RNA–Protein interactions for RNA: ENST00000527900.1

CHD7-206, Transcript of chromodomain helicase DNA binding protein 7, humanhuman

TSL 3

Gene CHD7, Length 398 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD7-206ENST00000527900 TYMSOSQ8TAI1 123 aa4.96□□□□□ -1.62
CHD7-206ENST00000527900 SND1-IT1Q9HBX3 110 aa4.96□□□□□ -1.62
CHD7-206ENST00000527900 SMCO4Q9NRQ5 59 aa4.96□□□□□ -1.62
CHD7-206ENST00000527900 C11orf86A6NJI1 115 aa4.95□□□□□ -1.62
CHD7-206ENST00000527900 PFN2P35080 140 aa4.95□□□□□ -1.62
CHD7-206ENST00000527900 NKAPP1Q8N9T2 125 aa4.95□□□□□ -1.62
CHD7-206ENST00000527900 ZNF625Q96I27 306 aaPredicted RBP4.95□□□□□ -1.62
CHD7-206ENST00000527900 RPS10P5Q9NQ39 176 aa4.95□□□□□ -1.62
CHD7-206ENST00000527900 ERG28Q9UKR5 140 aa4.95□□□□□ -1.62
CHD7-206ENST00000527900 IGKV2-28A0A075B6P5 120 aa4.94□□□□□ -1.62
CHD7-206ENST00000527900 M0R378 163 aa4.94□□□□□ -1.62
CHD7-206ENST00000527900 IGKV2D-28P01615 120 aa4.94□□□□□ -1.62
CHD7-206ENST00000527900 HBDP02042 147 aa4.94□□□□□ -1.62
CHD7-206ENST00000527900 UBE2AP49459 152 aa4.94□□□□□ -1.62
CHD7-206ENST00000527900 PMCHL1Q16048 86 aa4.94□□□□□ -1.62
CHD7-206ENST00000527900 TMEM126AQ9H061 195 aa4.94□□□□□ -1.62
CHD7-206ENST00000527900 TRAPPC1Q9Y5R8 145 aa4.94□□□□□ -1.62
CHD7-206ENST00000527900 MUC17Q685J3 4493 aa4.93□□□□□ -1.62
CHD7-206ENST00000527900 TMEM238C9JI98 176 aa4.93□□□□□ -1.62
CHD7-206ENST00000527900 NDUFA6P56556 154 aa4.93□□□□□ -1.62
CHD7-206ENST00000527900 CTAG1AP78358 180 aa4.93□□□□□ -1.62
CHD7-206ENST00000527900 BAGE3Q86Y29 109 aa4.93□□□□□ -1.62
CHD7-206ENST00000527900 PLEKHB2Q96CS7 222 aa4.93□□□□□ -1.62
CHD7-206ENST00000527900 YPEL4Q96NS1 127 aa4.93□□□□□ -1.62
CHD7-206ENST00000527900 PRLHP81277 87 aa4.92□□□□□ -1.62
CHD7-206ENST00000527900 RPL24P83731 157 aaKnown RBP4.92□□□□□ -1.62
CHD7-206ENST00000527900 SFTA2Q6UW10 78 aa4.92□□□□□ -1.62
CHD7-206ENST00000527900 TMEM223A0PJW6 202 aa4.91□□□□□ -1.62
CHD7-206ENST00000527900 FAM19A1Q7Z5A9 133 aa4.91□□□□□ -1.62
CHD7-206ENST00000527900 TRAV12-1A0A0B4J245 112 aa4.9□□□□□ -1.63
CHD7-206ENST00000527900 TMEM170BQ5T4T1 132 aa4.9□□□□□ -1.63
CHD7-206ENST00000527900 LINC00304Q8N9R0 145 aa4.9□□□□□ -1.63
CHD7-206ENST00000527900 KRTAP4-2Q9BYR5 136 aa4.9□□□□□ -1.63
CHD7-206ENST00000527900 CHTOPQ9Y3Y2 248 aaKnown RBP4.9□□□□□ -1.63
CHD7-206ENST00000527900 FAT4Q6V0I7 4981 aa4.9□□□□□ -1.63
CHD7-206ENST00000527900 C3orf22Q8N5N4 141 aa4.89□□□□□ -1.63
CHD7-206ENST00000527900 CHCHD1Q96BP2 118 aaKnown RBP4.89□□□□□ -1.63
CHD7-206ENST00000527900 RETNLBQ9BQ08 111 aa4.89□□□□□ -1.63
CHD7-206ENST00000527900 IGKV2D-26A0A0A0MRZ7 120 aa4.88□□□□□ -1.63
CHD7-206ENST00000527900 KRTAP4-16G5E9R7 235 aaPredicted RBP4.88□□□□□ -1.63
CHD7-206ENST00000527900 SNAPINO95295 136 aa4.88□□□□□ -1.63
CHD7-206ENST00000527900 APOC3P02656 99 aa4.88□□□□□ -1.63
CHD7-206ENST00000527900 SPRR1AP35321 89 aa4.88□□□□□ -1.63
CHD7-206ENST00000527900 LINC00158P58513 81 aa4.88□□□□□ -1.63
CHD7-206ENST00000527900 TPRXLQ17RH7 258 aa4.88□□□□□ -1.63
CHD7-206ENST00000527900 CBLN2Q8IUK8 224 aa4.88□□□□□ -1.63
CHD7-206ENST00000527900 IFI27L1Q96BM0 104 aa4.88□□□□□ -1.63
CHD7-206ENST00000527900 SVBPQ8N300 66 aa4.87□□□□□ -1.63
