RNA–Protein interactions for RNA: ENST00000530036.1

RPUSD4-204, Transcript of RNA pseudouridylate synthase domain containing 4, humanhuman

TSL 3

Gene RPUSD4, Length 566 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPUSD4-204ENST00000530036 DLEU1O43261 78 aa3.57□□□□□ -1.84
RPUSD4-204ENST00000530036 HNRNPA3P51991 378 aaKnown RBP3.57□□□□□ -1.84
RPUSD4-204ENST00000530036 KRTAP10-4P60372 401 aaPredicted RBP3.57□□□□□ -1.84
RPUSD4-204ENST00000530036 GAGE2BQ13066 116 aa3.57□□□□□ -1.84
RPUSD4-204ENST00000530036 SRSF9Q13242 221 aaKnown RBP eCLIP3.57□□□□□ -1.84
RPUSD4-204ENST00000530036 LBHQ53QV2 105 aaPredicted RBP3.57□□□□□ -1.84
RPUSD4-204ENST00000530036 Q5VSD8 79 aa3.57□□□□□ -1.84
RPUSD4-204ENST00000530036 LINC00528Q8N1L1 170 aa3.57□□□□□ -1.84
RPUSD4-204ENST00000530036 ZNF625Q96I27 306 aaPredicted RBP3.57□□□□□ -1.84
RPUSD4-204ENST00000530036 TTTY13Q9BZ97 58 aa3.57□□□□□ -1.84
RPUSD4-204ENST00000530036 MYCBP2O75592 4640 aa3.56□□□□□ -1.84
RPUSD4-204ENST00000530036 M0R143 59 aa3.56□□□□□ -1.84
RPUSD4-204ENST00000530036 HERV-K104P63124 156 aa3.56□□□□□ -1.84
RPUSD4-204ENST00000530036 MEIG1Q5JSS6 88 aa3.56□□□□□ -1.84
RPUSD4-204ENST00000530036 SFTA2Q6UW10 78 aa3.56□□□□□ -1.84
RPUSD4-204ENST00000530036 HIST1H4GQ99525 98 aa3.56□□□□□ -1.84
RPUSD4-204ENST00000530036 SNHG12Q9BXW3 62 aa3.56□□□□□ -1.84
RPUSD4-204ENST00000530036 A0A0J9YXY3 114 aa3.55□□□□□ -1.84
RPUSD4-204ENST00000530036 A0A0U1RRA0 63 aa3.55□□□□□ -1.84
RPUSD4-204ENST00000530036 A0A1W2PNN7 141 aa3.55□□□□□ -1.84
RPUSD4-204ENST00000530036 FAM229AH3BQW9 127 aa3.55□□□□□ -1.84
RPUSD4-204ENST00000530036 LINC00158P58513 81 aa3.55□□□□□ -1.84
RPUSD4-204ENST00000530036 TSPEAR-AS2P59090 65 aa3.55□□□□□ -1.84
RPUSD4-204ENST00000530036 GAGE2EQ4V326 116 aa3.55□□□□□ -1.84
RPUSD4-204ENST00000530036 C9orf129Q5T035 196 aaKnown RBP3.55□□□□□ -1.84
RPUSD4-204ENST00000530036 KRTAP7-1Q8IUC3 87 aa3.55□□□□□ -1.84
RPUSD4-204ENST00000530036 HIGD1BQ9P298 99 aa3.55□□□□□ -1.84
RPUSD4-204ENST00000530036 GAGE2DQ9UEU5 116 aa3.55□□□□□ -1.84
RPUSD4-204ENST00000530036 FLG2Q5D862 2391 aaPredicted RBP3.54□□□□□ -1.84
RPUSD4-204ENST00000530036 FAM168BA1KXE4 195 aa3.54□□□□□ -1.84
RPUSD4-204ENST00000530036 TMEM238C9JI98 176 aa3.54□□□□□ -1.84
