RNA–Protein interactions for RNA: ENST00000532088.1

COPB1-208, Transcript of coatomer protein complex subunit beta 1, humanhuman

TSL 3

Gene COPB1, Length 510 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPB1-208ENST00000532088 A0A0J9YXY3 114 aa7.99□□□□□ -1.13
COPB1-208ENST00000532088 DLEU1O43261 78 aa7.99□□□□□ -1.13
COPB1-208ENST00000532088 KRTAP10-1P60331 282 aa7.99□□□□□ -1.13
COPB1-208ENST00000532088 CTAG1AP78358 180 aa7.99□□□□□ -1.13
COPB1-208ENST00000532088 C9orf116Q5BN46 136 aaPredicted RBP7.99□□□□□ -1.13
COPB1-208ENST00000532088 MEIG1Q5JSS6 88 aa7.99□□□□□ -1.13
COPB1-208ENST00000532088 COX8AP10176 69 aa7.98□□□□□ -1.13
COPB1-208ENST00000532088 RPL18AQ02543 176 aaKnown RBP7.98□□□□□ -1.13
COPB1-208ENST00000532088 LINC01620Q4KN68 170 aa7.98□□□□□ -1.13
COPB1-208ENST00000532088 SPATA45Q537H7 98 aa7.98□□□□□ -1.13
COPB1-208ENST00000532088 SPACA4Q8TDM5 124 aa7.98□□□□□ -1.13
COPB1-208ENST00000532088 A0A096LNI7 61 aa7.97□□□□□ -1.13
COPB1-208ENST00000532088 S100A12P80511 92 aa7.97□□□□□ -1.13
COPB1-208ENST00000532088 GAGE2BQ13066 116 aa7.97□□□□□ -1.13
COPB1-208ENST00000532088 LCE5AQ5TCM9 118 aa7.97□□□□□ -1.13
COPB1-208ENST00000532088 PCP2Q8IVA1 136 aa7.97□□□□□ -1.13
COPB1-208ENST00000532088 BOD1L2Q8IYS8 172 aa7.97□□□□□ -1.13
COPB1-208ENST00000532088 TTTY13Q9BZ97 58 aa7.97□□□□□ -1.13
COPB1-208ENST00000532088 PAM16Q9Y3D7 125 aa7.97□□□□□ -1.13
COPB1-208ENST00000532088 EPPK1P58107 5090 aaKnown RBP7.96□□□□□ -1.13
COPB1-208ENST00000532088 SMIM13P0DJ93 91 aa7.96□□□□□ -1.14
COPB1-208ENST00000532088 PFN2P35080 140 aa7.96□□□□□ -1.14
COPB1-208ENST00000532088 LINC00158P58513 81 aa7.96□□□□□ -1.14
COPB1-208ENST00000532088 KRTAP4-11Q9BYQ6 195 aa7.96□□□□□ -1.14
COPB1-208ENST00000532088 LOC107984156A0A0G2JMH3 177 aa7.95□□□□□ -1.14
COPB1-208ENST00000532088 EPM2AB3EWF7 344 aa7.95□□□□□ -1.14
COPB1-208ENST00000532088 SCGB1D4Q6XE38 83 aa7.95□□□□□ -1.14
COPB1-208ENST00000532088 Q6ZVH6 145 aa7.95□□□□□ -1.14
COPB1-208ENST00000532088 ARL17AQ8IVW1 177 aa7.95□□□□□ -1.14
COPB1-208ENST00000532088 IGKV2-24A0A0C4DH68 120 aa7.94□□□□□ -1.14
COPB1-208ENST00000532088 TMEM238C9JI98 176 aa7.94□□□□□ -1.14
COPB1-208ENST00000532088 GAGE2EQ4V326 116 aa7.94□□□□□ -1.14
COPB1-208ENST00000532088 MIR7-3HGQ8N6C7 128 aa7.94□□□□□ -1.14
COPB1-208ENST00000532088 LITAFQ99732 161 aa7.94□□□□□ -1.14
COPB1-208ENST00000532088 PPDPFQ9H3Y8 114 aa7.94□□□□□ -1.14
COPB1-208ENST00000532088 SND1-IT1Q9HBX3 110 aa7.94□□□□□ -1.14
COPB1-208ENST00000532088 PLAC8Q9NZF1 115 aa7.94□□□□□ -1.14
COPB1-208ENST00000532088 GAGE2DQ9UEU5 116 aa7.94□□□□□ -1.14
COPB1-208ENST00000532088 C9orf129Q5T035 196 aaKnown RBP7.93□□□□□ -1.14
COPB1-208ENST00000532088 SLC25A34Q6PIV7 304 aa7.93□□□□□ -1.14
COPB1-208ENST00000532088 SPANXDQ9BXN6 97 aa7.93□□□□□ -1.14
COPB1-208ENST00000532088 SPANXCQ9NY87 97 aa7.93□□□□□ -1.14
COPB1-208ENST00000532088 APOBP04114 4563 aaKnown RBP7.93□□□□□ -1.14
COPB1-208ENST00000532088 PANO1I0J062 215 aa7.92□□□□□ -1.14
COPB1-208ENST00000532088 CDK2AP2O75956 126 aa7.92□□□□□ -1.14
COPB1-208ENST00000532088 CHTF8P0CG12 524 aa7.92□□□□□ -1.14
COPB1-208ENST00000532088 COPS9Q8WXC6 57 aa7.92□□□□□ -1.14
COPB1-208ENST00000532088 SPANXB1Q9NS25 103 aaPredicted RBP7.92□□□□□ -1.14
COPB1-208ENST00000532088 A0A087WYN8 130 aa7.91□□□□□ -1.14
