RNA–Protein interactions for RNA: ENST00000519914.5

SDC2-204, Transcript of syndecan 2, humanhuman

TSL 2 BASIC

Gene SDC2, Length 1,318 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDC2-204ENST00000519914 HIST2H2BCQ6DN03 193 aa3.48□□□□□ -1.85
SDC2-204ENST00000519914 Q6JHZ5 121 aa3.48□□□□□ -1.85
SDC2-204ENST00000519914 Q8N9P0 234 aaPredicted RBP3.48□□□□□ -1.85
SDC2-204ENST00000519914 PRO0255Q9UI72 69 aa3.48□□□□□ -1.85
SDC2-204ENST00000519914 MAP1AP78559 2803 aaPredicted RBP3.48□□□□□ -1.85
SDC2-204ENST00000519914 IGKV2-28A0A075B6P5 120 aa3.47□□□□□ -1.85
SDC2-204ENST00000519914 FAM236DA0A1B0GTK5 79 aa3.47□□□□□ -1.85
SDC2-204ENST00000519914 IGKV2D-28P01615 120 aa3.47□□□□□ -1.85
SDC2-204ENST00000519914 FAM236CP0DP71 79 aa3.47□□□□□ -1.85
SDC2-204ENST00000519914 LINC00336Q6ZUF6 198 aa3.47□□□□□ -1.85
SDC2-204ENST00000519914 Q8IZM0 81 aa3.47□□□□□ -1.85
SDC2-204ENST00000519914 MUC7Q8TAX7 377 aa3.47□□□□□ -1.85
SDC2-204ENST00000519914 CLEC2BQ92478 149 aa3.47□□□□□ -1.85
SDC2-204ENST00000519914 CCDC168Q8NDH2 2452 aa3.47□□□□□ -1.85
SDC2-204ENST00000519914 IGHV4-28A0A0C4DH34 117 aa3.46□□□□□ -1.85
SDC2-204ENST00000519914 TRBV10-3A0A0K0K1G6 114 aa3.46□□□□□ -1.85
SDC2-204ENST00000519914 H0YGX0 51 aa3.46□□□□□ -1.85
SDC2-204ENST00000519914 CCL18P55774 89 aa3.46□□□□□ -1.85
SDC2-204ENST00000519914 MIR7-3HGQ8N6C7 128 aa3.46□□□□□ -1.85
SDC2-204ENST00000519914 WFDC9Q8NEX5 89 aa3.46□□□□□ -1.85
SDC2-204ENST00000519914 UPK3BQ9BT76 320 aa3.46□□□□□ -1.85
SDC2-204ENST00000519914 FAM30AQ9NZY2 134 aa3.46□□□□□ -1.85
SDC2-204ENST00000519914 C22orf24Q9Y442 160 aa3.46□□□□□ -1.85
SDC2-204ENST00000519914 ACANP16112 2415 aa3.46□□□□□ -1.86
SDC2-204ENST00000519914 CENPEQ02224 2701 aa3.46□□□□□ -1.86
SDC2-204ENST00000519914 C2CD3Q4AC94 2353 aa3.46□□□□□ -1.86
SDC2-204ENST00000519914 HIVEP2P31629 2446 aa3.46□□□□□ -1.86
SDC2-204ENST00000519914 CRPP02741 224 aa3.45□□□□□ -1.86
SDC2-204ENST00000519914 MIFP14174 115 aa3.45□□□□□ -1.86
SDC2-204ENST00000519914 APOC4P55056 127 aa3.45□□□□□ -1.86
SDC2-204ENST00000519914 PMAIP1Q13794 54 aa3.45□□□□□ -1.86
SDC2-204ENST00000519914 COX17Q14061 63 aa3.45□□□□□ -1.86
SDC2-204ENST00000519914 KIAA0087Q14695 138 aa3.45□□□□□ -1.86
SDC2-204ENST00000519914 SS18Q15532 418 aa3.45□□□□□ -1.86
SDC2-204ENST00000519914 LINC00337Q8N6G1 96 aa3.45□□□□□ -1.86
SDC2-204ENST00000519914 Q8NAQ8 132 aa3.45□□□□□ -1.86
