RNA–Protein interactions for RNA: ENST00000524556.1

CSTF3-204, Transcript of cleavage stimulation factor subunit 3, humanhuman

TSL 3

Gene CSTF3, Length 558 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSTF3-204ENST00000524556 COX17Q14061 63 aa8.23□□□□□ -1.09
CSTF3-204ENST00000524556 KIAA1644Q3SXP7 199 aa8.23□□□□□ -1.09
CSTF3-204ENST00000524556 LINC01546A6NGU7 62 aa8.21□□□□□ -1.1
CSTF3-204ENST00000524556 LCE2CQ5TA81 110 aa8.21□□□□□ -1.1
CSTF3-204ENST00000524556 IGLC3P0DOY3 106 aa8.2□□□□□ -1.1
CSTF3-204ENST00000524556 ZNF625Q96I27 306 aaPredicted RBP8.2□□□□□ -1.1
CSTF3-204ENST00000524556 A0A1B0GVG6 124 aa8.19□□□□□ -1.1
CSTF3-204ENST00000524556 NDUFA12Q9UI09 145 aa8.19□□□□□ -1.1
CSTF3-204ENST00000524556 XP32Q5T750 250 aa8.18□□□□□ -1.1
CSTF3-204ENST00000524556 ZNF22P17026 224 aaPredicted RBP8.17□□□□□ -1.1
CSTF3-204ENST00000524556 SMCR5Q8TEV8 140 aa8.17□□□□□ -1.1
CSTF3-204ENST00000524556 RPS29P62273 56 aaKnown RBP8.16□□□□□ -1.1
CSTF3-204ENST00000524556 LINC00483Q53H64 154 aa8.16□□□□□ -1.1
CSTF3-204ENST00000524556 Q8N377 158 aa8.16□□□□□ -1.1
CSTF3-204ENST00000524556 PRYO14603 147 aa8.15□□□□□ -1.1
CSTF3-204ENST00000524556 KRTAP19-2Q3LHN2 52 aa8.15□□□□□ -1.1
CSTF3-204ENST00000524556 SFTA2Q6UW10 78 aa8.15□□□□□ -1.1
CSTF3-204ENST00000524556 FAM19A2Q8N3H0 131 aa8.15□□□□□ -1.1
CSTF3-204ENST00000524556 SPRR1AP35321 89 aa8.14□□□□□ -1.11
CSTF3-204ENST00000524556 SLC25A20O43772 301 aa8.13□□□□□ -1.11
CSTF3-204ENST00000524556 NDUFA6P56556 154 aa8.13□□□□□ -1.11
CSTF3-204ENST00000524556 LINC00158P58513 81 aa8.13□□□□□ -1.11
CSTF3-204ENST00000524556 MT1HP80294 61 aa8.13□□□□□ -1.11
CSTF3-204ENST00000524556 FA2HQ7L5A8 372 aa8.13□□□□□ -1.11
CSTF3-204ENST00000524556 KCNQ1DNQ9H478 68 aa8.13□□□□□ -1.11
CSTF3-204ENST00000524556 KRTAP4-16G5E9R7 235 aaPredicted RBP8.12□□□□□ -1.11
CSTF3-204ENST00000524556 SSBP3-AS1Q7Z2R9 100 aa8.12□□□□□ -1.11
CSTF3-204ENST00000524556 SMCO4Q9NRQ5 59 aa8.12□□□□□ -1.11
CSTF3-204ENST00000524556 ETDCA0A1B0GVM5 59 aa8.11□□□□□ -1.11
CSTF3-204ENST00000524556 CFC1BP0CG36 223 aa8.11□□□□□ -1.11
CSTF3-204ENST00000524556 MOBPQ13875 183 aa8.11□□□□□ -1.11
CSTF3-204ENST00000524556 GAGE2AQ6NT46 116 aa8.11□□□□□ -1.11
