RNA–Protein interactions for RNA: ENST00000520497.1

VAPB-206, Transcript of VAMP associated protein B and C, humanhuman

TSL 2

Gene VAPB, Length 937 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAPB-206ENST00000520497 DAND5Q8N907 189 aa5.63□□□□□ -1.51
VAPB-206ENST00000520497 NTN5Q8WTR8 489 aaPredicted RBP5.63□□□□□ -1.51
VAPB-206ENST00000520497 KRTAP17-1Q9BYP8 105 aa5.63□□□□□ -1.51
VAPB-206ENST00000520497 DNAH10Q8IVF4 4471 aa5.63□□□□□ -1.51
VAPB-206ENST00000520497 A0A1W2PPM0 123 aa5.62□□□□□ -1.51
VAPB-206ENST00000520497 PSCAO43653 123 aa5.62□□□□□ -1.51
VAPB-206ENST00000520497 COX6CP09669 75 aa5.62□□□□□ -1.51
VAPB-206ENST00000520497 CFC1BP0CG36 223 aa5.62□□□□□ -1.51
VAPB-206ENST00000520497 CFC1P0CG37 223 aa5.62□□□□□ -1.51
VAPB-206ENST00000520497 PSMB2P49721 201 aa5.62□□□□□ -1.51
VAPB-206ENST00000520497 C14orf177Q52M58 125 aa5.62□□□□□ -1.51
VAPB-206ENST00000520497 C2orf82Q6UX34 121 aa5.62□□□□□ -1.51
VAPB-206ENST00000520497 KRTAP19-1Q8IUB9 90 aa5.62□□□□□ -1.51
VAPB-206ENST00000520497 TRAV13-2A0A0B4J235 113 aa5.61□□□□□ -1.51
VAPB-206ENST00000520497 GAGE10A6NGK3 116 aa5.61□□□□□ -1.51
VAPB-206ENST00000520497 USP17L23D6RBM5 183 aa5.61□□□□□ -1.51
VAPB-206ENST00000520497 M0R2N4 97 aa5.61□□□□□ -1.51
VAPB-206ENST00000520497 HIGD2BQ4VC39 106 aa5.61□□□□□ -1.51
VAPB-206ENST00000520497 FRAS1Q86XX4 4008 aa5.61□□□□□ -1.51
VAPB-206ENST00000520497 SND1-IT1Q9HBX3 110 aa5.61□□□□□ -1.51
VAPB-206ENST00000520497 LOC107984156A0A0G2JMH3 177 aa5.6□□□□□ -1.51
VAPB-206ENST00000520497 TSPAN13O95857 204 aa5.6□□□□□ -1.51
VAPB-206ENST00000520497 SCGB1C2P0DMR2 95 aa5.6□□□□□ -1.51
VAPB-206ENST00000520497 RPL13AP40429 203 aaKnown RBP5.6□□□□□ -1.51
VAPB-206ENST00000520497 UNQ6190/PRO20217Q6UXQ8 127 aa5.6□□□□□ -1.51
VAPB-206ENST00000520497 ARL17AQ8IVW1 177 aa5.6□□□□□ -1.51
VAPB-206ENST00000520497 C6orf223Q8N319 242 aa5.6□□□□□ -1.51
VAPB-206ENST00000520497 PKIGQ9Y2B9 76 aa5.6□□□□□ -1.51
VAPB-206ENST00000520497 SPCS1Q9Y6A9 102 aa5.6□□□□□ -1.51
VAPB-206ENST00000520497 TRBV20-1A0A075B6N2 111 aa5.59□□□□□ -1.51
VAPB-206ENST00000520497 LRCOL1A6NCL2 159 aa5.59□□□□□ -1.51
VAPB-206ENST00000520497 H7C2G1 150 aa5.59□□□□□ -1.51
VAPB-206ENST00000520497 K7EP34 96 aa5.59□□□□□ -1.51
VAPB-206ENST00000520497 SYCNQ0VAF6 134 aa5.59□□□□□ -1.51
VAPB-206ENST00000520497 UBE2V1Q13404 147 aa5.59□□□□□ -1.51
VAPB-206ENST00000520497 WFDC2Q14508 124 aa5.59□□□□□ -1.51
VAPB-206ENST00000520497 LINC00526Q96FQ7 95 aa5.59□□□□□ -1.51
VAPB-206ENST00000520497 CARD19Q96LW7 228 aa5.59□□□□□ -1.51
VAPB-206ENST00000520497 NDUFC2O95298 119 aa5.58□□□□□ -1.52
VAPB-206ENST00000520497 RNF151Q2KHN1 245 aa5.58□□□□□ -1.52
VAPB-206ENST00000520497 C10orf25Q5T742 122 aa5.58□□□□□ -1.52
VAPB-206ENST00000520497 NAA38Q9BRA0 125 aaKnown RBP5.58□□□□□ -1.52
VAPB-206ENST00000520497 CBY1Q9Y3M2 126 aa5.58□□□□□ -1.52
VAPB-206ENST00000520497 HECTD4Q9Y4D8 3996 aa5.57□□□□□ -1.52
VAPB-206ENST00000520497 LECT2O14960 151 aa5.57□□□□□ -1.52
VAPB-206ENST00000520497 C1orf134Q5TEV5 83 aa5.57□□□□□ -1.52
VAPB-206ENST00000520497 SOSTDC1Q6X4U4 206 aa5.57□□□□□ -1.52
VAPB-206ENST00000520497 Q6ZRU5 148 aa5.57□□□□□ -1.52
VAPB-206ENST00000520497 C6orf48Q9UBA6 75 aa5.57□□□□□ -1.52
