RNA–Protein interactions for RNA: ENST00000531014.5

CTNND1-229, Transcript of catenin delta 1, humanhuman

TSL 1 (best) BASIC

Gene CTNND1, Length 5,053 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNND1-229ENST00000531014 FLNBO75369 2602 aaKnown RBP5.1□□□□□ -1.59
CTNND1-229ENST00000531014 BRWD1-AS2P59051 145 aa5.09□□□□□ -1.59
CTNND1-229ENST00000531014 SPACA4Q8TDM5 124 aa5.09□□□□□ -1.59
CTNND1-229ENST00000531014 IGLV4-60A0A075B6I1 120 aa5.09□□□□□ -1.59
CTNND1-229ENST00000531014 ATG2AQ2TAZ0 1938 aa5.09□□□□□ -1.59
CTNND1-229ENST00000531014 CEP295Q9C0D2 2601 aa5.09□□□□□ -1.6
CTNND1-229ENST00000531014 LINC00313P59037 77 aa5.08□□□□□ -1.6
CTNND1-229ENST00000531014 PRR15Q8IV56 129 aa5.08□□□□□ -1.6
CTNND1-229ENST00000531014 ZNF580Q9UK33 172 aa5.08□□□□□ -1.6
CTNND1-229ENST00000531014 FAM229AH3BQW9 127 aa5.08□□□□□ -1.6
CTNND1-229ENST00000531014 Q8NBF4 154 aa5.08□□□□□ -1.6
CTNND1-229ENST00000531014 SONP18583 2426 aaKnown RBP5.08□□□□□ -1.6
CTNND1-229ENST00000531014 MOBPQ13875 183 aa5.07□□□□□ -1.6
CTNND1-229ENST00000531014 LOC110117498A0A087WWA1 95 aa5.07□□□□□ -1.6
CTNND1-229ENST00000531014 BAHCC1Q9P281 2608 aa5.07□□□□□ -1.6
CTNND1-229ENST00000531014 LYPD5Q6UWN5 251 aa5.07□□□□□ -1.6
CTNND1-229ENST00000531014 Q6ZQT0 140 aa5.07□□□□□ -1.6
CTNND1-229ENST00000531014 C22orf24Q9Y442 160 aa5.07□□□□□ -1.6
CTNND1-229ENST00000531014 NUP210LQ5VU65 1888 aa5.06□□□□□ -1.6
CTNND1-229ENST00000531014 A0A1B0GUV1 79 aa5.06□□□□□ -1.6
CTNND1-229ENST00000531014 CSPG4Q6UVK1 2322 aa5.06□□□□□ -1.6
CTNND1-229ENST00000531014 F8P00451 2351 aa5.06□□□□□ -1.6
CTNND1-229ENST00000531014 MYO9AB2RTY4 2548 aa5.06□□□□□ -1.6
CTNND1-229ENST00000531014 SMCPP49901 116 aaPredicted RBP5.06□□□□□ -1.6
CTNND1-229ENST00000531014 ARHGAP21Q5T5U3 1957 aa5.05□□□□□ -1.6
CTNND1-229ENST00000531014 A0A1W2PPR1 153 aa5.05□□□□□ -1.6
CTNND1-229ENST00000531014 C1orf134Q5TEV5 83 aa5.05□□□□□ -1.6
CTNND1-229ENST00000531014 TLN1Q9Y490 2541 aaKnown RBP5.05□□□□□ -1.6
CTNND1-229ENST00000531014 Q6ZRU5 148 aa5.05□□□□□ -1.6
CTNND1-229ENST00000531014 C1orf229Q6ZS94 237 aaPredicted RBP5.05□□□□□ -1.6
CTNND1-229ENST00000531014 ABCA12Q86UK0 2595 aa5.05□□□□□ -1.6