COPB1-208ENST00000532088 ADAMTSL4-AS1Q5T5F5 129 aa7.91□□□□□ -1.14
COPB1-208ENST00000532088 XAGE1AQ9HD64 81 aa7.91□□□□□ -1.14
COPB1-208ENST00000532088 HIGD1BQ9P298 99 aa7.91□□□□□ -1.14
COPB1-208ENST00000532088 IGLV5-37A0A075B6J1 123 aa7.9□□□□□ -1.14
COPB1-208ENST00000532088 A0A0U1RRA0 63 aa7.9□□□□□ -1.14
COPB1-208ENST00000532088 IFITM1P13164 125 aa7.9□□□□□ -1.14
COPB1-208ENST00000532088 RPL24P83731 157 aaKnown RBP7.9□□□□□ -1.14
COPB1-208ENST00000532088 CIRBP-AS1Q8TBR5 109 aa7.9□□□□□ -1.14
COPB1-208ENST00000532088 C14orf144Q96I85 54 aa7.9□□□□□ -1.14
COPB1-208ENST00000532088 A0A1W2PNN7 141 aa7.89□□□□□ -1.15
COPB1-208ENST00000532088 XGP55808 180 aa7.89□□□□□ -1.15
COPB1-208ENST00000532088 SCXQ7RTU7 201 aa7.89□□□□□ -1.15
COPB1-208ENST00000532088 DPH3Q96FX2 82 aa7.89□□□□□ -1.15
COPB1-208ENST00000532088 MIEN1Q9BRT3 115 aa7.89□□□□□ -1.15
COPB1-208ENST00000532088 TP73-AS1Q9UF72 201 aa7.89□□□□□ -1.15
COPB1-208ENST00000532088 NDUFC2O95298 119 aa7.88□□□□□ -1.15
COPB1-208ENST00000532088 DAND5Q8N907 189 aa7.88□□□□□ -1.15
COPB1-208ENST00000532088 LINC00308Q8TCZ7 52 aa7.88□□□□□ -1.15
COPB1-208ENST00000532088 UQCR10Q9UDW1 63 aa7.88□□□□□ -1.15
COPB1-208ENST00000532088 BIRC6Q9NR09 4857 aa7.87□□□□□ -1.15
COPB1-208ENST00000532088 VPREB1P12018 145 aa7.87□□□□□ -1.15
COPB1-208ENST00000532088 C12orf57Q99622 126 aa7.87□□□□□ -1.15
COPB1-208ENST00000532088 SERTAD4-AS1Q5TG53 156 aa7.86□□□□□ -1.15
COPB1-208ENST00000532088 SOSTDC1Q6X4U4 206 aa7.86□□□□□ -1.15
COPB1-208ENST00000532088 C2orf91Q6ZV80 131 aa7.86□□□□□ -1.15
COPB1-208ENST00000532088 KRTAP7-1Q8IUC3 87 aa7.86□□□□□ -1.15
COPB1-208ENST00000532088 LINC00518Q8N0U6 118 aa7.86□□□□□ -1.15
COPB1-208ENST00000532088 TRBV10-2A0A0K0K1G8 114 aa7.85□□□□□ -1.15
COPB1-208ENST00000532088 FAM168BA1KXE4 195 aa7.85□□□□□ -1.15
COPB1-208ENST00000532088 SRSF9Q13242 221 aaKnown RBP eCLIP7.85□□□□□ -1.15
COPB1-208ENST00000532088 TAL2Q16559 108 aa7.85□□□□□ -1.15
COPB1-208ENST00000532088 LBHQ53QV2 105 aaPredicted RBP7.85□□□□□ -1.15
COPB1-208ENST00000532088 FAM19A5Q7Z5A7 132 aaPredicted RBP7.85□□□□□ -1.15
COPB1-208ENST00000532088 C22orf24Q9Y442 160 aa7.85□□□□□ -1.15
COPB1-208ENST00000532088 M0QXV9 152 aa7.84□□□□□ -1.15
COPB1-208ENST00000532088 NKAPP1Q8N9T2 125 aa7.84□□□□□ -1.15
COPB1-208ENST00000532088 RYR1P21817 5038 aa7.84□□□□□ -1.15
COPB1-208ENST00000532088 M0R378 163 aa7.83□□□□□ -1.16
COPB1-208ENST00000532088 TRIAP1O43715 76 aa7.83□□□□□ -1.16
COPB1-208ENST00000532088 MRPL55Q7Z7F7 128 aaKnown RBP7.83□□□□□ -1.16
COPB1-208ENST00000532088 MUSTN1Q8IVN3 82 aa7.83□□□□□ -1.16
COPB1-208ENST00000532088 Q8NDZ9 215 aa7.83□□□□□ -1.16
COPB1-208ENST00000532088 C7orf33Q8WU49 177 aa7.82□□□□□ -1.16
COPB1-208ENST00000532088 HIST1H4GQ99525 98 aa7.82□□□□□ -1.16
COPB1-208ENST00000532088 KRTAP4-5Q9BYR2 181 aa7.82□□□□□ -1.16
COPB1-208ENST00000532088 HSPG2P98160 4391 aa7.81□□□□□ -1.16
COPB1-208ENST00000532088 TSTD3H0UI37 97 aa7.81□□□□□ -1.16
COPB1-208ENST00000532088 NPC2P61916 151 aa7.81□□□□□ -1.16
COPB1-208ENST00000532088 HAMPP81172 84 aa7.8□□□□□ -1.16
COPB1-208ENST00000532088 HSD52Q0P140 79 aa7.8□□□□□ -1.16
COPB1-208ENST00000532088 PHF5AQ7RTV0 110 aaKnown RBP7.8□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 67.1 ms