RNA–Protein interactions for RNA: ENST00000523555.5

PABPC1-222, Transcript of poly(A) binding protein cytoplasmic 1, humanhuman

TSL 3

Gene PABPC1, Length 522 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPC1-222ENST00000523555 IGKV2-28A0A075B6P5 120 aa5.71□□□□□ -1.5
PABPC1-222ENST00000523555 ZNF861PO60384 105 aa5.71□□□□□ -1.5
PABPC1-222ENST00000523555 HIST1H2BKO60814 126 aa5.71□□□□□ -1.5
PABPC1-222ENST00000523555 IGKV2D-28P01615 120 aa5.71□□□□□ -1.5
PABPC1-222ENST00000523555 HIST1H2BJP06899 126 aa5.71□□□□□ -1.5
PABPC1-222ENST00000523555 HIST1H2BOP23527 126 aa5.71□□□□□ -1.5
PABPC1-222ENST00000523555 HIST1H2BBP33778 126 aa5.71□□□□□ -1.5
PABPC1-222ENST00000523555 HIST1H2BDP58876 126 aa5.71□□□□□ -1.5
PABPC1-222ENST00000523555 HIST1H2BCP62807 126 aa5.71□□□□□ -1.5
PABPC1-222ENST00000523555 HIST2H2BEQ16778 126 aa5.71□□□□□ -1.5
PABPC1-222ENST00000523555 HIST2H2BFQ5QNW6 126 aaPredicted RBP5.71□□□□□ -1.5
PABPC1-222ENST00000523555 HIST1H2BHQ93079 126 aa5.71□□□□□ -1.5
PABPC1-222ENST00000523555 HIST1H2BNQ99877 126 aa5.71□□□□□ -1.5
PABPC1-222ENST00000523555 HIST1H2BMQ99879 126 aa5.71□□□□□ -1.5
PABPC1-222ENST00000523555 BCE1O60756 84 aa5.7□□□□□ -1.5
PABPC1-222ENST00000523555 SMIM13P0DJ93 91 aa5.7□□□□□ -1.5
PABPC1-222ENST00000523555 COX17Q14061 63 aa5.7□□□□□ -1.5
PABPC1-222ENST00000523555 NKAPP1Q8N9T2 125 aa5.7□□□□□ -1.5
PABPC1-222ENST00000523555 LINC00158P58513 81 aa5.69□□□□□ -1.5
PABPC1-222ENST00000523555 IGLV1-50A0A075B6I6 118 aa5.68□□□□□ -1.5
PABPC1-222ENST00000523555 TMEM238C9JI98 176 aa5.68□□□□□ -1.5
PABPC1-222ENST00000523555 KRTAP13-1Q8IUC0 172 aa5.68□□□□□ -1.5
PABPC1-222ENST00000523555 HSPB8Q9UJY1 196 aa5.68□□□□□ -1.5
PABPC1-222ENST00000523555 MEIG1Q5JSS6 88 aa5.67□□□□□ -1.5
PABPC1-222ENST00000523555 SFTA2Q6UW10 78 aa5.67□□□□□ -1.5
PABPC1-222ENST00000523555 MIR7-3HGQ8N6C7 128 aa5.67□□□□□ -1.5
PABPC1-222ENST00000523555 NDUFA12Q9UI09 145 aa5.67□□□□□ -1.5
PABPC1-222ENST00000523555 A0A087X002 238 aa5.66□□□□□ -1.5
PABPC1-222ENST00000523555 M0R378 163 aa5.66□□□□□ -1.5
PABPC1-222ENST00000523555 LEPROTO15243 131 aa5.66□□□□□ -1.5
PABPC1-222ENST00000523555 DPM2O94777 84 aa5.66□□□□□ -1.5
PABPC1-222ENST00000523555 IGKCP01834 107 aa5.66□□□□□ -1.5
