RNA–Protein interactions for RNA: ENST00000527792.5

LTBP3-209, Transcript of latent transforming growth factor beta binding protein 3, humanhuman

TSL 2

Gene LTBP3, Length 923 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTBP3-209ENST00000527792 UQCR10Q9UDW1 63 aa9.82□□□□□ -0.84
LTBP3-209ENST00000527792 SRSF9Q13242 221 aaKnown RBP eCLIP9.81□□□□□ -0.84
LTBP3-209ENST00000527792 Q8N1X5 172 aa9.81□□□□□ -0.84
LTBP3-209ENST00000527792 LITAFQ99732 161 aa9.81□□□□□ -0.84
LTBP3-209ENST00000527792 MIEN1Q9BRT3 115 aa9.81□□□□□ -0.84
LTBP3-209ENST00000527792 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP9.81□□□□□ -0.84
LTBP3-209ENST00000527792 PANO1I0J062 215 aa9.79□□□□□ -0.84
LTBP3-209ENST00000527792 C9orf129Q5T035 196 aaKnown RBP9.79□□□□□ -0.84
LTBP3-209ENST00000527792 SPANXDQ9BXN6 97 aa9.79□□□□□ -0.84
LTBP3-209ENST00000527792 SPANXCQ9NY87 97 aa9.79□□□□□ -0.84
LTBP3-209ENST00000527792 SPACA4Q8TDM5 124 aa9.78□□□□□ -0.84
LTBP3-209ENST00000527792 HIST1H4GQ99525 98 aa9.78□□□□□ -0.84
LTBP3-209ENST00000527792 FAM30AQ9NZY2 134 aa9.78□□□□□ -0.84
LTBP3-209ENST00000527792 TSTD3H0UI37 97 aa9.77□□□□□ -0.85
LTBP3-209ENST00000527792 HNRNPA3P51991 378 aaKnown RBP9.77□□□□□ -0.85
LTBP3-209ENST00000527792 C2orf91Q6ZV80 131 aa9.77□□□□□ -0.85
LTBP3-209ENST00000527792 FAM19A5Q7Z5A7 132 aaPredicted RBP9.77□□□□□ -0.85
LTBP3-209ENST00000527792 LINC00308Q8TCZ7 52 aa9.77□□□□□ -0.85
LTBP3-209ENST00000527792 SPANXB1Q9NS25 103 aaPredicted RBP9.77□□□□□ -0.85
LTBP3-209ENST00000527792 HIGD1BQ9P298 99 aa9.77□□□□□ -0.85
LTBP3-209ENST00000527792 LRP1BQ9NZR2 4599 aa9.76□□□□□ -0.85
LTBP3-209ENST00000527792 FAM168BA1KXE4 195 aa9.76□□□□□ -0.85
LTBP3-209ENST00000527792 Q6ZVH6 145 aa9.76□□□□□ -0.85
LTBP3-209ENST00000527792 MUSTN1Q8IVN3 82 aa9.76□□□□□ -0.85
LTBP3-209ENST00000527792 COPS9Q8WXC6 57 aa9.76□□□□□ -0.85
LTBP3-209ENST00000527792 IFITM1P13164 125 aa9.75□□□□□ -0.85
LTBP3-209ENST00000527792 RPL24P83731 157 aaKnown RBP9.75□□□□□ -0.85
LTBP3-209ENST00000527792 SOSTDC1Q6X4U4 206 aa9.75□□□□□ -0.85
LTBP3-209ENST00000527792 A0A087WYN8 130 aa9.74□□□□□ -0.85
LTBP3-209ENST00000527792 A0A1W2PNN7 141 aa9.74□□□□□ -0.85
LTBP3-209ENST00000527792 HAMPP81172 84 aa9.74□□□□□ -0.85
