RNA–Protein interactions for RNA: ENST00000528739.5

CAPN1-216, Transcript of calpain 1, humanhuman

TSL 5

Gene CAPN1, Length 341 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-216ENST00000528739 LINC00310P59036 64 aa8.61□□□□□ -1.03
CAPN1-216ENST00000528739 PMCHL2Q9BQD1 86 aa8.61□□□□□ -1.03
CAPN1-216ENST00000528739 HMCN2Q8NDA2 5059 aa8.6□□□□□ -1.03
CAPN1-216ENST00000528739 IGLV1-50A0A075B6I6 118 aa8.6□□□□□ -1.03
CAPN1-216ENST00000528739 MYMXA0A1B0GTQ4 84 aa8.6□□□□□ -1.03
CAPN1-216ENST00000528739 VPREB1P12018 145 aa8.6□□□□□ -1.03
CAPN1-216ENST00000528739 MAP1LC3CQ9BXW4 147 aa8.6□□□□□ -1.03
CAPN1-216ENST00000528739 NDUFA12Q9UI09 145 aa8.6□□□□□ -1.03
CAPN1-216ENST00000528739 DPM2O94777 84 aa8.59□□□□□ -1.03
CAPN1-216ENST00000528739 PLNP26678 52 aa8.59□□□□□ -1.03
CAPN1-216ENST00000528739 HERVK_113P61574 105 aa8.59□□□□□ -1.03
CAPN1-216ENST00000528739 HERV-K104P63124 156 aa8.59□□□□□ -1.03
CAPN1-216ENST00000528739 LINC00587B1AMM8 73 aa8.58□□□□□ -1.04
CAPN1-216ENST00000528739 FAM19A1Q7Z5A9 133 aa8.58□□□□□ -1.04
CAPN1-216ENST00000528739 LEPROTO15243 131 aa8.57□□□□□ -1.04
CAPN1-216ENST00000528739 IGKCP01834 107 aa8.57□□□□□ -1.04
CAPN1-216ENST00000528739 KRTAP1-4P0C5Y4 121 aa8.57□□□□□ -1.04
CAPN1-216ENST00000528739 RPL13AP40429 203 aaKnown RBP8.57□□□□□ -1.04
CAPN1-216ENST00000528739 MIR7-3HGQ8N6C7 128 aa8.57□□□□□ -1.04
CAPN1-216ENST00000528739 PLEKHB2Q96CS7 222 aa8.57□□□□□ -1.04
CAPN1-216ENST00000528739 TMEM238C9JI98 176 aa8.56□□□□□ -1.04
CAPN1-216ENST00000528739 LGALS3P17931 250 aaKnown RBP8.56□□□□□ -1.04
CAPN1-216ENST00000528739 BOD1L2Q8IYS8 172 aa8.56□□□□□ -1.04
CAPN1-216ENST00000528739 PRLHP81277 87 aa8.55□□□□□ -1.04
CAPN1-216ENST00000528739 Q8NDZ9 215 aa8.55□□□□□ -1.04
CAPN1-216ENST00000528739 TMEM126AQ9H061 195 aa8.55□□□□□ -1.04
CAPN1-216ENST00000528739 J3QQQ9 107 aa8.54□□□□□ -1.04
CAPN1-216ENST00000528739 M0R378 163 aa8.54□□□□□ -1.04
CAPN1-216ENST00000528739 NCR3O14931 201 aa8.54□□□□□ -1.04
CAPN1-216ENST00000528739 HIST1H2BKO60814 126 aa8.53□□□□□ -1.04
CAPN1-216ENST00000528739 HIST1H2BJP06899 126 aa8.53□□□□□ -1.04
CAPN1-216ENST00000528739 HIST1H2BOP23527 126 aa8.53□□□□□ -1.04