PABPC1-222ENST00000523555 PRLHP81277 87 aa5.66□□□□□ -1.5
PABPC1-222ENST00000523555 DAND5Q8N907 189 aa5.66□□□□□ -1.5
PABPC1-222ENST00000523555 TMEM126AQ9H061 195 aa5.66□□□□□ -1.5
PABPC1-222ENST00000523555 ANAPC11Q9NYG5 84 aa5.66□□□□□ -1.5
PABPC1-222ENST00000523555 PLNP26678 52 aa5.65□□□□□ -1.5
PABPC1-222ENST00000523555 RPL28P46779 137 aaKnown RBP5.65□□□□□ -1.5
PABPC1-222ENST00000523555 RPL24P83731 157 aaKnown RBP5.65□□□□□ -1.5
PABPC1-222ENST00000523555 MAP1LC3CQ9BXW4 147 aa5.65□□□□□ -1.5
PABPC1-222ENST00000523555 MYMXA0A1B0GTQ4 84 aa5.64□□□□□ -1.51
PABPC1-222ENST00000523555 SYS1-DBNDD2H3BUS1 97 aa5.64□□□□□ -1.51
PABPC1-222ENST00000523555 J3QQQ9 107 aa5.64□□□□□ -1.51
PABPC1-222ENST00000523555 NCR3O14931 201 aa5.64□□□□□ -1.51
PABPC1-222ENST00000523555 UBE2AP49459 152 aa5.64□□□□□ -1.51
PABPC1-222ENST00000523555 HERV-K104P63124 156 aa5.64□□□□□ -1.51
PABPC1-222ENST00000523555 FAM19A1Q7Z5A9 133 aa5.64□□□□□ -1.51
PABPC1-222ENST00000523555 EIF4EBP3O60516 100 aaPredicted RBP5.63□□□□□ -1.51
PABPC1-222ENST00000523555 BOD1L2Q8IYS8 172 aa5.63□□□□□ -1.51
PABPC1-222ENST00000523555 PLEKHB2Q96CS7 222 aa5.63□□□□□ -1.51
PABPC1-222ENST00000523555 KRTAP13-2Q52LG2 175 aa5.62□□□□□ -1.51
PABPC1-222ENST00000523555 E9PLD3 99 aa5.61□□□□□ -1.51
PABPC1-222ENST00000523555 C3orf79P0CE67 100 aa5.61□□□□□ -1.51
PABPC1-222ENST00000523555 LGALS3P17931 250 aaKnown RBP5.61□□□□□ -1.51
PABPC1-222ENST00000523555 HERVK_113P61574 105 aa5.61□□□□□ -1.51
PABPC1-222ENST00000523555 COA6Q5JTJ3 125 aaKnown RBP5.61□□□□□ -1.51
PABPC1-222ENST00000523555 LINC01545Q5VT33 79 aa5.61□□□□□ -1.51
PABPC1-222ENST00000523555 SOSTDC1Q6X4U4 206 aa5.61□□□□□ -1.51
PABPC1-222ENST00000523555 IGKV2D-26A0A0A0MRZ7 120 aa5.6□□□□□ -1.51
PABPC1-222ENST00000523555 A0A0J9YXY3 114 aa5.6□□□□□ -1.51
PABPC1-222ENST00000523555 NPC2P61916 151 aa5.6□□□□□ -1.51
PABPC1-222ENST00000523555 ADAMTSL4-AS1Q5T5F5 129 aa5.6□□□□□ -1.51
PABPC1-222ENST00000523555 TTTY13Q9BZ97 58 aa5.6□□□□□ -1.51
PABPC1-222ENST00000523555 RNF213Q63HN8 5207 aa5.6□□□□□ -1.51
PABPC1-222ENST00000523555 LOC107984156A0A0G2JMH3 177 aa5.59□□□□□ -1.51
PABPC1-222ENST00000523555 TRBV10-3A0A0K0K1G6 114 aa5.59□□□□□ -1.51
