RNA–Protein interactions for RNA: ENST00000530339.1

PCDHA4-203, Transcript of protocadherin alpha 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PCDHA4, Length 5,251 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA4-203ENST00000530339 hDV103S1A0JD37 113 aa10.71□□□□□ -0.69
PCDHA4-203ENST00000530339 CHD8Q9HCK8 2581 aa10.71□□□□□ -0.7
PCDHA4-203ENST00000530339 LIMD2Q9BT23 127 aa10.69□□□□□ -0.7
PCDHA4-203ENST00000530339 PCOTHQ58A44 107 aa10.67□□□□□ -0.7
PCDHA4-203ENST00000530339 C4orf26Q17RF5 130 aa10.67□□□□□ -0.7
PCDHA4-203ENST00000530339 DEFB116Q30KQ4 102 aa10.67□□□□□ -0.7
PCDHA4-203ENST00000530339 Q6ZQT0 140 aa10.67□□□□□ -0.7
PCDHA4-203ENST00000530339 SMIM29Q86T20 159 aa10.66□□□□□ -0.7
PCDHA4-203ENST00000530339 IGHV6-1A0A0B4J1U7 121 aa10.66□□□□□ -0.7
PCDHA4-203ENST00000530339 MUC4Q99102 2169 aa10.66□□□□□ -0.7
PCDHA4-203ENST00000530339 LOC110117498A0A087WWA1 95 aa10.65□□□□□ -0.7
PCDHA4-203ENST00000530339 KIAA0087Q14695 138 aa10.65□□□□□ -0.7
PCDHA4-203ENST00000530339 C22orf24Q9Y442 160 aa10.64□□□□□ -0.71
PCDHA4-203ENST00000530339 LRRK2Q5S007 2527 aa10.64□□□□□ -0.71
PCDHA4-203ENST00000530339 GOLGB1Q14789 3259 aaKnown RBP10.62□□□□□ -0.71
PCDHA4-203ENST00000530339 C6orf48Q9UBA6 75 aa10.62□□□□□ -0.71
PCDHA4-203ENST00000530339 MTORP42345 2549 aa10.62□□□□□ -0.71
PCDHA4-203ENST00000530339 ZNF462Q96JM2 2506 aa10.62□□□□□ -0.71
PCDHA4-203ENST00000530339 ELOF1P60002 83 aaKnown RBP10.61□□□□□ -0.71
PCDHA4-203ENST00000530339 SMCR5Q8TEV8 140 aa10.61□□□□□ -0.71
PCDHA4-203ENST00000530339 C1orf64Q8NEQ6 169 aa10.61□□□□□ -0.71
PCDHA4-203ENST00000530339 MDFIQ99750 246 aa10.6□□□□□ -0.71
PCDHA4-203ENST00000530339 X6R8D5 127 aa10.59□□□□□ -0.71
PCDHA4-203ENST00000530339 FAM229AH3BQW9 127 aa10.59□□□□□ -0.71
PCDHA4-203ENST00000530339 PRLHP81277 87 aa10.59□□□□□ -0.71
PCDHA4-203ENST00000530339 TP53AIP1Q9HCN2 124 aa10.58□□□□□ -0.72
PCDHA4-203ENST00000530339 GVQW2A0A096LPI5 108 aaPredicted RBP10.57□□□□□ -0.72
PCDHA4-203ENST00000530339 COL27A1Q8IZC6 1860 aaPredicted RBP10.57□□□□□ -0.72
PCDHA4-203ENST00000530339 H3BPC8 53 aa10.56□□□□□ -0.72
PCDHA4-203ENST00000530339 TM2D3Q9BRN9 247 aa10.56□□□□□ -0.72
PCDHA4-203ENST00000530339 SPTBN4Q9H254 2564 aa10.56□□□□□ -0.72