CAPN1-216ENST00000528739 HIST1H2BBP33778 126 aa8.53□□□□□ -1.04
CAPN1-216ENST00000528739 HIST1H2BDP58876 126 aa8.53□□□□□ -1.04
CAPN1-216ENST00000528739 TSPEAR-AS2P59090 65 aa8.53□□□□□ -1.04
CAPN1-216ENST00000528739 HIST1H2BCP62807 126 aa8.53□□□□□ -1.04
CAPN1-216ENST00000528739 HIST2H2BEQ16778 126 aa8.53□□□□□ -1.04
CAPN1-216ENST00000528739 HIST2H2BFQ5QNW6 126 aaPredicted RBP8.53□□□□□ -1.04
CAPN1-216ENST00000528739 HIST1H2BHQ93079 126 aa8.53□□□□□ -1.04
CAPN1-216ENST00000528739 HIST1H2BNQ99877 126 aa8.53□□□□□ -1.04
CAPN1-216ENST00000528739 HIST1H2BMQ99879 126 aa8.53□□□□□ -1.04
CAPN1-216ENST00000528739 CRYGAP11844 174 aa8.52□□□□□ -1.05
CAPN1-216ENST00000528739 DAND5Q8N907 189 aa8.52□□□□□ -1.05
CAPN1-216ENST00000528739 ANAPC11Q9NYG5 84 aa8.52□□□□□ -1.05
CAPN1-216ENST00000528739 TYMSOSQ8TAI1 123 aa8.51□□□□□ -1.05
CAPN1-216ENST00000528739 MIEN1Q9BRT3 115 aa8.51□□□□□ -1.05
CAPN1-216ENST00000528739 NMUP48645 174 aa8.5□□□□□ -1.05
CAPN1-216ENST00000528739 S100A12P80511 92 aa8.5□□□□□ -1.05
CAPN1-216ENST00000528739 HIGD2AQ9BW72 106 aa8.5□□□□□ -1.05
CAPN1-216ENST00000528739 SYS1-DBNDD2H3BUS1 97 aa8.49□□□□□ -1.05
CAPN1-216ENST00000528739 TSPAN13O95857 204 aa8.49□□□□□ -1.05
CAPN1-216ENST00000528739 KRTAP13-1Q8IUC0 172 aa8.49□□□□□ -1.05
CAPN1-216ENST00000528739 A0A087X002 238 aa8.48□□□□□ -1.05
CAPN1-216ENST00000528739 IGKV2D-26A0A0A0MRZ7 120 aa8.47□□□□□ -1.05
CAPN1-216ENST00000528739 NPC2P61916 151 aa8.47□□□□□ -1.05
CAPN1-216ENST00000528739 ETDCA0A1B0GVM5 59 aa8.46□□□□□ -1.06
CAPN1-216ENST00000528739 PRYO14603 147 aa8.46□□□□□ -1.06
CAPN1-216ENST00000528739 KRTDAPP60985 99 aa8.46□□□□□ -1.06
CAPN1-216ENST00000528739 PRR4Q16378 134 aa8.46□□□□□ -1.06
CAPN1-216ENST00000528739 PET117Q6UWS5 81 aa8.46□□□□□ -1.06
CAPN1-216ENST00000528739 TRBV10-3A0A0K0K1G6 114 aa8.45□□□□□ -1.06
CAPN1-216ENST00000528739 E9PLD3 99 aa8.45□□□□□ -1.06
CAPN1-216ENST00000528739 UBR4Q5T4S7 5183 aa8.44□□□□□ -1.06
CAPN1-216ENST00000528739 S100A7L2Q5SY68 101 aa8.44□□□□□ -1.06
CAPN1-216ENST00000528739 A0A0J9YXY3 114 aa8.43□□□□□ -1.06
CAPN1-216ENST00000528739 DDTP30046 118 aa8.43□□□□□ -1.06
CAPN1-216ENST00000528739 C3orf79P0CE67 100 aa8.42□□□□□ -1.06