CHD7-206ENST00000527900 SPRR4Q96PI1 79 aa4.87□□□□□ -1.63
CHD7-206ENST00000527900 KCNQ1DNQ9H478 68 aa4.87□□□□□ -1.63
CHD7-206ENST00000527900 LOC107984156A0A0G2JMH3 177 aa4.86□□□□□ -1.63
CHD7-206ENST00000527900 SMIM13P0DJ93 91 aa4.86□□□□□ -1.63
CHD7-206ENST00000527900 ARL17AQ8IVW1 177 aa4.86□□□□□ -1.63
CHD7-206ENST00000527900 LINC00337Q8N6G1 96 aa4.86□□□□□ -1.63
CHD7-206ENST00000527900 HIGD2AQ9BW72 106 aa4.86□□□□□ -1.63
CHD7-206ENST00000527900 IGLV7-46A0A075B6I9 117 aa4.85□□□□□ -1.63
CHD7-206ENST00000527900 A0A0U1RRA0 63 aa4.85□□□□□ -1.63
CHD7-206ENST00000527900 PRYO14603 147 aa4.85□□□□□ -1.63
CHD7-206ENST00000527900 HERV-K104P63124 156 aa4.85□□□□□ -1.63
CHD7-206ENST00000527900 SPAG11AQ6PDA7 123 aa4.85□□□□□ -1.63
CHD7-206ENST00000527900 MIR7-3HGQ8N6C7 128 aa4.85□□□□□ -1.63
CHD7-206ENST00000527900 A0A0U1RQV1 116 aa4.84□□□□□ -1.63
CHD7-206ENST00000527900 LINC00310P59036 64 aa4.84□□□□□ -1.63
CHD7-206ENST00000527900 NDUFA5Q16718 116 aa4.84□□□□□ -1.63
CHD7-206ENST00000527900 BOD1L2Q8IYS8 172 aa4.84□□□□□ -1.63
CHD7-206ENST00000527900 FAM19A2Q8N3H0 131 aa4.84□□□□□ -1.63
CHD7-206ENST00000527900 SMCR5Q8TEV8 140 aa4.84□□□□□ -1.63
CHD7-206ENST00000527900 TSPEAR-AS2P59090 65 aa4.83□□□□□ -1.64
CHD7-206ENST00000527900 LINC00483Q53H64 154 aa4.83□□□□□ -1.64
CHD7-206ENST00000527900 PPDPFQ9H3Y8 114 aa4.83□□□□□ -1.64
CHD7-206ENST00000527900 NDUFA12Q9UI09 145 aa4.83□□□□□ -1.64
CHD7-206ENST00000527900 TRBV10-3A0A0K0K1G6 114 aa4.82□□□□□ -1.64
CHD7-206ENST00000527900 MYMXA0A1B0GTQ4 84 aa4.82□□□□□ -1.64
CHD7-206ENST00000527900 LINC00587B1AMM8 73 aa4.82□□□□□ -1.64
CHD7-206ENST00000527900 NCR3O14931 201 aa4.82□□□□□ -1.64
CHD7-206ENST00000527900 MEIG1Q5JSS6 88 aa4.82□□□□□ -1.64
CHD7-206ENST00000527900 CDIP1Q9H305 208 aa4.82□□□□□ -1.64
CHD7-206ENST00000527900 ZNF706Q9Y5V0 76 aaPredicted RBP4.82□□□□□ -1.64
CHD7-206ENST00000527900 B5MCH6 92 aa4.81□□□□□ -1.64
CHD7-206ENST00000527900 LEPROTO15243 131 aa4.81□□□□□ -1.64
CHD7-206ENST00000527900 ATP6V1G1O75348 118 aa4.81□□□□□ -1.64
CHD7-206ENST00000527900 HSBP1O75506 76 aa4.81□□□□□ -1.64
CHD7-206ENST00000527900 TRGC2P03986 189 aa4.81□□□□□ -1.64
CHD7-206ENST00000527900 FP248Q71RG6 208 aaPredicted RBP4.81□□□□□ -1.64
CHD7-206ENST00000527900 Q8NBF4 154 aa4.81□□□□□ -1.64
CHD7-206ENST00000527900 TRBV10-2A0A0K0K1G8 114 aa4.8□□□□□ -1.64
CHD7-206ENST00000527900 ERC2-IT1O76042 136 aa4.8□□□□□ -1.64
CHD7-206ENST00000527900 KRTAP13-3Q3SY46 172 aa4.8□□□□□ -1.64
CHD7-206ENST00000527900 DAND5Q8N907 189 aa4.8□□□□□ -1.64
CHD7-206ENST00000527900 Q9BRP9 147 aa4.8□□□□□ -1.64
CHD7-206ENST00000527900 ETDCA0A1B0GVM5 59 aa4.79□□□□□ -1.64
CHD7-206ENST00000527900 SERF1AO75920 110 aa4.79□□□□□ -1.64
CHD7-206ENST00000527900 LEPROTL1O95214 131 aa4.79□□□□□ -1.64
CHD7-206ENST00000527900 SPINK1P00995 79 aa4.79□□□□□ -1.64
CHD7-206ENST00000527900 MAP1LC3CQ9BXW4 147 aa4.79□□□□□ -1.64
CHD7-206ENST00000527900 J3QQQ9 107 aa4.78□□□□□ -1.64
CHD7-206ENST00000527900 EIF4EBP3O60516 100 aaPredicted RBP4.78□□□□□ -1.64
CHD7-206ENST00000527900 NDUFC2O95298 119 aa4.78□□□□□ -1.64
CHD7-206ENST00000527900 IGLV6-57P01721 117 aa4.78□□□□□ -1.64
CHD7-206ENST00000527900 PLNP26678 52 aa4.78□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 140.1 ms