RNA–Protein interactions for RNA: ENST00000521724.5

CTNNA1-230, Transcript of catenin alpha 1, humanhuman

TSL 2

Gene CTNNA1, Length 2,741 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA1-230ENST00000521724 MIFP14174 115 aa6.63□□□□□ -1.35
CTNNA1-230ENST00000521724 ATP5EP56381 51 aaPredicted RBP6.63□□□□□ -1.35
CTNNA1-230ENST00000521724 KRTAP10-9P60411 292 aa6.63□□□□□ -1.35
CTNNA1-230ENST00000521724 LINC00575Q6W349 94 aa6.63□□□□□ -1.35
CTNNA1-230ENST00000521724 Q8IZM0 81 aa6.63□□□□□ -1.35
CTNNA1-230ENST00000521724 BBC3Q96PG8 261 aaPredicted RBP6.63□□□□□ -1.35
CTNNA1-230ENST00000521724 DEFB114Q30KQ6 69 aa6.63□□□□□ -1.35
CTNNA1-230ENST00000521724 APCP25054 2843 aa6.62□□□□□ -1.35
CTNNA1-230ENST00000521724 ODF3L2Q3SX64 289 aa6.62□□□□□ -1.35
CTNNA1-230ENST00000521724 UBR5O95071 2799 aaPredicted RBP6.62□□□□□ -1.35
CTNNA1-230ENST00000521724 TRBV7-4A0A0J9YYF1 115 aa6.62□□□□□ -1.35
CTNNA1-230ENST00000521724 C6orf223Q8N319 242 aa6.62□□□□□ -1.35
CTNNA1-230ENST00000521724 C1orf195Q5TG92 126 aa6.61□□□□□ -1.35
CTNNA1-230ENST00000521724 ZNF843Q8N446 348 aa6.61□□□□□ -1.35
CTNNA1-230ENST00000521724 SCXQ7RTU7 201 aa6.61□□□□□ -1.35
CTNNA1-230ENST00000521724 MPLKIPQ8TAP9 179 aa6.61□□□□□ -1.35
CTNNA1-230ENST00000521724 CR1P17927 2039 aa6.6□□□□□ -1.35
CTNNA1-230ENST00000521724 PDE6GP18545 87 aa6.6□□□□□ -1.35
CTNNA1-230ENST00000521724 ACANP16112 2415 aa6.6□□□□□ -1.35
CTNNA1-230ENST00000521724 CLPSL2Q6UWE3 100 aa6.6□□□□□ -1.35
CTNNA1-230ENST00000521724 TMEM254Q8TBM7 123 aa6.6□□□□□ -1.35
CTNNA1-230ENST00000521724 ITPR3Q14573 2671 aa6.59□□□□□ -1.35
CTNNA1-230ENST00000521724 COX17Q14061 63 aa6.59□□□□□ -1.35
CTNNA1-230ENST00000521724 NREPQ16612 68 aa6.59□□□□□ -1.35
CTNNA1-230ENST00000521724 Q6YL49 198 aa6.59□□□□□ -1.35
CTNNA1-230ENST00000521724 Q6ZQY7 126 aa6.59□□□□□ -1.35
CTNNA1-230ENST00000521724 C9orf116Q5BN46 136 aaPredicted RBP6.58□□□□□ -1.36
CTNNA1-230ENST00000521724 MTORP42345 2549 aa6.58□□□□□ -1.36
CTNNA1-230ENST00000521724 FLNAP21333 2647 aaKnown RBP6.58□□□□□ -1.36
CTNNA1-230ENST00000521724 TENM4Q6N022 2769 aa6.58□□□□□ -1.36
CTNNA1-230ENST00000521724 BPY2O14599 106 aa6.58□□□□□ -1.36
CTNNA1-230ENST00000521724 C9orf66Q5T8R8 295 aa6.58□□□□□ -1.36
