RNA–Protein interactions for RNA: ENST00000521932.1

VPS13B-210, Transcript of vacuolar protein sorting 13 homolog B, humanhuman

TSL 3

Gene VPS13B, Length 1,055 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13B-210ENST00000521932 J3QQQ9 107 aa5.3□□□□□ -1.56
VPS13B-210ENST00000521932 COX17Q14061 63 aa5.3□□□□□ -1.56
VPS13B-210ENST00000521932 Q6ZRP5 223 aa5.3□□□□□ -1.56
VPS13B-210ENST00000521932 STPG4Q8N801 248 aa5.3□□□□□ -1.56
VPS13B-210ENST00000521932 SPACA4Q8TDM5 124 aa5.3□□□□□ -1.56
VPS13B-210ENST00000521932 PLEKHB2Q96CS7 222 aa5.3□□□□□ -1.56
VPS13B-210ENST00000521932 EPM2AB3EWF7 344 aa5.29□□□□□ -1.56
VPS13B-210ENST00000521932 NMUP48645 174 aa5.29□□□□□ -1.56
VPS13B-210ENST00000521932 TSPEAR-AS2P59090 65 aa5.29□□□□□ -1.56
VPS13B-210ENST00000521932 HERV-K104P63124 156 aa5.29□□□□□ -1.56
VPS13B-210ENST00000521932 CIRBP-AS1Q8TBR5 109 aa5.29□□□□□ -1.56
VPS13B-210ENST00000521932 NDUFA12Q9UI09 145 aa5.29□□□□□ -1.56
VPS13B-210ENST00000521932 BIRC6Q9NR09 4857 aa5.29□□□□□ -1.56
VPS13B-210ENST00000521932 MYMXA0A1B0GTQ4 84 aa5.28□□□□□ -1.56
VPS13B-210ENST00000521932 CHTF8P0CG12 524 aa5.28□□□□□ -1.56
VPS13B-210ENST00000521932 RPL18AQ02543 176 aaKnown RBP5.28□□□□□ -1.56
VPS13B-210ENST00000521932 GAGE2BQ13066 116 aa5.28□□□□□ -1.56
VPS13B-210ENST00000521932 SCXQ7RTU7 201 aa5.28□□□□□ -1.56
VPS13B-210ENST00000521932 HSPG2P98160 4391 aa5.28□□□□□ -1.56
VPS13B-210ENST00000521932 A0A087WYN8 130 aa5.27□□□□□ -1.57
VPS13B-210ENST00000521932 IGKV2D-26A0A0A0MRZ7 120 aa5.27□□□□□ -1.57
VPS13B-210ENST00000521932 IGKV2-24A0A0C4DH68 120 aa5.27□□□□□ -1.57
VPS13B-210ENST00000521932 LINC00587B1AMM8 73 aa5.27□□□□□ -1.57
VPS13B-210ENST00000521932 LGALS3P17931 250 aaKnown RBP5.27□□□□□ -1.57
VPS13B-210ENST00000521932 JOSD1Q15040 202 aaPredicted RBP5.27□□□□□ -1.57
VPS13B-210ENST00000521932 MAJINQ3KP22 176 aa5.27□□□□□ -1.57
VPS13B-210ENST00000521932 ATOH7Q8N100 152 aa5.27□□□□□ -1.57
VPS13B-210ENST00000521932 MPLKIPQ8TAP9 179 aa5.27□□□□□ -1.57
VPS13B-210ENST00000521932 DPH3Q96FX2 82 aa5.27□□□□□ -1.57
VPS13B-210ENST00000521932 PLAC8Q9NZF1 115 aa5.27□□□□□ -1.57
VPS13B-210ENST00000521932 ERG28Q9UKR5 140 aa5.27□□□□□ -1.57
VPS13B-210ENST00000521932 PFN2P35080 140 aa5.26□□□□□ -1.57
