RNA–Protein interactions for RNA: ENST00000531341.1

CHKA-206, Transcript of choline kinase alpha, humanhuman

TSL 3

Gene CHKA, Length 524 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHKA-206ENST00000531341 LINC01546A6NGU7 62 aa11.74□□□□□ -0.53
CHKA-206ENST00000531341 IGLC3P0DOY3 106 aa11.72□□□□□ -0.53
CHKA-206ENST00000531341 COX17Q14061 63 aa11.72□□□□□ -0.53
CHKA-206ENST00000531341 SPINK1P00995 79 aa11.71□□□□□ -0.53
CHKA-206ENST00000531341 ZNF22P17026 224 aaPredicted RBP11.71□□□□□ -0.53
CHKA-206ENST00000531341 A0A1B0GVG6 124 aa11.7□□□□□ -0.54
CHKA-206ENST00000531341 KRTAP19-2Q3LHN2 52 aa11.7□□□□□ -0.54
CHKA-206ENST00000531341 SMCR5Q8TEV8 140 aa11.69□□□□□ -0.54
CHKA-206ENST00000531341 ZNF706Q9Y5V0 76 aaPredicted RBP11.69□□□□□ -0.54
CHKA-206ENST00000531341 LINC01549A6NIU2 74 aa11.68□□□□□ -0.54
CHKA-206ENST00000531341 Q8N377 158 aa11.67□□□□□ -0.54
CHKA-206ENST00000531341 NDUFA6P56556 154 aa11.66□□□□□ -0.54
CHKA-206ENST00000531341 XP32Q5T750 250 aa11.66□□□□□ -0.54
CHKA-206ENST00000531341 A0A0U1RRA0 63 aa11.65□□□□□ -0.54
CHKA-206ENST00000531341 MT1HP80294 61 aa11.64□□□□□ -0.55
CHKA-206ENST00000531341 A0A096LNJ9 63 aa11.63□□□□□ -0.55
CHKA-206ENST00000531341 SPRR1AP35321 89 aa11.63□□□□□ -0.55
CHKA-206ENST00000531341 LINC00158P58513 81 aa11.63□□□□□ -0.55
CHKA-206ENST00000531341 LINC00483Q53H64 154 aa11.63□□□□□ -0.55
CHKA-206ENST00000531341 KRTAP4-16G5E9R7 235 aaPredicted RBP11.62□□□□□ -0.55
CHKA-206ENST00000531341 FA2HQ7L5A8 372 aa11.62□□□□□ -0.55
CHKA-206ENST00000531341 PRYO14603 147 aa11.61□□□□□ -0.55
CHKA-206ENST00000531341 MOBPQ13875 183 aa11.61□□□□□ -0.55
CHKA-206ENST00000531341 IGLV9-49A0A0B4J1Y8 123 aa11.6□□□□□ -0.55
CHKA-206ENST00000531341 C11orf86A6NJI1 115 aa11.6□□□□□ -0.55
CHKA-206ENST00000531341 GAGE2AQ6NT46 116 aa11.6□□□□□ -0.55
CHKA-206ENST00000531341 NCR3O14931 201 aa11.59□□□□□ -0.55
CHKA-206ENST00000531341 KCNQ1DNQ9H478 68 aa11.59□□□□□ -0.55
CHKA-206ENST00000531341 SMCO4Q9NRQ5 59 aa11.59□□□□□ -0.55
CHKA-206ENST00000531341 NDUFA12Q9UI09 145 aa11.59□□□□□ -0.55
CHKA-206ENST00000531341 ERC2-IT1O76042 136 aa11.58□□□□□ -0.56
CHKA-206ENST00000531341 URB1-AS1Q96HZ7 61 aa11.58□□□□□ -0.56
CHKA-206ENST00000531341 RPS29P62273 56 aaKnown RBP11.57□□□□□ -0.56
CHKA-206ENST00000531341 TMEM170BQ5T4T1 132 aa11.57□□□□□ -0.56
CHKA-206ENST00000531341 ETDCA0A1B0GVM5 59 aa11.56□□□□□ -0.56
CHKA-206ENST00000531341 SLC25A20O43772 301 aa11.55□□□□□ -0.56
CHKA-206ENST00000531341 SMIM13P0DJ93 91 aa11.55□□□□□ -0.56
CHKA-206ENST00000531341 SFTA2Q6UW10 78 aa11.55□□□□□ -0.56
CHKA-206ENST00000531341 SSBP3-AS1Q7Z2R9 100 aa11.55□□□□□ -0.56
CHKA-206ENST00000531341 BOD1L2Q8IYS8 172 aa11.55□□□□□ -0.56
CHKA-206ENST00000531341 FAM19A2Q8N3H0 131 aa11.55□□□□□ -0.56
CHKA-206ENST00000531341 TRAV9-1A0A075B6T8 112 aa11.54□□□□□ -0.56
CHKA-206ENST00000531341 PMCHL1Q16048 86 aa11.54□□□□□ -0.56
CHKA-206ENST00000531341 TRBV10-3A0A0K0K1G6 114 aa11.53□□□□□ -0.56
CHKA-206ENST00000531341 BAGE3Q86Y29 109 aa11.53□□□□□ -0.56
CHKA-206ENST00000531341 B5MCH6 92 aa11.52□□□□□ -0.57
CHKA-206ENST00000531341 LORP23490 312 aaPredicted RBP11.52□□□□□ -0.57
CHKA-206ENST00000531341 FABP9Q0Z7S8 132 aa11.52□□□□□ -0.57
CHKA-206ENST00000531341 PCOTHQ58A44 107 aa11.5□□□□□ -0.57