CTNNA1-230ENST00000521724 C16orf74Q96GX8 76 aa6.58□□□□□ -1.36
CTNNA1-230ENST00000521724 FAM229BQ4G0N7 80 aa6.57□□□□□ -1.36
CTNNA1-230ENST00000521724 MUC7Q8TAX7 377 aa6.57□□□□□ -1.36
CTNNA1-230ENST00000521724 FSHBP01225 129 aa6.57□□□□□ -1.36
CTNNA1-230ENST00000521724 Q8NDZ9 215 aa6.57□□□□□ -1.36
CTNNA1-230ENST00000521724 SPATA3Q8NHX4 192 aa6.57□□□□□ -1.36
CTNNA1-230ENST00000521724 C4orf3Q8WVX3 66 aa6.57□□□□□ -1.36
CTNNA1-230ENST00000521724 PLAC8L1A1L4L8 177 aa6.56□□□□□ -1.36
CTNNA1-230ENST00000521724 IGHV4-31P0DP07 118 aa6.56□□□□□ -1.36
CTNNA1-230ENST00000521724 PLA2G2AP14555 144 aa6.56□□□□□ -1.36
CTNNA1-230ENST00000521724 SETXQ7Z333 2677 aaKnown RBP6.56□□□□□ -1.36
CTNNA1-230ENST00000521724 LINC00269Q8N2A0 174 aa6.56□□□□□ -1.36
CTNNA1-230ENST00000521724 KIAA0087Q14695 138 aa6.55□□□□□ -1.36
CTNNA1-230ENST00000521724 FN1P02751 2386 aaKnown RBP6.54□□□□□ -1.36
CTNNA1-230ENST00000521724 H3BQ85 93 aa6.54□□□□□ -1.36
CTNNA1-230ENST00000521724 ERC2-IT1O76042 136 aa6.54□□□□□ -1.36
CTNNA1-230ENST00000521724 DSCR9P59020 149 aa6.54□□□□□ -1.36
CTNNA1-230ENST00000521724 A0A1B0GUV1 79 aa6.54□□□□□ -1.36
CTNNA1-230ENST00000521724 ESRGQ1W209 222 aa6.54□□□□□ -1.36
CTNNA1-230ENST00000521724 IGHV4-28A0A0C4DH34 117 aa6.53□□□□□ -1.36
CTNNA1-230ENST00000521724 ITPR2Q14571 2701 aa6.53□□□□□ -1.36
CTNNA1-230ENST00000521724 IGLV10-54A0A075B6I4 117 aa6.53□□□□□ -1.36
CTNNA1-230ENST00000521724 GIG44P09565 113 aaPredicted RBP6.53□□□□□ -1.36
CTNNA1-230ENST00000521724 FUSP35637 526 aaKnown RBP eCLIP6.53□□□□□ -1.36
CTNNA1-230ENST00000521724 Q8N9L7 120 aa6.52□□□□□ -1.37
CTNNA1-230ENST00000521724 DEFB130BP0DP73 79 aa6.52□□□□□ -1.37
CTNNA1-230ENST00000521724 DEFB130AP0DP74 79 aa6.52□□□□□ -1.37
CTNNA1-230ENST00000521724 IGLV6-57P01721 117 aa6.51□□□□□ -1.37
CTNNA1-230ENST00000521724 KRTAP3-3Q9BYR6 98 aa6.51□□□□□ -1.37
CTNNA1-230ENST00000521724 KRTAP3-2Q9BYR7 98 aa6.51□□□□□ -1.37
CTNNA1-230ENST00000521724 A0A096LPF7 62 aa6.51□□□□□ -1.37
CTNNA1-230ENST00000521724 C11orf45Q8TAV5 145 aa6.51□□□□□ -1.37
CTNNA1-230ENST00000521724 CHCHD10Q8WYQ3 142 aaPredicted RBP6.5□□□□□ -1.37
CTNNA1-230ENST00000521724 WFDC10AQ9H1F0 79 aa6.5□□□□□ -1.37
CTNNA1-230ENST00000521724 LINC01006Q8NI28 216 aa6.5□□□□□ -1.37