RPUSD4-204ENST00000530036 PFN2P35080 140 aa3.54□□□□□ -1.84
RPUSD4-204ENST00000530036 COX17Q14061 63 aa3.54□□□□□ -1.84
RPUSD4-204ENST00000530036 DPH3Q96FX2 82 aa3.54□□□□□ -1.84
RPUSD4-204ENST00000530036 ERG28Q9UKR5 140 aa3.54□□□□□ -1.84
RPUSD4-204ENST00000530036 PLA2G1BP04054 148 aaKnown RBP3.53□□□□□ -1.84
RPUSD4-204ENST00000530036 SMIM13P0DJ93 91 aa3.53□□□□□ -1.84
RPUSD4-204ENST00000530036 RPL37AP61513 92 aaKnown RBP3.53□□□□□ -1.84
RPUSD4-204ENST00000530036 BATFQ16520 125 aa3.53□□□□□ -1.84
RPUSD4-204ENST00000530036 TAL2Q16559 108 aa3.53□□□□□ -1.84
RPUSD4-204ENST00000530036 Q6ZVH6 145 aa3.53□□□□□ -1.84
RPUSD4-204ENST00000530036 C7orf33Q8WU49 177 aa3.53□□□□□ -1.84
RPUSD4-204ENST00000530036 COPS9Q8WXC6 57 aa3.53□□□□□ -1.84
RPUSD4-204ENST00000530036 XAGE1AQ9HD64 81 aa3.53□□□□□ -1.84
RPUSD4-204ENST00000530036 TP73-AS1Q9UF72 201 aa3.53□□□□□ -1.84
RPUSD4-204ENST00000530036 PLA2G2DQ9UNK4 145 aa3.53□□□□□ -1.84
RPUSD4-204ENST00000530036 FAT3Q8TDW7 4589 aa3.53□□□□□ -1.84
RPUSD4-204ENST00000530036 LRP1Q07954 4544 aaKnown RBP3.52□□□□□ -1.85
RPUSD4-204ENST00000530036 IGLV5-37A0A075B6J1 123 aa3.52□□□□□ -1.85
RPUSD4-204ENST00000530036 A0A1B0GV90 55 aa3.52□□□□□ -1.85
RPUSD4-204ENST00000530036 M0QXV9 152 aa3.52□□□□□ -1.85
RPUSD4-204ENST00000530036 TIMM17BO60830 172 aa3.52□□□□□ -1.85
RPUSD4-204ENST00000530036 HINT1P49773 126 aaPredicted RBP3.52□□□□□ -1.85
RPUSD4-204ENST00000530036 NPC2P61916 151 aa3.52□□□□□ -1.85
RPUSD4-204ENST00000530036 PRR3P79522 188 aaKnown RBP3.52□□□□□ -1.85
RPUSD4-204ENST00000530036 HSD52Q0P140 79 aa3.52□□□□□ -1.85
RPUSD4-204ENST00000530036 COL5A1-AS1Q5SY13 56 aa3.52□□□□□ -1.85
RPUSD4-204ENST00000530036 LCE2DQ5TA82 110 aaPredicted RBP3.52□□□□□ -1.85
RPUSD4-204ENST00000530036 SERTAD4-AS1Q5TG53 156 aa3.52□□□□□ -1.85
RPUSD4-204ENST00000530036 C2orf91Q6ZV80 131 aa3.52□□□□□ -1.85
RPUSD4-204ENST00000530036 PHF5AQ7RTV0 110 aaKnown RBP3.52□□□□□ -1.85
RPUSD4-204ENST00000530036 FAM19A5Q7Z5A7 132 aaPredicted RBP3.52□□□□□ -1.85
RPUSD4-204ENST00000530036 MUSTN1Q8IVN3 82 aa3.52□□□□□ -1.85
RPUSD4-204ENST00000530036 SND1-IT1Q9HBX3 110 aa3.52□□□□□ -1.85
RPUSD4-204ENST00000530036 TMEM238LA0A1B0GVL6 79 aa3.51□□□□□ -1.85
RPUSD4-204ENST00000530036 A6NJY4 79 aa3.51□□□□□ -1.85