PCDHA4-203ENST00000530339 Q8NBF4 154 aa10.54□□□□□ -0.72
PCDHA4-203ENST00000530339 LINC00167Q96N53 147 aa10.54□□□□□ -0.72
PCDHA4-203ENST00000530339 WWC2-AS2Q96NR7 200 aa10.52□□□□□ -0.73
PCDHA4-203ENST00000530339 PCSK5Q92824 1860 aa10.52□□□□□ -0.73
PCDHA4-203ENST00000530339 KRTAP24-1Q3LI83 254 aa10.52□□□□□ -0.73
PCDHA4-203ENST00000530339 EIF4EBP3O60516 100 aaPredicted RBP10.51□□□□□ -0.73
PCDHA4-203ENST00000530339 Q6ZRX8 168 aa10.5□□□□□ -0.73
PCDHA4-203ENST00000530339 POLQO75417 2590 aa10.49□□□□□ -0.73
PCDHA4-203ENST00000530339 PRRC2CQ9Y520 2896 aaKnown RBP10.48□□□□□ -0.73
PCDHA4-203ENST00000530339 Q8NAQ8 132 aa10.48□□□□□ -0.73
PCDHA4-203ENST00000530339 IGLV6-57P01721 117 aa10.46□□□□□ -0.73
PCDHA4-203ENST00000530339 ERC2-IT1O76042 136 aa10.46□□□□□ -0.73
PCDHA4-203ENST00000530339 LINC00476Q8WZB0 136 aa10.45□□□□□ -0.74
PCDHA4-203ENST00000530339 C16orf90A8MZG2 172 aa10.44□□□□□ -0.74
PCDHA4-203ENST00000530339 RETNLBQ9BQ08 111 aa10.44□□□□□ -0.74
PCDHA4-203ENST00000530339 ANKRD17O75179 2603 aaKnown RBP10.42□□□□□ -0.74
PCDHA4-203ENST00000530339 NBDYA0A0U1RRE5 68 aa10.42□□□□□ -0.74
PCDHA4-203ENST00000530339 PLA2G1BP04054 148 aaKnown RBP10.41□□□□□ -0.74
PCDHA4-203ENST00000530339 SPINK1P00995 79 aa10.41□□□□□ -0.74
PCDHA4-203ENST00000530339 VPREB1P12018 145 aa10.41□□□□□ -0.74
PCDHA4-203ENST00000530339 KLKP1Q107X0 134 aa10.41□□□□□ -0.74
PCDHA4-203ENST00000530339 TRBV7-4A0A0J9YYF1 115 aa10.4□□□□□ -0.74
PCDHA4-203ENST00000530339 TRAV22A0A0B4J277 110 aa10.4□□□□□ -0.74
PCDHA4-203ENST00000530339 DNAH10OSP0CZ25 163 aa10.4□□□□□ -0.74
PCDHA4-203ENST00000530339 DNAH12Q6ZR08 3092 aa10.39□□□□□ -0.75
PCDHA4-203ENST00000530339 Q6ZRP5 223 aa10.39□□□□□ -0.75
PCDHA4-203ENST00000530339 FASNP49327 2511 aaKnown RBP10.39□□□□□ -0.75
PCDHA4-203ENST00000530339 ST20-AS1Q8NBB2 130 aa10.39□□□□□ -0.75
PCDHA4-203ENST00000530339 ACANP16112 2415 aa10.38□□□□□ -0.75
PCDHA4-203ENST00000530339 ACYP2P14621 99 aa10.38□□□□□ -0.75
PCDHA4-203ENST00000530339 SPAG11AQ6PDA7 123 aa10.37□□□□□ -0.75
PCDHA4-203ENST00000530339 A0A1B0GU69 56 aa10.37□□□□□ -0.75
PCDHA4-203ENST00000530339 CSNK1G2-AS1Q8NCQ2 148 aa10.37□□□□□ -0.75
PCDHA4-203ENST00000530339 RTL8CO15255 209 aa10.36□□□□□ -0.75
PCDHA4-203ENST00000530339 J3QL48 77 aa10.36□□□□□ -0.75