CSTF3-204ENST00000524556 TRAV9-1A0A075B6T8 112 aa8.1□□□□□ -1.11
CSTF3-204ENST00000524556 IGLV9-49A0A0B4J1Y8 123 aa8.1□□□□□ -1.11
CSTF3-204ENST00000524556 A0A0U1RRA0 63 aa8.09□□□□□ -1.11
CSTF3-204ENST00000524556 C11orf86A6NJI1 115 aa8.09□□□□□ -1.11
CSTF3-204ENST00000524556 A0A096LNJ9 63 aa8.08□□□□□ -1.12
CSTF3-204ENST00000524556 NCR3O14931 201 aa8.08□□□□□ -1.12
CSTF3-204ENST00000524556 TMEM170BQ5T4T1 132 aa8.08□□□□□ -1.12
CSTF3-204ENST00000524556 BOD1L2Q8IYS8 172 aa8.08□□□□□ -1.12
CSTF3-204ENST00000524556 ERC2-IT1O76042 136 aa8.06□□□□□ -1.12
CSTF3-204ENST00000524556 LORP23490 312 aaPredicted RBP8.06□□□□□ -1.12
CSTF3-204ENST00000524556 TRBV10-3A0A0K0K1G6 114 aa8.05□□□□□ -1.12
CSTF3-204ENST00000524556 B5MCH6 92 aa8.05□□□□□ -1.12
CSTF3-204ENST00000524556 ATP6V1G1O75348 118 aa8.05□□□□□ -1.12
CSTF3-204ENST00000524556 SMIM13P0DJ93 91 aa8.05□□□□□ -1.12
CSTF3-204ENST00000524556 BAGE3Q86Y29 109 aa8.05□□□□□ -1.12
CSTF3-204ENST00000524556 KRTAP10-6P60371 365 aaPredicted RBP8.04□□□□□ -1.12
CSTF3-204ENST00000524556 FABP9Q0Z7S8 132 aa8.04□□□□□ -1.12
CSTF3-204ENST00000524556 PCOTHQ58A44 107 aa8.04□□□□□ -1.12
CSTF3-204ENST00000524556 IGLV8-61A0A075B6I0 122 aa8.03□□□□□ -1.12
CSTF3-204ENST00000524556 HBDP02042 147 aa8.03□□□□□ -1.12
CSTF3-204ENST00000524556 URB1-AS1Q96HZ7 61 aa8.03□□□□□ -1.12
CSTF3-204ENST00000524556 S100PP25815 95 aa8.02□□□□□ -1.13
CSTF3-204ENST00000524556 S100A12P80511 92 aa8.02□□□□□ -1.13
CSTF3-204ENST00000524556 COX19Q49B96 90 aa8.02□□□□□ -1.13
CSTF3-204ENST00000524556 MIR7-3HGQ8N6C7 128 aa8.02□□□□□ -1.13
CSTF3-204ENST00000524556 Q9BRP9 147 aa8.02□□□□□ -1.13
CSTF3-204ENST00000524556 TMEM223A0PJW6 202 aa8.01□□□□□ -1.13
CSTF3-204ENST00000524556 LINC00614P0C842 121 aa8.01□□□□□ -1.13
CSTF3-204ENST00000524556 PMCHL1Q16048 86 aa8.01□□□□□ -1.13
CSTF3-204ENST00000524556 MEIG1Q5JSS6 88 aa8□□□□□ -1.13
CSTF3-204ENST00000524556 CHTOPQ9Y3Y2 248 aaKnown RBP8□□□□□ -1.13
CSTF3-204ENST00000524556 C9orf153Q5TBE3 101 aa7.99□□□□□ -1.13
CSTF3-204ENST00000524556 FLGP20930 4061 aaPredicted RBP7.98□□□□□ -1.13
CSTF3-204ENST00000524556 HERV-K104P63124 156 aa7.98□□□□□ -1.13