RPUSD4-204ENST00000530036 IFITM1P13164 125 aa3.51□□□□□ -1.85
RPUSD4-204ENST00000530036 RPL24P83731 157 aaKnown RBP3.51□□□□□ -1.85
RPUSD4-204ENST00000530036 ADAMTSL4-AS1Q5T5F5 129 aa3.51□□□□□ -1.85
RPUSD4-204ENST00000530036 CEND1Q8N111 149 aa3.51□□□□□ -1.85
RPUSD4-204ENST00000530036 DAND5Q8N907 189 aa3.51□□□□□ -1.85
RPUSD4-204ENST00000530036 SPANXB1Q9NS25 103 aaPredicted RBP3.51□□□□□ -1.85
RPUSD4-204ENST00000530036 A6NDN8 102 aa3.5□□□□□ -1.85
RPUSD4-204ENST00000530036 INAFM2P0DMQ5 153 aa3.5□□□□□ -1.85
RPUSD4-204ENST00000530036 VPREB1P12018 145 aa3.5□□□□□ -1.85
RPUSD4-204ENST00000530036 BVES-AS1Q5T3Y7 98 aa3.5□□□□□ -1.85
RPUSD4-204ENST00000530036 KRTAP11-1Q8IUC1 163 aa3.5□□□□□ -1.85
RPUSD4-204ENST00000530036 MIR7-3HGQ8N6C7 128 aa3.5□□□□□ -1.85
RPUSD4-204ENST00000530036 Q8NDZ9 215 aa3.5□□□□□ -1.85
RPUSD4-204ENST00000530036 LINC00308Q8TCZ7 52 aa3.5□□□□□ -1.85
RPUSD4-204ENST00000530036 SPANXDQ9BXN6 97 aa3.5□□□□□ -1.85
RPUSD4-204ENST00000530036 SPANXCQ9NY87 97 aa3.5□□□□□ -1.85
RPUSD4-204ENST00000530036 PSORS1C2Q9UIG4 136 aa3.5□□□□□ -1.85
RPUSD4-204ENST00000530036 C22orf24Q9Y442 160 aa3.5□□□□□ -1.85
RPUSD4-204ENST00000530036 DMBT1Q9UGM3 2413 aaPredicted RBP3.5□□□□□ -1.85
RPUSD4-204ENST00000530036 LOC107984156A0A0G2JMH3 177 aa3.49□□□□□ -1.85
RPUSD4-204ENST00000530036 MRPL55Q7Z7F7 128 aaKnown RBP3.49□□□□□ -1.85
RPUSD4-204ENST00000530036 ARL17AQ8IVW1 177 aa3.49□□□□□ -1.85
RPUSD4-204ENST00000530036 RAB37Q96AX2 223 aa3.49□□□□□ -1.85
RPUSD4-204ENST00000530036 LITAFQ99732 161 aa3.49□□□□□ -1.85
RPUSD4-204ENST00000530036 KRTAP9-6A0A140TA67 174 aa3.48□□□□□ -1.85
RPUSD4-204ENST00000530036 A4D1N5 150 aa3.48□□□□□ -1.85
RPUSD4-204ENST00000530036 NKAPP1Q8N9T2 125 aa3.48□□□□□ -1.85
RPUSD4-204ENST00000530036 LINC00167Q96N53 147 aa3.48□□□□□ -1.85
RPUSD4-204ENST00000530036 NHP2Q9NX24 153 aaKnown RBP3.48□□□□□ -1.85
RPUSD4-204ENST00000530036 FXYD2P54710 66 aa3.47□□□□□ -1.85
RPUSD4-204ENST00000530036 UBE2BP63146 152 aa3.47□□□□□ -1.85
RPUSD4-204ENST00000530036 C1orf137Q5JT78 98 aa3.47□□□□□ -1.85
RPUSD4-204ENST00000530036 SOSTDC1Q6X4U4 206 aa3.47□□□□□ -1.85
RPUSD4-204ENST00000530036 OR13C6PQ8NH95 151 aa3.47□□□□□ -1.85
Retrieved 100 of 20,778 RNA–protein pairs in 78 ms