11.52□□□□□ -0.57
SSH3-209ENST00000532600 IGLV7-43P04211 117 aa11.52□□□□□ -0.57
SSH3-209ENST00000532600 HERVK_113P61574 105 aa11.52□□□□□ -0.57
SSH3-209ENST00000532600 ATOH7Q8N100 152 aa11.52□□□□□ -0.57
SSH3-209ENST00000532600 PLEKHB2Q96CS7 222 aa11.52□□□□□ -0.57
SSH3-209ENST00000532600 XAGE1AQ9HD64 81 aa11.52□□□□□ -0.57
SSH3-209ENST00000532600 NDUFA12Q9UI09 145 aa11.52□□□□□ -0.57
SSH3-209ENST00000532600 ERG28Q9UKR5 140 aa11.52□□□□□ -0.57
SSH3-209ENST00000532600 C20orf202A1L168 122 aa11.51□□□□□ -0.57
SSH3-209ENST00000532600 PFN2P35080 140 aa11.51□□□□□ -0.57
SSH3-209ENST00000532600 TMA7Q9Y2S6 64 aaKnown RBP11.51□□□□□ -0.57
SSH3-209ENST00000532600 IGKV2D-26A0A0A0MRZ7 120 aa11.5□□□□□ -0.57
SSH3-209ENST00000532600 SFTA2Q6UW10 78 aa11.49□□□□□ -0.57
SSH3-209ENST00000532600 M0QXV9 152 aa11.48□□□□□ -0.57
SSH3-209ENST00000532600 ANKRD39Q53RE8 183 aa11.48□□□□□ -0.57
SSH3-209ENST00000532600 A0A0U1RRA0 63 aa11.46□□□□□ -0.57
SSH3-209ENST00000532600 MYMXA0A1B0GTQ4 84 aa11.46□□□□□ -0.57
SSH3-209ENST00000532600 SMIM13P0DJ93 91 aa11.46□□□□□ -0.57
SSH3-209ENST00000532600 LGALS3P17931 250 aaKnown RBP11.46□□□□□ -0.57
SSH3-209ENST00000532600 TTTY13Q9BZ97 58 aa11.46□□□□□ -0.57
SSH3-209ENST00000532600 HERV-K104P63124 156 aa11.45□□□□□ -0.58
SSH3-209ENST00000532600 COX17Q14061 63 aa11.45□□□□□ -0.58
SSH3-209ENST00000532600 SND1-IT1Q9HBX3 110 aa11.45□□□□□ -0.58
SSH3-209ENST00000532600 RNF213Q63HN8 5207 aa11.45□□□□□ -0.58
SSH3-209ENST00000532600 H0Y9J4 135 aa11.44□□□□□ -0.58
SSH3-209ENST00000532600 NMUP48645 174 aa11.44□□□□□ -0.58
SSH3-209ENST00000532600 DIRC1Q969H9 104 aa11.44□□□□□ -0.58
SSH3-209ENST00000532600 KRTAP1-4P0C5Y4 121 aa11.43□□□□□ -0.58
SSH3-209ENST00000532600 LINC00158P58513 81 aa11.43□□□□□ -0.58
SSH3-209ENST00000532600 PRR26Q8N8Z3 221 aa11.43□□□□□ -0.58
SSH3-209ENST00000532600 Q8NDZ9 215 aa11.43□□□□□ -0.58
SSH3-209ENST00000532600 UBE2BP63146 152 aa11.42□□□□□ -0.58
SSH3-209ENST00000532600 MEIG1Q5JSS6 88 aa11.42□□□□□ -0.58
SSH3-209ENST00000532600 A0A0J9YXY3 114 aa11.41□□□□□ -0.58
SSH3-209ENST00000532600 MIR7-3HGQ8N6C7 128 aa11.4□□□□□ -0.58
SSH3-209ENST00000532600 C22orf24Q9Y442 160 aa11.4□□□□□ -0.58
SSH3-209ENST00000532600 SCGB1D1O95968 90 aa11.39□□□□□ -0.59
SSH3-209ENST00000532600 AKR1D1P51857 326 aa11.39□□□□□ -0.59
SSH3-209ENST00000532600 DAND5Q8N907 189 aa11.39□□□□□ -0.59
SSH3-209ENST00000532600 PCP2Q8IVA1 136 aa11.38□□□□□ -0.59
SSH3-209ENST00000532600 ZNF815PA8K554 130 aa11.37□□□□□ -0.59
SSH3-209ENST00000532600 ADAMTSL4-AS1Q5T5F5 129 aa11.37□□□□□ -0.59
SSH3-209ENST00000532600 LITAFQ99732 161 aa11.37□□□□□ -0.59
SSH3-209ENST00000532600 IGLV5-37A0A075B6J1 123 aa11.36□□□□□ -0.59
SSH3-209ENST00000532600 VPREB1P12018 145 aa11.36□□□□□ -0.59
SSH3-209ENST00000532600 LINC00587B1AMM8 73 aa11.35□□□□□ -0.59
SSH3-209ENST00000532600 LPAP08519 4548 aa11.34□□□□□ -0.59
SSH3-209ENST00000532600 EIF4EBP3O60516 100 aaPredicted RBP11.34□□□□□ -0.59
SSH3-209ENST00000532600 TP73-AS1Q9UF72 201 aa11.34□□□□□ -0.59