VAPB-206ENST00000520497 DNAH2Q9P225 4427 aa5.56□□□□□ -1.52
VAPB-206ENST00000520497 NDUFC2-KCTD14E9PQ53 114 aa5.56□□□□□ -1.52
VAPB-206ENST00000520497 SLPIP03973 132 aa5.56□□□□□ -1.52
VAPB-206ENST00000520497 OR13C6PQ8NH95 151 aa5.56□□□□□ -1.52
VAPB-206ENST00000520497 HERC2O95714 4834 aa5.55□□□□□ -1.52
VAPB-206ENST00000520497 ATXN8Q156A1 80 aa5.55□□□□□ -1.52
VAPB-206ENST00000520497 C9orf116Q5BN46 136 aaPredicted RBP5.55□□□□□ -1.52
VAPB-206ENST00000520497 S100A7L2Q5SY68 101 aa5.55□□□□□ -1.52
VAPB-206ENST00000520497 KRTAP4-7Q9BYR0 210 aa5.55□□□□□ -1.52
VAPB-206ENST00000520497 A0A087WTM6 91 aa5.54□□□□□ -1.52
VAPB-206ENST00000520497 TRBV10-2A0A0K0K1G8 114 aa5.54□□□□□ -1.52
VAPB-206ENST00000520497 SNCGO76070 127 aa5.54□□□□□ -1.52
VAPB-206ENST00000520497 TLX1NBP0CAT3 122 aa5.54□□□□□ -1.52
VAPB-206ENST00000520497 CNBPP62633 177 aaKnown RBP5.54□□□□□ -1.52
VAPB-206ENST00000520497 TMEM126AQ9H061 195 aa5.54□□□□□ -1.52
VAPB-206ENST00000520497 LOC107984640A0A0U1RRK4 108 aa5.53□□□□□ -1.52
VAPB-206ENST00000520497 RTL8CO15255 209 aa5.53□□□□□ -1.52
VAPB-206ENST00000520497 TRIAP1O43715 76 aa5.53□□□□□ -1.52
VAPB-206ENST00000520497 EIF4EBP3O60516 100 aaPredicted RBP5.53□□□□□ -1.52
VAPB-206ENST00000520497 RPL18AQ02543 176 aaKnown RBP5.53□□□□□ -1.52
VAPB-206ENST00000520497 Q8N814 137 aa5.53□□□□□ -1.52
VAPB-206ENST00000520497 IGKV2-28A0A075B6P5 120 aa5.52□□□□□ -1.53
VAPB-206ENST00000520497 H0YGX0 51 aa5.52□□□□□ -1.53
VAPB-206ENST00000520497 IGKV2D-28P01615 120 aa5.52□□□□□ -1.53
VAPB-206ENST00000520497 RPL28P46779 137 aaKnown RBP5.52□□□□□ -1.53
VAPB-206ENST00000520497 LINC00337Q8N6G1 96 aa5.52□□□□□ -1.53
VAPB-206ENST00000520497 NKAPP1Q8N9T2 125 aa5.52□□□□□ -1.53
VAPB-206ENST00000520497 DNAH17Q9UFH2 4485 aa5.52□□□□□ -1.53
VAPB-206ENST00000520497 F8W1H4 67 aa5.51□□□□□ -1.53
VAPB-206ENST00000520497 NCR3O14931 201 aa5.51□□□□□ -1.53
VAPB-206ENST00000520497 GAGE2EQ4V326 116 aa5.51□□□□□ -1.53
VAPB-206ENST00000520497 GAGE2DQ9UEU5 116 aa5.51□□□□□ -1.53
VAPB-206ENST00000520497 IGLV2-33A0A075B6J2 118 aaPredicted RBP5.5□□□□□ -1.53
VAPB-206ENST00000520497 H3BMG7 143 aa5.5□□□□□ -1.53
VAPB-206ENST00000520497 M0R378 163 aa5.5□□□□□ -1.53
VAPB-206ENST00000520497 TCL1BO95988 128 aa5.5□□□□□ -1.53
VAPB-206ENST00000520497 Q6ZRP5 223 aa5.5□□□□□ -1.53
VAPB-206ENST00000520497 XAGE1AQ9HD64 81 aa5.5□□□□□ -1.53
VAPB-206ENST00000520497 FAT2Q9NYQ8 4349 aa5.49□□□□□ -1.53
VAPB-206ENST00000520497 DNAL4O96015 105 aa5.49□□□□□ -1.53
VAPB-206ENST00000520497 C9orf163Q8N9P6 203 aa5.49□□□□□ -1.53
VAPB-206ENST00000520497 SMIM11BQ8TCY0 68 aa5.49□□□□□ -1.53
VAPB-206ENST00000520497 PLA2G2DQ9UNK4 145 aa5.49□□□□□ -1.53
VAPB-206ENST00000520497 LST1O00453 97 aa5.48□□□□□ -1.53
VAPB-206ENST00000520497 TRACP01848 142 aa5.48□□□□□ -1.53
VAPB-206ENST00000520497 VPREB1P12018 145 aa5.48□□□□□ -1.53
VAPB-206ENST00000520497 GAGE2BQ13066 116 aa5.48□□□□□ -1.53
VAPB-206ENST00000520497 LINC01620Q4KN68 170 aa5.48□□□□□ -1.53
VAPB-206ENST00000520497 A0A1B0GX51 115 aa5.47□□□□□ -1.53
VAPB-206ENST00000520497 C9JAW5 83 aa5.47□□□□□ -1.53
VAPB-206ENST00000520497 C9orf129Q5T035 196 aaKnown RBP5.47□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 18.2 ms