CAPN1-216ENST00000528739 FAM229BQ4G0N7 80 aa8.42□□□□□ -1.06
CAPN1-216ENST00000528739 LINC01545Q5VT33 79 aa8.42□□□□□ -1.06
CAPN1-216ENST00000528739 KCNQ1DNQ9H478 68 aa8.42□□□□□ -1.06
CAPN1-216ENST00000528739 C20orf202A1L168 122 aa8.41□□□□□ -1.06
CAPN1-216ENST00000528739 KRTAP13-2Q52LG2 175 aa8.41□□□□□ -1.06
CAPN1-216ENST00000528739 LINC00337Q8N6G1 96 aa8.41□□□□□ -1.06
CAPN1-216ENST00000528739 SPANXB1Q9NS25 103 aaPredicted RBP8.41□□□□□ -1.06
CAPN1-216ENST00000528739 ZNF706Q9Y5V0 76 aaPredicted RBP8.41□□□□□ -1.06
CAPN1-216ENST00000528739 LOC107984156A0A0G2JMH3 177 aa8.4□□□□□ -1.06
CAPN1-216ENST00000528739 TRBV10-2A0A0K0K1G8 114 aa8.4□□□□□ -1.06
CAPN1-216ENST00000528739 ZNF815PA8K554 130 aa8.4□□□□□ -1.06
CAPN1-216ENST00000528739 ADAMTSL4-AS1Q5T5F5 129 aa8.4□□□□□ -1.06
CAPN1-216ENST00000528739 ARL17AQ8IVW1 177 aa8.4□□□□□ -1.06
CAPN1-216ENST00000528739 SMCR5Q8TEV8 140 aa8.4□□□□□ -1.06
CAPN1-216ENST00000528739 LINC00304Q8N9R0 145 aa8.39□□□□□ -1.07
CAPN1-216ENST00000528739 PPDPFQ9H3Y8 114 aa8.39□□□□□ -1.07
CAPN1-216ENST00000528739 NDUFC2O95298 119 aa8.38□□□□□ -1.07
CAPN1-216ENST00000528739 COA6Q5JTJ3 125 aaKnown RBP8.38□□□□□ -1.07
CAPN1-216ENST00000528739 SPRR4Q96PI1 79 aa8.38□□□□□ -1.07
CAPN1-216ENST00000528739 SPRR1AP35321 89 aa8.37□□□□□ -1.07
CAPN1-216ENST00000528739 SOSTDC1Q6X4U4 206 aa8.37□□□□□ -1.07
CAPN1-216ENST00000528739 C3orf22Q8N5N4 141 aa8.37□□□□□ -1.07
CAPN1-216ENST00000528739 OR13C6PQ8NH95 151 aa8.37□□□□□ -1.07
CAPN1-216ENST00000528739 TTTY13Q9BZ97 58 aa8.37□□□□□ -1.07
CAPN1-216ENST00000528739 LRP2P98164 4655 aa8.37□□□□□ -1.07
CAPN1-216ENST00000528739 ATOH7Q8N100 152 aa8.36□□□□□ -1.07
CAPN1-216ENST00000528739 TRAV23DV6A0A075B6W5 121 aa8.35□□□□□ -1.07
CAPN1-216ENST00000528739 B5MCH6 92 aa8.35□□□□□ -1.07
CAPN1-216ENST00000528739 S100A1P23297 94 aa8.35□□□□□ -1.07
CAPN1-216ENST00000528739 GAGE2AQ6NT46 116 aa8.35□□□□□ -1.07
CAPN1-216ENST00000528739 SCGB1D4Q6XE38 83 aa8.35□□□□□ -1.07
CAPN1-216ENST00000528739 LINC00308Q8TCZ7 52 aa8.35□□□□□ -1.07
CAPN1-216ENST00000528739 EIF4EBP3O60516 100 aaPredicted RBP8.34□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 11.9 ms