PCDHA4-203ENST00000530339 MOBPQ13875 183 aa10.35□□□□□ -0.75
PCDHA4-203ENST00000530339 SPACA4Q8TDM5 124 aa10.34□□□□□ -0.75
PCDHA4-203ENST00000530339 LINC00588Q9Y4M8 146 aa10.34□□□□□ -0.75
PCDHA4-203ENST00000530339 LINC00528Q8N1L1 170 aa10.33□□□□□ -0.76
PCDHA4-203ENST00000530339 EPM2AB3EWF7 344 aa10.33□□□□□ -0.76
PCDHA4-203ENST00000530339 KCNQ1DNQ9H478 68 aa10.33□□□□□ -0.76
PCDHA4-203ENST00000530339 IGKV2D-30A0A075B6S6 120 aa10.32□□□□□ -0.76
PCDHA4-203ENST00000530339 IGKV2-30P06310 120 aa10.32□□□□□ -0.76
PCDHA4-203ENST00000530339 K7EQZ3 153 aa10.32□□□□□ -0.76
PCDHA4-203ENST00000530339 H7BZZ5 65 aa10.31□□□□□ -0.76
PCDHA4-203ENST00000530339 LINC00612Q8N6U2 182 aa10.31□□□□□ -0.76
PCDHA4-203ENST00000530339 TYMSOSQ8TAI1 123 aa10.31□□□□□ -0.76
PCDHA4-203ENST00000530339 PRR34Q9NV39 138 aa10.31□□□□□ -0.76
PCDHA4-203ENST00000530339 RPL37AP61513 92 aaKnown RBP10.3□□□□□ -0.76
PCDHA4-203ENST00000530339 C8orf87E5RJ46 101 aa10.29□□□□□ -0.76
PCDHA4-203ENST00000530339 PHF5AQ7RTV0 110 aaKnown RBP10.29□□□□□ -0.76
PCDHA4-203ENST00000530339 LINC01600Q96MT4 127 aa10.29□□□□□ -0.76
PCDHA4-203ENST00000530339 A8MUN3 132 aa10.28□□□□□ -0.76
PCDHA4-203ENST00000530339 A0A096LNT2 108 aa10.27□□□□□ -0.76
PCDHA4-203ENST00000530339 C7orf65Q6ZTY9 151 aa10.27□□□□□ -0.76
PCDHA4-203ENST00000530339 IGLV1-50A0A075B6I6 118 aa10.27□□□□□ -0.76
PCDHA4-203ENST00000530339 CEP350Q5VT06 3117 aa10.27□□□□□ -0.77
PCDHA4-203ENST00000530339 LOC101927531A0A1B0GV80 90 aa10.27□□□□□ -0.77
PCDHA4-203ENST00000530339 A8MWP4 228 aa10.27□□□□□ -0.77
PCDHA4-203ENST00000530339 LINC00336Q6ZUF6 198 aa10.27□□□□□ -0.77
PCDHA4-203ENST00000530339 CYP4F30PQ9H0H9 118 aa10.26□□□□□ -0.77
PCDHA4-203ENST00000530339 C9orf129Q5T035 196 aaKnown RBP10.26□□□□□ -0.77
PCDHA4-203ENST00000530339 PLA2G2DQ9UNK4 145 aa10.26□□□□□ -0.77
PCDHA4-203ENST00000530339 LINC00313P59037 77 aa10.24□□□□□ -0.77
PCDHA4-203ENST00000530339 SERTAD4-AS1Q5TG53 156 aa10.24□□□□□ -0.77
PCDHA4-203ENST00000530339 ZNF575Q86XF7 245 aa10.24□□□□□ -0.77
PCDHA4-203ENST00000530339 TLX1NBP0CAT3 122 aa10.23□□□□□ -0.77
PCDHA4-203ENST00000530339 C19orf73Q9NVV2 129 aa10.22□□□□□ -0.77
PCDHA4-203ENST00000530339 FAM168BA1KXE4 195 aa10.21□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 59.2 ms