RNA–Protein interactions for RNA: ENST00000520170.1

HDAC2-207, Transcript of histone deacetylase 2, humanhuman

TSL 2

Gene HDAC2, Length 690 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC2-207ENST00000520170 LINC00337Q8N6G1 96 aa11.38□□□□□ -0.59
HDAC2-207ENST00000520170 A0A096LNJ9 63 aa11.37□□□□□ -0.59
HDAC2-207ENST00000520170 FP248Q71RG6 208 aaPredicted RBP11.37□□□□□ -0.59
HDAC2-207ENST00000520170 LINC00158P58513 81 aa11.36□□□□□ -0.59
HDAC2-207ENST00000520170 TMEM170BQ5T4T1 132 aa11.36□□□□□ -0.59
HDAC2-207ENST00000520170 DAND5Q8N907 189 aa11.36□□□□□ -0.59
HDAC2-207ENST00000520170 TMEM218A2RU14 115 aa11.35□□□□□ -0.59
HDAC2-207ENST00000520170 C11orf86A6NJI1 115 aa11.35□□□□□ -0.59
HDAC2-207ENST00000520170 COX19Q49B96 90 aa11.35□□□□□ -0.59
HDAC2-207ENST00000520170 ZNF706Q9Y5V0 76 aaPredicted RBP11.35□□□□□ -0.59
HDAC2-207ENST00000520170 A0A0U1RRA0 63 aa11.34□□□□□ -0.59
HDAC2-207ENST00000520170 CLLU1Q5K131 121 aa11.34□□□□□ -0.59
HDAC2-207ENST00000520170 SFTA2Q6UW10 78 aa11.34□□□□□ -0.59
HDAC2-207ENST00000520170 BAGE3Q86Y29 109 aa11.34□□□□□ -0.59
HDAC2-207ENST00000520170 Q8NBF4 154 aa11.34□□□□□ -0.59
HDAC2-207ENST00000520170 PMCHL1Q16048 86 aa11.33□□□□□ -0.6
HDAC2-207ENST00000520170 KRTAP13-3Q3SY46 172 aa11.33□□□□□ -0.6
HDAC2-207ENST00000520170 HBDP02042 147 aa11.32□□□□□ -0.6
HDAC2-207ENST00000520170 UQCC3Q6UW78 93 aa11.32□□□□□ -0.6
HDAC2-207ENST00000520170 URB1-AS1Q96HZ7 61 aa11.32□□□□□ -0.6
HDAC2-207ENST00000520170 LINC00614P0C842 121 aa11.31□□□□□ -0.6
HDAC2-207ENST00000520170 ASB16-AS1Q495Z4 193 aa11.3□□□□□ -0.6
HDAC2-207ENST00000520170 LINC01547P58512 204 aaPredicted RBP11.29□□□□□ -0.6
HDAC2-207ENST00000520170 C18orf32Q8TCD1 76 aa11.29□□□□□ -0.6
HDAC2-207ENST00000520170 SMCR5Q8TEV8 140 aa11.29□□□□□ -0.6
HDAC2-207ENST00000520170 SEC11CQ9BY50 192 aa11.29□□□□□ -0.6
HDAC2-207ENST00000520170 PRYO14603 147 aa11.28□□□□□ -0.6
HDAC2-207ENST00000520170 NCR3O14931 201 aa11.27□□□□□ -0.61
HDAC2-207ENST00000520170 ATP6V1G1O75348 118 aa11.27□□□□□ -0.61
HDAC2-207ENST00000520170 SPINK1P00995 79 aa11.27□□□□□ -0.61
HDAC2-207ENST00000520170 BOD1L2Q8IYS8 172 aa11.27□□□□□ -0.61
HDAC2-207ENST00000520170 SMIM13P0DJ93 91 aa11.26□□□□□ -0.61