SSH3-209ENST00000532600 JOSD1Q15040 202 aaPredicted RBP11.33□□□□□ -0.6
SSH3-209ENST00000532600 SOSTDC1Q6X4U4 206 aa11.33□□□□□ -0.6
SSH3-209ENST00000532600 ZNF861PO60384 105 aa11.32□□□□□ -0.6
SSH3-209ENST00000532600 MRPL55Q7Z7F7 128 aaKnown RBP11.32□□□□□ -0.6
SSH3-209ENST00000532600 IGLV1-50A0A075B6I6 118 aa11.31□□□□□ -0.6
SSH3-209ENST00000532600 LOC107984156A0A0G2JMH3 177 aa11.31□□□□□ -0.6
SSH3-209ENST00000532600 GAGE10A6NGK3 116 aa11.31□□□□□ -0.6
SSH3-209ENST00000532600 LBHQ53QV2 105 aaPredicted RBP11.31□□□□□ -0.6
SSH3-209ENST00000532600 ARL17AQ8IVW1 177 aa11.31□□□□□ -0.6
SSH3-209ENST00000532600 LINC00167Q96N53 147 aa11.31□□□□□ -0.6
SSH3-209ENST00000532600 TIMM17BO60830 172 aa11.3□□□□□ -0.6
SSH3-209ENST00000532600 BOD1L2Q8IYS8 172 aa11.3□□□□□ -0.6
SSH3-209ENST00000532600 HSBP1L1C9JCN9 74 aa11.29□□□□□ -0.6
SSH3-209ENST00000532600 NPC2P61916 151 aa11.29□□□□□ -0.6
SSH3-209ENST00000532600 PYY3Q5JQD4 70 aa11.29□□□□□ -0.6
SSH3-209ENST00000532600 RPL37AP8A6NKH3 93 aa11.28□□□□□ -0.6
SSH3-209ENST00000532600 RPL24P83731 157 aaKnown RBP11.28□□□□□ -0.6
SSH3-209ENST00000532600 NKAPP1Q8N9T2 125 aa11.28□□□□□ -0.6
SSH3-209ENST00000532600 NCR3O14931 201 aa11.25□□□□□ -0.61
SSH3-209ENST00000532600 BCE1O60756 84 aa11.25□□□□□ -0.61
SSH3-209ENST00000532600 SCGB1D4Q6XE38 83 aa11.25□□□□□ -0.61
SSH3-209ENST00000532600 LINC00308Q8TCZ7 52 aa11.25□□□□□ -0.61
SSH3-209ENST00000532600 PAM16Q9Y3D7 125 aa11.25□□□□□ -0.61
SSH3-209ENST00000532600 IGKV2-28A0A075B6P5 120 aa11.23□□□□□ -0.61
SSH3-209ENST00000532600 IGKV2D-28P01615 120 aa11.23□□□□□ -0.61
SSH3-209ENST00000532600 KRTAP13-1Q8IUC0 172 aa11.23□□□□□ -0.61
SSH3-209ENST00000532600 SPANXDQ9BXN6 97 aa11.23□□□□□ -0.61
SSH3-209ENST00000532600 SPANXCQ9NY87 97 aa11.23□□□□□ -0.61
SSH3-209ENST00000532600 M0R378 163 aa11.22□□□□□ -0.61
SSH3-209ENST00000532600 COX8AP10176 69 aa11.22□□□□□ -0.61
SSH3-209ENST00000532600 SPATA45Q537H7 98 aa11.22□□□□□ -0.61
SSH3-209ENST00000532600 VAMP8Q9BV40 100 aa11.22□□□□□ -0.61
SSH3-209ENST00000532600 A0A087X002 238 aa11.21□□□□□ -0.61
SSH3-209ENST00000532600 RPL13AP40429 203 aaKnown RBP11.21□□□□□ -0.61
SSH3-209ENST00000532600 MIEN1Q9BRT3 115 aa11.21□□□□□ -0.61
SSH3-209ENST00000532600 TMEM238C9JI98 176 aa11.2□□□□□ -0.62
SSH3-209ENST00000532600 NDUFC2O95298 119 aa11.2□□□□□ -0.62
SSH3-209ENST00000532600 RPL28P46779 137 aaKnown RBP11.2□□□□□ -0.62
SSH3-209ENST00000532600 C14orf144Q96I85 54 aa11.2□□□□□ -0.62
SSH3-209ENST00000532600 SPANXB1Q9NS25 103 aaPredicted RBP11.18□□□□□ -0.62
SSH3-209ENST00000532600 TRBV10-3A0A0K0K1G6 114 aa11.17□□□□□ -0.62
SSH3-209ENST00000532600 TRBV10-2A0A0K0K1G8 114 aa11.17□□□□□ -0.62
SSH3-209ENST00000532600 DLEU1O43261 78 aa11.17□□□□□ -0.62
SSH3-209ENST00000532600 ANAPC11Q9NYG5 84 aa11.17□□□□□ -0.62
SSH3-209ENST00000532600 MUSTN1Q8IVN3 82 aa11.16□□□□□ -0.62
SSH3-209ENST00000532600 TMEM126AQ9H061 195 aa11.15□□□□□ -0.62
SSH3-209ENST00000532600 Q6ZVH6 145 aa11.14□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 76.7 ms