PABPC1-222ENST00000523555 KRTAP4-16G5E9R7 235 aaPredicted RBP5.59□□□□□ -1.51
PABPC1-222ENST00000523555 SPRR1AP35321 89 aa5.59□□□□□ -1.51
PABPC1-222ENST00000523555 RPL13AP40429 203 aaKnown RBP5.59□□□□□ -1.51
PABPC1-222ENST00000523555 NMUP48645 174 aa5.59□□□□□ -1.51
PABPC1-222ENST00000523555 PET117Q6UWS5 81 aa5.59□□□□□ -1.51
PABPC1-222ENST00000523555 ARL17AQ8IVW1 177 aa5.59□□□□□ -1.51
PABPC1-222ENST00000523555 LINC00587B1AMM8 73 aa5.58□□□□□ -1.52
PABPC1-222ENST00000523555 PRYO14603 147 aa5.58□□□□□ -1.52
PABPC1-222ENST00000523555 CRYGAP11844 174 aa5.58□□□□□ -1.52
PABPC1-222ENST00000523555 KRTDAPP60985 99 aa5.58□□□□□ -1.52
PABPC1-222ENST00000523555 LITAFQ99732 161 aa5.58□□□□□ -1.52
PABPC1-222ENST00000523555 HIGD2AQ9BW72 106 aa5.58□□□□□ -1.52
PABPC1-222ENST00000523555 KCNQ1DNQ9H478 68 aa5.58□□□□□ -1.52
PABPC1-222ENST00000523555 TSPAN13O95857 204 aa5.57□□□□□ -1.52
PABPC1-222ENST00000523555 TYMSOSQ8TAI1 123 aa5.57□□□□□ -1.52
PABPC1-222ENST00000523555 ATOH7Q8N100 152 aa5.56□□□□□ -1.52
PABPC1-222ENST00000523555 C3orf22Q8N5N4 141 aa5.56□□□□□ -1.52
PABPC1-222ENST00000523555 SMCR5Q8TEV8 140 aa5.56□□□□□ -1.52
PABPC1-222ENST00000523555 DDTP30046 118 aa5.55□□□□□ -1.52
PABPC1-222ENST00000523555 FAM229BQ4G0N7 80 aa5.55□□□□□ -1.52
PABPC1-222ENST00000523555 ANKRD39Q53RE8 183 aa5.55□□□□□ -1.52
PABPC1-222ENST00000523555 LINC00337Q8N6G1 96 aa5.55□□□□□ -1.52
PABPC1-222ENST00000523555 SPRR4Q96PI1 79 aa5.55□□□□□ -1.52
PABPC1-222ENST00000523555 TRBV10-2A0A0K0K1G8 114 aa5.54□□□□□ -1.52
PABPC1-222ENST00000523555 ZNF815PA8K554 130 aa5.54□□□□□ -1.52
PABPC1-222ENST00000523555 B5MCH6 92 aa5.54□□□□□ -1.52
PABPC1-222ENST00000523555 ERC2-IT1O76042 136 aa5.54□□□□□ -1.52
PABPC1-222ENST00000523555 NDUFC2O95298 119 aa5.54□□□□□ -1.52
PABPC1-222ENST00000523555 S100A6P06703 90 aa5.54□□□□□ -1.52
PABPC1-222ENST00000523555 MIEN1Q9BRT3 115 aa5.54□□□□□ -1.52
PABPC1-222ENST00000523555 SPANXB1Q9NS25 103 aaPredicted RBP5.54□□□□□ -1.52
PABPC1-222ENST00000523555 ETDCA0A1B0GVM5 59 aa5.53□□□□□ -1.52
PABPC1-222ENST00000523555 IGLV6-57P01721 117 aa5.53□□□□□ -1.52
PABPC1-222ENST00000523555 LINC00308Q8TCZ7 52 aa5.53□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 50.5 ms