VPS13B-210ENST00000521932 GAGE2EQ4V326 116 aa5.26□□□□□ -1.57
VPS13B-210ENST00000521932 C9orf129Q5T035 196 aaKnown RBP5.26□□□□□ -1.57
VPS13B-210ENST00000521932 GAGE2DQ9UEU5 116 aa5.26□□□□□ -1.57
VPS13B-210ENST00000521932 A0A1W2PNN7 141 aa5.25□□□□□ -1.57
VPS13B-210ENST00000521932 FAT1Q14517 4588 aa5.24□□□□□ -1.57
VPS13B-210ENST00000521932 A0A0J9YXY3 114 aa5.24□□□□□ -1.57
VPS13B-210ENST00000521932 HSBP1L1C9JCN9 74 aa5.24□□□□□ -1.57
VPS13B-210ENST00000521932 SMIM13P0DJ93 91 aa5.24□□□□□ -1.57
VPS13B-210ENST00000521932 LINC00158P58513 81 aa5.24□□□□□ -1.57
VPS13B-210ENST00000521932 HAMPP81172 84 aa5.24□□□□□ -1.57
VPS13B-210ENST00000521932 KRTAP7-1Q8IUC3 87 aa5.24□□□□□ -1.57
VPS13B-210ENST00000521932 XAGE1AQ9HD64 81 aa5.24□□□□□ -1.57
VPS13B-210ENST00000521932 RYR1P21817 5038 aa5.24□□□□□ -1.57
VPS13B-210ENST00000521932 LOC107984156A0A0G2JMH3 177 aa5.23□□□□□ -1.57
VPS13B-210ENST00000521932 FAM168BA1KXE4 195 aa5.23□□□□□ -1.57
VPS13B-210ENST00000521932 PYY3Q5JQD4 70 aa5.23□□□□□ -1.57
VPS13B-210ENST00000521932 MEIG1Q5JSS6 88 aa5.23□□□□□ -1.57
VPS13B-210ENST00000521932 ARL17AQ8IVW1 177 aa5.23□□□□□ -1.57
VPS13B-210ENST00000521932 TTTY13Q9BZ97 58 aa5.23□□□□□ -1.57
VPS13B-210ENST00000521932 SND1-IT1Q9HBX3 110 aa5.23□□□□□ -1.57
VPS13B-210ENST00000521932 ZNF815PA8K554 130 aa5.22□□□□□ -1.57
VPS13B-210ENST00000521932 TIMM17BO60830 172 aa5.22□□□□□ -1.57
VPS13B-210ENST00000521932 SMR3BP02814 79 aaPredicted RBP5.22□□□□□ -1.57
VPS13B-210ENST00000521932 PCP2Q8IVA1 136 aa5.22□□□□□ -1.57
VPS13B-210ENST00000521932 MIR7-3HGQ8N6C7 128 aa5.22□□□□□ -1.57
VPS13B-210ENST00000521932 A0A0U1RRA0 63 aa5.21□□□□□ -1.58
VPS13B-210ENST00000521932 ADAMTSL4-AS1Q5T5F5 129 aa5.21□□□□□ -1.58
VPS13B-210ENST00000521932 LITAFQ99732 161 aa5.21□□□□□ -1.58
VPS13B-210ENST00000521932 PAM16Q9Y3D7 125 aa5.21□□□□□ -1.58
VPS13B-210ENST00000521932 IGLV5-37A0A075B6J1 123 aa5.2□□□□□ -1.58
VPS13B-210ENST00000521932 TP73-AS1Q9UF72 201 aa5.2□□□□□ -1.58
VPS13B-210ENST00000521932 C22orf24Q9Y442 160 aa5.2□□□□□ -1.58
VPS13B-210ENST00000521932 DLEU1O43261 78 aa5.19□□□□□ -1.58
VPS13B-210ENST00000521932 COX8AP10176 69 aa5.19□□□□□ -1.58
VPS13B-210ENST00000521932 VPREB1P12018 145 aa5.19□□□□□ -1.58