HDAC2-207ENST00000520170 KRTAP4-1Q9BYQ7 146 aa11.26□□□□□ -0.61
HDAC2-207ENST00000520170 CHTOPQ9Y3Y2 248 aaKnown RBP11.26□□□□□ -0.61
HDAC2-207ENST00000520170 ETDCA0A1B0GVM5 59 aa11.25□□□□□ -0.61
HDAC2-207ENST00000520170 TRAPPC1Q9Y5R8 145 aa11.25□□□□□ -0.61
HDAC2-207ENST00000520170 SPRR1AP35321 89 aa11.24□□□□□ -0.61
HDAC2-207ENST00000520170 SEC61BP60468 96 aaKnown RBP11.24□□□□□ -0.61
HDAC2-207ENST00000520170 KCNQ1DNQ9H478 68 aa11.24□□□□□ -0.61
HDAC2-207ENST00000520170 RPS10P5Q9NQ39 176 aa11.24□□□□□ -0.61
HDAC2-207ENST00000520170 TMEM223A0PJW6 202 aa11.23□□□□□ -0.61
HDAC2-207ENST00000520170 MEIG1Q5JSS6 88 aa11.23□□□□□ -0.61
HDAC2-207ENST00000520170 KRTAP4-16G5E9R7 235 aaPredicted RBP11.22□□□□□ -0.61
HDAC2-207ENST00000520170 GAGE2AQ6NT46 116 aa11.22□□□□□ -0.61
HDAC2-207ENST00000520170 MIR7-3HGQ8N6C7 128 aa11.22□□□□□ -0.61
HDAC2-207ENST00000520170 LINC00483Q53H64 154 aa11.21□□□□□ -0.61
HDAC2-207ENST00000520170 IGLV9-49A0A0B4J1Y8 123 aa11.2□□□□□ -0.62
HDAC2-207ENST00000520170 TRBV10-3A0A0K0K1G6 114 aa11.2□□□□□ -0.62
HDAC2-207ENST00000520170 MOBPQ13875 183 aa11.2□□□□□ -0.62
HDAC2-207ENST00000520170 NDUFA12Q9UI09 145 aa11.2□□□□□ -0.62
HDAC2-207ENST00000520170 RHEBQ15382 184 aa11.19□□□□□ -0.62
HDAC2-207ENST00000520170 Q8N377 158 aa11.17□□□□□ -0.62
HDAC2-207ENST00000520170 B5MCH6 92 aa11.16□□□□□ -0.62
HDAC2-207ENST00000520170 ERC2-IT1O76042 136 aa11.16□□□□□ -0.62
HDAC2-207ENST00000520170 HERV-K104P63124 156 aa11.16□□□□□ -0.62
HDAC2-207ENST00000520170 S100A12P80511 92 aa11.16□□□□□ -0.62
HDAC2-207ENST00000520170 COMMD7Q86VX2 200 aa11.16□□□□□ -0.62
HDAC2-207ENST00000520170 TRAV12-1A0A0B4J245 112 aa11.15□□□□□ -0.62
HDAC2-207ENST00000520170 IFITM2Q01629 132 aa11.15□□□□□ -0.62
HDAC2-207ENST00000520170 C10orf91Q5T1B1 145 aa11.15□□□□□ -0.62
HDAC2-207ENST00000520170 SSBP3-AS1Q7Z2R9 100 aa11.15□□□□□ -0.62
HDAC2-207ENST00000520170 FAM19A2Q8N3H0 131 aa11.15□□□□□ -0.62
HDAC2-207ENST00000520170 IFI27L1Q96BM0 104 aa11.15□□□□□ -0.62
HDAC2-207ENST00000520170 LINC00587B1AMM8 73 aa11.13□□□□□ -0.63
HDAC2-207ENST00000520170 SLC25A20O43772 301 aa11.13□□□□□ -0.63
HDAC2-207ENST00000520170 RPS29P62273 56 aaKnown RBP11.13□□□□□ -0.63