LTBP3-209ENST00000527792 EIF4EBP3O60516 100 aaPredicted RBP9.73□□□□□ -0.85
LTBP3-209ENST00000527792 SERTAD4-AS1Q5TG53 156 aa9.73□□□□□ -0.85
LTBP3-209ENST00000527792 Q6ZSA8 131 aa9.73□□□□□ -0.85
LTBP3-209ENST00000527792 NKAPP1Q8N9T2 125 aa9.73□□□□□ -0.85
LTBP3-209ENST00000527792 PLA2G2DQ9UNK4 145 aa9.72□□□□□ -0.85
LTBP3-209ENST00000527792 LOC107984156A0A0G2JMH3 177 aa9.71□□□□□ -0.86
LTBP3-209ENST00000527792 NCR3O14931 201 aa9.71□□□□□ -0.86
LTBP3-209ENST00000527792 TAL2Q16559 108 aa9.71□□□□□ -0.86
LTBP3-209ENST00000527792 SCXQ7RTU7 201 aa9.71□□□□□ -0.86
LTBP3-209ENST00000527792 ARL17AQ8IVW1 177 aa9.71□□□□□ -0.86
LTBP3-209ENST00000527792 CIRBP-AS1Q8TBR5 109 aa9.71□□□□□ -0.86
LTBP3-209ENST00000527792 M0QXV9 152 aa9.7□□□□□ -0.86
LTBP3-209ENST00000527792 VPREB1P12018 145 aa9.7□□□□□ -0.86
LTBP3-209ENST00000527792 PRR3P79522 188 aaKnown RBP9.7□□□□□ -0.86
LTBP3-209ENST00000527792 PLAC8Q9NZF1 115 aa9.7□□□□□ -0.86
LTBP3-209ENST00000527792 C22orf24Q9Y442 160 aa9.7□□□□□ -0.86
LTBP3-209ENST00000527792 APOBP04114 4563 aaKnown RBP9.69□□□□□ -0.86
LTBP3-209ENST00000527792 HSD52Q0P140 79 aa9.69□□□□□ -0.86
LTBP3-209ENST00000527792 Q8NDZ9 215 aa9.69□□□□□ -0.86
LTBP3-209ENST00000527792 HERC1Q15751 4861 aa9.69□□□□□ -0.86
LTBP3-209ENST00000527792 DNAH5Q8TE73 4624 aa9.69□□□□□ -0.86
LTBP3-209ENST00000527792 GAGE10A6NGK3 116 aa9.68□□□□□ -0.86
LTBP3-209ENST00000527792 NDUFC2O95298 119 aa9.68□□□□□ -0.86
LTBP3-209ENST00000527792 PHF5AQ7RTV0 110 aaKnown RBP9.68□□□□□ -0.86
LTBP3-209ENST00000527792 KRTAP7-1Q8IUC3 87 aa9.68□□□□□ -0.86
LTBP3-209ENST00000527792 CEND1Q8N111 149 aa9.68□□□□□ -0.86
LTBP3-209ENST00000527792 IGLV5-37A0A075B6J1 123 aa9.67□□□□□ -0.86
LTBP3-209ENST00000527792 A4D1N5 150 aa9.67□□□□□ -0.86
LTBP3-209ENST00000527792 EPM2AB3EWF7 344 aa9.67□□□□□ -0.86
LTBP3-209ENST00000527792 CTAG1AP78358 180 aa9.67□□□□□ -0.86
LTBP3-209ENST00000527792 LBHQ53QV2 105 aaPredicted RBP9.67□□□□□ -0.86
LTBP3-209ENST00000527792 M0R378 163 aa9.66□□□□□ -0.86
LTBP3-209ENST00000527792 UBE2BP63146 152 aa9.66□□□□□ -0.86
LTBP3-209ENST00000527792 MRPL55Q7Z7F7 128 aaKnown RBP9.66□□□□□ -0.86
LTBP3-209ENST00000527792 PPDPFQ9H3Y8 114 aa9.66□□□□□ -0.86