CTNND1-229ENST00000531014 ZNF106Q9H2Y7 1883 aaKnown RBP5.05□□□□□ -1.6
CTNND1-229ENST00000531014 HIVEP3Q5T1R4 2406 aa5.04□□□□□ -1.6
CTNND1-229ENST00000531014 MTORP42345 2549 aa5.04□□□□□ -1.6
CTNND1-229ENST00000531014 PRO0461Q9UI25 63 aa5.03□□□□□ -1.6
CTNND1-229ENST00000531014 TRBV7-4A0A0J9YYF1 115 aa5.03□□□□□ -1.6
CTNND1-229ENST00000531014 A8MWP4 228 aa5.03□□□□□ -1.6
CTNND1-229ENST00000531014 A0A096LNJ9 63 aa5.03□□□□□ -1.6
CTNND1-229ENST00000531014 LINC00476Q8WZB0 136 aa5.03□□□□□ -1.6
CTNND1-229ENST00000531014 MED12LQ86YW9 2145 aa5.03□□□□□ -1.6
CTNND1-229ENST00000531014 ZFYVE26Q68DK2 2539 aa5.02□□□□□ -1.61
CTNND1-229ENST00000531014 AVPP01185 164 aa5.02□□□□□ -1.61
CTNND1-229ENST00000531014 Q1T7F1 81 aa5.02□□□□□ -1.61
CTNND1-229ENST00000531014 C10orf99Q6UWK7 81 aa5.02□□□□□ -1.61
CTNND1-229ENST00000531014 MRPL34Q9BQ48 92 aaKnown RBP5.02□□□□□ -1.61
CTNND1-229ENST00000531014 KLKP1Q107X0 134 aa5.02□□□□□ -1.61
CTNND1-229ENST00000531014 J3QL48 77 aa5.01□□□□□ -1.61
CTNND1-229ENST00000531014 AGRNO00468 2067 aa5.01□□□□□ -1.61
CTNND1-229ENST00000531014 IGLV5-39A0A0G2JS06 123 aa5.01□□□□□ -1.61
CTNND1-229ENST00000531014 LINC00483Q53H64 154 aa5.01□□□□□ -1.61
CTNND1-229ENST00000531014 Q96NJ1 140 aa5□□□□□ -1.61
CTNND1-229ENST00000531014 C8orf17Q9NRJ1 99 aa5□□□□□ -1.61
CTNND1-229ENST00000531014 RBM12B-AS1Q9P1G2 102 aa5□□□□□ -1.61
CTNND1-229ENST00000531014 RPL37AP61513 92 aaKnown RBP5□□□□□ -1.61
CTNND1-229ENST00000531014 FHL3Q13643 280 aa5□□□□□ -1.61
CTNND1-229ENST00000531014 LINC00167Q96N53 147 aa5□□□□□ -1.61
CTNND1-229ENST00000531014 Q6ZPA2 131 aa5□□□□□ -1.61
CTNND1-229ENST00000531014 FAM218AQ96MZ4 157 aa4.99□□□□□ -1.61
CTNND1-229ENST00000531014 WIPF1O43516 503 aa4.99□□□□□ -1.61
CTNND1-229ENST00000531014 IGLV1-40P01703 118 aa4.99□□□□□ -1.61
CTNND1-229ENST00000531014 ODF3L2Q3SX64 289 aa4.99□□□□□ -1.61
CTNND1-229ENST00000531014 IGLV6-57P01721 117 aa4.98□□□□□ -1.61
CTNND1-229ENST00000531014 COX8CQ7Z4L0 72 aa4.97□□□□□ -1.61
CTNND1-229ENST00000531014 IGLV1-51P01701 117 aa4.97□□□□□ -1.61
CTNND1-229ENST00000531014 Q6ZRX8 168 aa4.97□□□□□ -1.61
CTNND1-229ENST00000531014 HELZ2Q9BYK8 2649 aaKnown RBP4.97□□□□□ -1.61