CTNNA1-230ENST00000521724 Q6ZTC4 211 aa6.49□□□□□ -1.37
CTNNA1-230ENST00000521724 DIRC1Q969H9 104 aa6.49□□□□□ -1.37
CTNNA1-230ENST00000521724 OCR1Q9BZK8 76 aa6.49□□□□□ -1.37
CTNNA1-230ENST00000521724 DAD1P61803 113 aa6.49□□□□□ -1.37
CTNNA1-230ENST00000521724 UNQ6190/PRO20217Q6UXQ8 127 aa6.49□□□□□ -1.37
CTNNA1-230ENST00000521724 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP6.49□□□□□ -1.37
CTNNA1-230ENST00000521724 HIGD2AQ9BW72 106 aa6.49□□□□□ -1.37
CTNNA1-230ENST00000521724 ANGP03950 147 aaKnown RBP6.48□□□□□ -1.37
CTNNA1-230ENST00000521724 COX7BP24311 80 aa6.48□□□□□ -1.37
CTNNA1-230ENST00000521724 C10orf25Q5T742 122 aa6.48□□□□□ -1.37
CTNNA1-230ENST00000521724 IGKV4-1P06312 121 aa6.48□□□□□ -1.37
CTNNA1-230ENST00000521724 NBEAL2Q6ZNJ1 2754 aa6.47□□□□□ -1.37
CTNNA1-230ENST00000521724 HELZ2Q9BYK8 2649 aaKnown RBP6.47□□□□□ -1.37
CTNNA1-230ENST00000521724 REG3AQ06141 175 aa6.47□□□□□ -1.37
CTNNA1-230ENST00000521724 Q75L30 129 aa6.47□□□□□ -1.37
CTNNA1-230ENST00000521724 CSNK1G2-AS1Q8NCQ2 148 aa6.47□□□□□ -1.37
CTNNA1-230ENST00000521724 ZNF73O43830 326 aaPredicted RBP6.47□□□□□ -1.37
CTNNA1-230ENST00000521724 KRTAP1-3Q8IUG1 177 aa6.47□□□□□ -1.37
CTNNA1-230ENST00000521724 SPAG11BQ08648 103 aa6.46□□□□□ -1.38
CTNNA1-230ENST00000521724 DEFB113Q30KQ7 82 aa6.46□□□□□ -1.38
CTNNA1-230ENST00000521724 ESM1Q9NQ30 184 aa6.46□□□□□ -1.38
CTNNA1-230ENST00000521724 NOTCH2Q04721 2471 aa6.46□□□□□ -1.38
CTNNA1-230ENST00000521724 LRCOL1A6NCL2 159 aa6.46□□□□□ -1.38
CTNNA1-230ENST00000521724 CYSRT1A8MQ03 144 aa6.46□□□□□ -1.38
CTNNA1-230ENST00000521724 C19orf73Q9NVV2 129 aa6.45□□□□□ -1.38
CTNNA1-230ENST00000521724 PDZD2O15018 2839 aa6.45□□□□□ -1.38
CTNNA1-230ENST00000521724 CMC4P56277 68 aaPredicted RBP6.45□□□□□ -1.38
CTNNA1-230ENST00000521724 XAGE1AQ9HD64 81 aa6.45□□□□□ -1.38
CTNNA1-230ENST00000521724 ANK3Q12955 4377 aaKnown RBP6.45□□□□□ -1.38
CTNNA1-230ENST00000521724 PRR15Q8IV56 129 aa6.44□□□□□ -1.38
CTNNA1-230ENST00000521724 FASNP49327 2511 aaKnown RBP6.44□□□□□ -1.38
CTNNA1-230ENST00000521724 ELOF1P60002 83 aaKnown RBP6.44□□□□□ -1.38
CTNNA1-230ENST00000521724 PMAIP1Q13794 54 aa6.44□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 64.2 ms