CHKA-206ENST00000531341 MIR7-3HGQ8N6C7 128 aa11.5□□□□□ -0.57
CHKA-206ENST00000531341 Q9BRP9 147 aa11.5□□□□□ -0.57
CHKA-206ENST00000531341 KRTAP10-6P60371 365 aaPredicted RBP11.49□□□□□ -0.57
CHKA-206ENST00000531341 TMEM223A0PJW6 202 aa11.48□□□□□ -0.57
CHKA-206ENST00000531341 HBDP02042 147 aa11.48□□□□□ -0.57
CHKA-206ENST00000531341 CFC1BP0CG36 223 aa11.48□□□□□ -0.57
CHKA-206ENST00000531341 IGLV8-61A0A075B6I0 122 aa11.47□□□□□ -0.57
CHKA-206ENST00000531341 LINC00614P0C842 121 aa11.47□□□□□ -0.57
CHKA-206ENST00000531341 ATP6V1G1O75348 118 aa11.46□□□□□ -0.57
CHKA-206ENST00000531341 CHTOPQ9Y3Y2 248 aaKnown RBP11.46□□□□□ -0.57
CHKA-206ENST00000531341 FLGP20930 4061 aaPredicted RBP11.45□□□□□ -0.58
CHKA-206ENST00000531341 S100PP25815 95 aa11.45□□□□□ -0.58
CHKA-206ENST00000531341 MEIG1Q5JSS6 88 aa11.45□□□□□ -0.58
CHKA-206ENST00000531341 C18orf32Q8TCD1 76 aa11.45□□□□□ -0.58
CHKA-206ENST00000531341 TMEM218A2RU14 115 aa11.43□□□□□ -0.58
CHKA-206ENST00000531341 COX19Q49B96 90 aa11.42□□□□□ -0.58
CHKA-206ENST00000531341 C9orf153Q5TBE3 101 aa11.41□□□□□ -0.58
CHKA-206ENST00000531341 C9orf92A6NGG3 77 aa11.4□□□□□ -0.58
CHKA-206ENST00000531341 Q6ZRX8 168 aa11.4□□□□□ -0.58
CHKA-206ENST00000531341 DDTP30046 118 aa11.39□□□□□ -0.59
CHKA-206ENST00000531341 SEC11CQ9BY50 192 aa11.39□□□□□ -0.59
CHKA-206ENST00000531341 HERV-K104P63124 156 aa11.37□□□□□ -0.59
CHKA-206ENST00000531341 ST20-AS1Q8NBB2 130 aa11.37□□□□□ -0.59
CHKA-206ENST00000531341 S100A12P80511 92 aa11.36□□□□□ -0.59
CHKA-206ENST00000531341 CLLU1Q5K131 121 aa11.36□□□□□ -0.59
CHKA-206ENST00000531341 TRAPPC1Q9Y5R8 145 aa11.34□□□□□ -0.59
CHKA-206ENST00000531341 TRAV12-1A0A0B4J245 112 aa11.33□□□□□ -0.6
CHKA-206ENST00000531341 LOC107984156A0A0G2JMH3 177 aa11.33□□□□□ -0.6
CHKA-206ENST00000531341 HRCT1Q6UXD1 115 aa11.33□□□□□ -0.6
CHKA-206ENST00000531341 ARL17AQ8IVW1 177 aa11.33□□□□□ -0.6
CHKA-206ENST00000531341 TRBV10-2A0A0K0K1G8 114 aa11.32□□□□□ -0.6
CHKA-206ENST00000531341 TSPEAR-AS2P59090 65 aa11.32□□□□□ -0.6
CHKA-206ENST00000531341 UQCC3Q6UW78 93 aa11.32□□□□□ -0.6
CHKA-206ENST00000531341 LINC00587B1AMM8 73 aa11.31□□□□□ -0.6
CHKA-206ENST00000531341 MYMXA0A1B0GTQ4 84 aa11.3□□□□□ -0.6
CHKA-206ENST00000531341 M0R2T5 61 aa11.3□□□□□ -0.6
CHKA-206ENST00000531341 IGLV6-57P01721 117 aa11.3□□□□□ -0.6
CHKA-206ENST00000531341 IFI27L1Q96BM0 104 aa11.3□□□□□ -0.6
CHKA-206ENST00000531341 MAP1LC3CQ9BXW4 147 aa11.3□□□□□ -0.6
CHKA-206ENST00000531341 RPS10P5Q9NQ39 176 aa11.3□□□□□ -0.6
CHKA-206ENST00000531341 SPANXB1Q9NS25 103 aaPredicted RBP11.27□□□□□ -0.61
CHKA-206ENST00000531341 TRAV23DV6A0A075B6W5 121 aa11.26□□□□□ -0.61
CHKA-206ENST00000531341 JOSD1Q15040 202 aaPredicted RBP11.25□□□□□ -0.61
CHKA-206ENST00000531341 S100A7L2Q5SY68 101 aa11.25□□□□□ -0.61
CHKA-206ENST00000531341 LIMD2Q9BT23 127 aa11.25□□□□□ -0.61
CHKA-206ENST00000531341 EIF4EBP3O60516 100 aaPredicted RBP11.24□□□□□ -0.61
CHKA-206ENST00000531341 ZNF73O43830 326 aaPredicted RBP11.23□□□□□ -0.61
CHKA-206ENST00000531341 RHEBQ15382 184 aa11.22□□□□□ -0.61
CHKA-206ENST00000531341 C10orf91Q5T1B1 145 aa11.22□□□□□ -0.61
CHKA-206ENST00000531341 USH2AO75445 5202 aa11.22□□□□□ -0.61
CHKA-206ENST00000531341 SSPOA2VEC9 5147 aa11.21□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 50.8 ms