CTNND1-229ENST00000531014 K7EQZ3 153 aa4.97□□□□□ -1.61
CTNND1-229ENST00000531014 KIF25-AS1Q9Y6Z4 181 aa4.96□□□□□ -1.61
CTNND1-229ENST00000531014 JMJD1CQ15652 2540 aa4.96□□□□□ -1.61
CTNND1-229ENST00000531014 A0A0D9SG42 100 aa4.96□□□□□ -1.62
CTNND1-229ENST00000531014 C18orf65Q6ZTR6 163 aa4.96□□□□□ -1.62
CTNND1-229ENST00000531014 IGHV3OR16-9A0A0B4J2B5 98 aa4.95□□□□□ -1.62
CTNND1-229ENST00000531014 TYMSOSQ8TAI1 123 aa4.95□□□□□ -1.62
CTNND1-229ENST00000531014 HECTD1Q9ULT8 2610 aa4.95□□□□□ -1.62
CTNND1-229ENST00000531014 H7BZZ5 65 aa4.95□□□□□ -1.62
CTNND1-229ENST00000531014 COX6B2Q6YFQ2 88 aa4.95□□□□□ -1.62
CTNND1-229ENST00000531014 Q6ZSN1 163 aa4.95□□□□□ -1.62
CTNND1-229ENST00000531014 NCOA6Q14686 2063 aaPredicted RBP4.95□□□□□ -1.62
CTNND1-229ENST00000531014 ST20-AS1Q8NBB2 130 aa4.94□□□□□ -1.62
CTNND1-229ENST00000531014 FAM104AQ969W3 186 aa4.94□□□□□ -1.62
CTNND1-229ENST00000531014 PLA2G2DQ9UNK4 145 aa4.94□□□□□ -1.62
CTNND1-229ENST00000531014 IGLV5-48A0A075B6I7 105 aa4.93□□□□□ -1.62
CTNND1-229ENST00000531014 DMAC1Q96GE9 116 aa4.93□□□□□ -1.62
CTNND1-229ENST00000531014 C16orf90A8MZG2 172 aa4.93□□□□□ -1.62
CTNND1-229ENST00000531014 BRI3O95415 125 aa4.93□□□□□ -1.62
CTNND1-229ENST00000531014 KRTAP1-3Q8IUG1 177 aa4.93□□□□□ -1.62
CTNND1-229ENST00000531014 PIEZO2Q9H5I5 2752 aa4.93□□□□□ -1.62
CTNND1-229ENST00000531014 HCFC1P51610 2035 aa4.92□□□□□ -1.62
CTNND1-229ENST00000531014 TET2Q6N021 2002 aaPredicted RBP4.92□□□□□ -1.62
CTNND1-229ENST00000531014 TANC2Q9HCD6 1990 aa4.92□□□□□ -1.62
CTNND1-229ENST00000531014 CPAMD8Q8IZJ3 1885 aa4.92□□□□□ -1.62
CTNND1-229ENST00000531014 SPANXA2-OT1Q8N9U9 137 aa4.92□□□□□ -1.62
CTNND1-229ENST00000531014 LINC01546A6NGU7 62 aa4.91□□□□□ -1.62
CTNND1-229ENST00000531014 IGLV5-45A0A087WSX0 123 aa4.91□□□□□ -1.62
CTNND1-229ENST00000531014 CRIP3Q6Q6R5 217 aa4.91□□□□□ -1.62
CTNND1-229ENST00000531014 K7EIL1 84 aa4.9□□□□□ -1.62
CTNND1-229ENST00000531014 Q6ZRP5 223 aa4.9□□□□□ -1.62
CTNND1-229ENST00000531014 CAMK2N1Q7Z7J9 78 aa4.9□□□□□ -1.63
CTNND1-229ENST00000531014 ANKRD17O75179 2603 aaKnown RBP4.89□□□□□ -1.63
CTNND1-229ENST00000531014 A0A096LNT2 108 aa4.89□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 55.3 ms