HDAC2-207ENST00000520170 MAP1LC3CQ9BXW4 147 aa11.12□□□□□ -0.63
HDAC2-207ENST00000520170 MYMXA0A1B0GTQ4 84 aa11.11□□□□□ -0.63
HDAC2-207ENST00000520170 Q9BRP9 147 aa11.11□□□□□ -0.63
HDAC2-207ENST00000520170 DDTP30046 118 aa11.1□□□□□ -0.63
HDAC2-207ENST00000520170 XP32Q5T750 250 aa11.09□□□□□ -0.63
HDAC2-207ENST00000520170 CHCHD1Q96BP2 118 aaKnown RBP11.08□□□□□ -0.64
HDAC2-207ENST00000520170 Q6ZRX8 168 aa11.07□□□□□ -0.64
HDAC2-207ENST00000520170 C9orf153Q5TBE3 101 aa11.06□□□□□ -0.64
HDAC2-207ENST00000520170 CRCT1Q9UGL9 99 aa11.06□□□□□ -0.64
HDAC2-207ENST00000520170 TRBV10-2A0A0K0K1G8 114 aa11.05□□□□□ -0.64
HDAC2-207ENST00000520170 H0Y8G0 127 aa11.05□□□□□ -0.64
HDAC2-207ENST00000520170 TSPEAR-AS2P59090 65 aa11.05□□□□□ -0.64
HDAC2-207ENST00000520170 LOC107984156A0A0G2JMH3 177 aa11.04□□□□□ -0.64
HDAC2-207ENST00000520170 ARL17AQ8IVW1 177 aa11.04□□□□□ -0.64
HDAC2-207ENST00000520170 FSIP2Q5CZC0 6907 aa11.04□□□□□ -0.64
HDAC2-207ENST00000520170 S100A7L2Q5SY68 101 aa11.02□□□□□ -0.65
HDAC2-207ENST00000520170 LCE2CQ5TA81 110 aa11.02□□□□□ -0.65
HDAC2-207ENST00000520170 SPANXB1Q9NS25 103 aaPredicted RBP11.02□□□□□ -0.65
HDAC2-207ENST00000520170 LEPROTO15243 131 aa11.01□□□□□ -0.65
HDAC2-207ENST00000520170 APOC3P02656 99 aa11.01□□□□□ -0.65
HDAC2-207ENST00000520170 MIEN1Q9BRT3 115 aa11.01□□□□□ -0.65
HDAC2-207ENST00000520170 HSBP1O75506 76 aa11□□□□□ -0.65
HDAC2-207ENST00000520170 JOSD1Q15040 202 aaPredicted RBP11□□□□□ -0.65
HDAC2-207ENST00000520170 IGLV6-57P01721 117 aa10.99□□□□□ -0.65
HDAC2-207ENST00000520170 ST20-AS1Q8NBB2 130 aa10.99□□□□□ -0.65
HDAC2-207ENST00000520170 TRAV23DV6A0A075B6W5 121 aa10.98□□□□□ -0.65
HDAC2-207ENST00000520170 J3QQQ9 107 aa10.97□□□□□ -0.65
HDAC2-207ENST00000520170 SNAPINO95295 136 aa10.97□□□□□ -0.65
HDAC2-207ENST00000520170 NDUFC2O95298 119 aa10.96□□□□□ -0.65
HDAC2-207ENST00000520170 PCOTHQ58A44 107 aa10.95□□□□□ -0.66
HDAC2-207ENST00000520170 ZNF73O43830 326 aaPredicted RBP10.94□□□□□ -0.66
HDAC2-207ENST00000520170 LGALS3P17931 250 aaKnown RBP10.94□□□□□ -0.66
HDAC2-207ENST00000520170 NPC2P61916 151 aa10.94□□□□□ -0.66
HDAC2-207ENST00000520170 KRTAP19-2Q3LHN2 52 aa10.94□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 18.1 ms