CSTF3-204ENST00000524556 Q6ZRX8 168 aa7.98□□□□□ -1.13
CSTF3-204ENST00000524556 C18orf32Q8TCD1 76 aa7.98□□□□□ -1.13
CSTF3-204ENST00000524556 SEC11CQ9BY50 192 aa7.98□□□□□ -1.13
CSTF3-204ENST00000524556 LINC00587B1AMM8 73 aa7.97□□□□□ -1.13
CSTF3-204ENST00000524556 DDTP30046 118 aa7.97□□□□□ -1.13
CSTF3-204ENST00000524556 TRBV10-2A0A0K0K1G8 114 aa7.95□□□□□ -1.14
CSTF3-204ENST00000524556 TMEM218A2RU14 115 aa7.95□□□□□ -1.14
CSTF3-204ENST00000524556 C9orf92A6NGG3 77 aa7.95□□□□□ -1.14
CSTF3-204ENST00000524556 TRAV12-1A0A0B4J245 112 aa7.94□□□□□ -1.14
CSTF3-204ENST00000524556 LOC107984156A0A0G2JMH3 177 aa7.94□□□□□ -1.14
CSTF3-204ENST00000524556 ARL17AQ8IVW1 177 aa7.94□□□□□ -1.14
CSTF3-204ENST00000524556 MAP1LC3CQ9BXW4 147 aa7.94□□□□□ -1.14
CSTF3-204ENST00000524556 M0R2T5 61 aa7.93□□□□□ -1.14
CSTF3-204ENST00000524556 JOSD1Q15040 202 aaPredicted RBP7.93□□□□□ -1.14
CSTF3-204ENST00000524556 MYMXA0A1B0GTQ4 84 aa7.92□□□□□ -1.14
CSTF3-204ENST00000524556 UQCC3Q6UW78 93 aa7.92□□□□□ -1.14
CSTF3-204ENST00000524556 LIMD2Q9BT23 127 aa7.92□□□□□ -1.14
CSTF3-204ENST00000524556 TRAPPC1Q9Y5R8 145 aa7.92□□□□□ -1.14
CSTF3-204ENST00000524556 CLLU1Q5K131 121 aa7.91□□□□□ -1.14
CSTF3-204ENST00000524556 ST20-AS1Q8NBB2 130 aa7.91□□□□□ -1.14
CSTF3-204ENST00000524556 IGLV6-57P01721 117 aa7.9□□□□□ -1.14
CSTF3-204ENST00000524556 IFI27L1Q96BM0 104 aa7.9□□□□□ -1.14
CSTF3-204ENST00000524556 SPANXB1Q9NS25 103 aaPredicted RBP7.9□□□□□ -1.14
CSTF3-204ENST00000524556 C5orf52A6NGY3 159 aa7.89□□□□□ -1.15
CSTF3-204ENST00000524556 S100A7L2Q5SY68 101 aa7.89□□□□□ -1.15
CSTF3-204ENST00000524556 HRCT1Q6UXD1 115 aa7.89□□□□□ -1.15
CSTF3-204ENST00000524556 TRAV23DV6A0A075B6W5 121 aa7.88□□□□□ -1.15
CSTF3-204ENST00000524556 ZNF73O43830 326 aaPredicted RBP7.86□□□□□ -1.15
CSTF3-204ENST00000524556 NDUFC2O95298 119 aa7.86□□□□□ -1.15
CSTF3-204ENST00000524556 TSPEAR-AS2P59090 65 aa7.86□□□□□ -1.15
CSTF3-204ENST00000524556 COX6B2Q6YFQ2 88 aa7.86□□□□□ -1.15
CSTF3-204ENST00000524556 KRTAP9-7A8MTY7 169 aa7.85□□□□□ -1.15
CSTF3-204ENST00000524556 SPRR1BP22528 89 aa7.85□□□□□ -1.15
CSTF3-204ENST00000524556 MIEN1Q9BRT3 115 aa7.85□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 162.4 ms