VPS13B-210ENST00000521932 RPL24P83731 157 aaKnown RBP5.19□□□□□ -1.58
VPS13B-210ENST00000521932 LCE1AQ5T7P2 110 aa5.19□□□□□ -1.58
VPS13B-210ENST00000521932 SCGB1D4Q6XE38 83 aa5.19□□□□□ -1.58
VPS13B-210ENST00000521932 PHF5AQ7RTV0 110 aaKnown RBP5.19□□□□□ -1.58
VPS13B-210ENST00000521932 FAM19A5Q7Z5A7 132 aaPredicted RBP5.19□□□□□ -1.58
VPS13B-210ENST00000521932 BOD1L2Q8IYS8 172 aa5.19□□□□□ -1.58
VPS13B-210ENST00000521932 DAND5Q8N907 189 aa5.19□□□□□ -1.58
VPS13B-210ENST00000521932 C7orf33Q8WU49 177 aa5.19□□□□□ -1.58
VPS13B-210ENST00000521932 VAMP8Q9BV40 100 aa5.19□□□□□ -1.58
VPS13B-210ENST00000521932 M0QXV9 152 aa5.18□□□□□ -1.58
VPS13B-210ENST00000521932 KRTAP10-4P60372 401 aaPredicted RBP5.18□□□□□ -1.58
VPS13B-210ENST00000521932 SPATA45Q537H7 98 aa5.18□□□□□ -1.58
VPS13B-210ENST00000521932 LBHQ53QV2 105 aaPredicted RBP5.18□□□□□ -1.58
VPS13B-210ENST00000521932 Q6ZVH6 145 aa5.18□□□□□ -1.58
VPS13B-210ENST00000521932 MRPL55Q7Z7F7 128 aaKnown RBP5.18□□□□□ -1.58
VPS13B-210ENST00000521932 Q8NDZ9 215 aa5.18□□□□□ -1.58
VPS13B-210ENST00000521932 SPANXDQ9BXN6 97 aa5.18□□□□□ -1.58
VPS13B-210ENST00000521932 SPANXCQ9NY87 97 aa5.18□□□□□ -1.58
VPS13B-210ENST00000521932 HERC2O95714 4834 aa5.18□□□□□ -1.58
VPS13B-210ENST00000521932 TMEM238C9JI98 176 aa5.17□□□□□ -1.58
VPS13B-210ENST00000521932 NDUFC2O95298 119 aa5.17□□□□□ -1.58
VPS13B-210ENST00000521932 Q5VSD8 79 aa5.17□□□□□ -1.58
VPS13B-210ENST00000521932 SOSTDC1Q6X4U4 206 aa5.17□□□□□ -1.58
VPS13B-210ENST00000521932 LINC00308Q8TCZ7 52 aa5.17□□□□□ -1.58
VPS13B-210ENST00000521932 PPDPFQ9H3Y8 114 aa5.17□□□□□ -1.58
VPS13B-210ENST00000521932 LOC105371267A0A1B0GV96 52 aa5.16□□□□□ -1.58
VPS13B-210ENST00000521932 KRTAP11-1Q8IUC1 163 aa5.16□□□□□ -1.58
VPS13B-210ENST00000521932 NKAPP1Q8N9T2 125 aa5.16□□□□□ -1.58
VPS13B-210ENST00000521932 C14orf144Q96I85 54 aa5.16□□□□□ -1.58
VPS13B-210ENST00000521932 LINC00167Q96N53 147 aa5.16□□□□□ -1.58
VPS13B-210ENST00000521932 MIEN1Q9BRT3 115 aa5.16□□□□□ -1.58
VPS13B-210ENST00000521932 SPANXB1Q9NS25 103 aaPredicted RBP5.16□□□□□ -1.58
VPS13B-210ENST00000521932 IGLV1-50A0A075B6I6 118 aa5.15□□□□□ -1.59
Retrieved 100 of 20,778 RNA–protein pairs in 72.3 ms