LTBP3-209ENST00000527792 XGP55808 180 aa9.65□□□□□ -0.86
LTBP3-209ENST00000527792 S100A7L2Q5SY68 101 aa9.65□□□□□ -0.86
LTBP3-209ENST00000527792 OR13C6PQ8NH95 151 aa9.65□□□□□ -0.86
LTBP3-209ENST00000527792 C7orf33Q8WU49 177 aa9.65□□□□□ -0.86
LTBP3-209ENST00000527792 LINC00167Q96N53 147 aa9.65□□□□□ -0.86
LTBP3-209ENST00000527792 RPL37AP8A6NKH3 93 aa9.64□□□□□ -0.87
LTBP3-209ENST00000527792 INAFM2P0DMQ5 153 aa9.64□□□□□ -0.87
LTBP3-209ENST00000527792 DDTP30046 118 aa9.64□□□□□ -0.87
LTBP3-209ENST00000527792 TRBV10-2A0A0K0K1G8 114 aa9.63□□□□□ -0.87
LTBP3-209ENST00000527792 TMEM238LA0A1B0GVL6 79 aa9.63□□□□□ -0.87
LTBP3-209ENST00000527792 A6NJY4 79 aa9.63□□□□□ -0.87
LTBP3-209ENST00000527792 DMBT1Q9UGM3 2413 aaPredicted RBP9.63□□□□□ -0.87
LTBP3-209ENST00000527792 IGKV2-28A0A075B6P5 120 aa9.62□□□□□ -0.87
LTBP3-209ENST00000527792 A6NDN8 102 aa9.62□□□□□ -0.87
LTBP3-209ENST00000527792 PCP4L1A6NKN8 68 aa9.62□□□□□ -0.87
LTBP3-209ENST00000527792 IGKV2D-28P01615 120 aa9.62□□□□□ -0.87
LTBP3-209ENST00000527792 HINT1P49773 126 aaPredicted RBP9.62□□□□□ -0.87
LTBP3-209ENST00000527792 FXYD2P54710 66 aa9.62□□□□□ -0.87
LTBP3-209ENST00000527792 M0R143 59 aa9.61□□□□□ -0.87
LTBP3-209ENST00000527792 RAB37Q96AX2 223 aa9.61□□□□□ -0.87
LTBP3-209ENST00000527792 LCE2BO14633 110 aa9.6□□□□□ -0.87
LTBP3-209ENST00000527792 SMR3BP02814 79 aaPredicted RBP9.6□□□□□ -0.87
LTBP3-209ENST00000527792 TRAV13-2A0A0B4J235 113 aa9.59□□□□□ -0.87
LTBP3-209ENST00000527792 TRBV10-3A0A0K0K1G6 114 aa9.59□□□□□ -0.87
LTBP3-209ENST00000527792 BVES-AS1Q5T3Y7 98 aa9.59□□□□□ -0.87
LTBP3-209ENST00000527792 LINC00337Q8N6G1 96 aa9.59□□□□□ -0.87
LTBP3-209ENST00000527792 IGLV1-50A0A075B6I6 118 aa9.58□□□□□ -0.88
LTBP3-209ENST00000527792 CFC1BP0CG36 223 aa9.58□□□□□ -0.88
LTBP3-209ENST00000527792 CFC1P0CG37 223 aa9.58□□□□□ -0.88
LTBP3-209ENST00000527792 BATFQ16520 125 aa9.58□□□□□ -0.88
LTBP3-209ENST00000527792 TMEM126AQ9H061 195 aa9.58□□□□□ -0.88
LTBP3-209ENST00000527792 NHP2Q9NX24 153 aaKnown RBP9.58□□□□□ -0.88
LTBP3-209ENST00000527792 IGLV6-57P01721 117 aa9.56□□□□□ -0.88
LTBP3-209ENST00000527792 Q5VSD8 79 aa9.56□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 116.1 ms