SDC2-204ENST00000519914 OBSCN-AS1Q96MR7 158 aa3.45□□□□□ -1.86
SDC2-204ENST00000519914 LINC00167Q96N53 147 aa3.45□□□□□ -1.86
SDC2-204ENST00000519914 SND1-IT1Q9HBX3 110 aa3.45□□□□□ -1.86
SDC2-204ENST00000519914 PKIGQ9Y2B9 76 aa3.45□□□□□ -1.86
SDC2-204ENST00000519914 HELZ2Q9BYK8 2649 aaKnown RBP3.45□□□□□ -1.86
SDC2-204ENST00000519914 JMJD1CQ15652 2540 aa3.45□□□□□ -1.86
SDC2-204ENST00000519914 TRBV7-6A0A0J9YX20 115 aa3.44□□□□□ -1.86
SDC2-204ENST00000519914 A0A0U1RQV1 116 aa3.44□□□□□ -1.86
SDC2-204ENST00000519914 A0A0U1RRA0 63 aa3.44□□□□□ -1.86
SDC2-204ENST00000519914 CD164L2Q6UWJ8 174 aa3.44□□□□□ -1.86
SDC2-204ENST00000519914 C3orf56Q8N813 242 aa3.44□□□□□ -1.86
SDC2-204ENST00000519914 FAM218AQ96MZ4 157 aa3.44□□□□□ -1.86
SDC2-204ENST00000519914 USP17L23D6RBM5 183 aa3.44□□□□□ -1.86
SDC2-204ENST00000519914 DNAL4O96015 105 aa3.44□□□□□ -1.86
SDC2-204ENST00000519914 IGKV2-30P06310 120 aa3.44□□□□□ -1.86
SDC2-204ENST00000519914 BAALC-AS2P0C853 105 aa3.44□□□□□ -1.86
SDC2-204ENST00000519914 DEFB130BP0DP73 79 aa3.44□□□□□ -1.86
SDC2-204ENST00000519914 DEFB130AP0DP74 79 aa3.44□□□□□ -1.86
SDC2-204ENST00000519914 MTORP42345 2549 aa3.44□□□□□ -1.86
SDC2-204ENST00000519914 LINC00158P58513 81 aa3.44□□□□□ -1.86
SDC2-204ENST00000519914 LELP1Q5T871 98 aa3.44□□□□□ -1.86
SDC2-204ENST00000519914 PRR15Q8IV56 129 aa3.44□□□□□ -1.86
SDC2-204ENST00000519914 SMIM11BQ8TCY0 68 aa3.44□□□□□ -1.86
SDC2-204ENST00000519914 DSCR8Q96T75 97 aa3.44□□□□□ -1.86
SDC2-204ENST00000519914 PRR34Q9NV39 138 aa3.44□□□□□ -1.86
SDC2-204ENST00000519914 DNAH1Q9P2D7 4330 aa3.44□□□□□ -1.86
SDC2-204ENST00000519914 KLK5Q9Y337 293 aaPredicted RBP3.44□□□□□ -1.86
SDC2-204ENST00000519914 NF1P21359 2839 aa3.43□□□□□ -1.86
SDC2-204ENST00000519914 TRAV7A0A075B6U4 112 aa3.43□□□□□ -1.86
SDC2-204ENST00000519914 GVQW2A0A096LPI5 108 aaPredicted RBP3.43□□□□□ -1.86
SDC2-204ENST00000519914 H3BNG1 76 aa3.43□□□□□ -1.86
SDC2-204ENST00000519914 Q6ZRU5 148 aa3.43□□□□□ -1.86
SDC2-204ENST00000519914 SPATA3Q8NHX4 192 aa3.43□□□□□ -1.86
SDC2-204ENST00000519914 SMR3AQ99954 134 aa3.43□□□□□ -1.86
SDC2-204ENST00000519914 TOMM7Q9P0U1 55 aa3.43□□□□□ -1.86
SDC2-204ENST00000519914 A0A0J9YWU9 116 aa3.42□□□□□ -1.86
SDC2-204ENST00000519914 IGHV4-30-4P0DP06 118 aa3.42□□□□□ -1.86
SDC2-204ENST00000519914 NANOS2P60321 138 aaKnown RBP3.42□□□□□ -1.86
SDC2-204ENST00000519914 DAD1P61803 113 aa3.42□□□□□ -1.86
SDC2-204ENST00000519914 KLKP1Q107X0 134 aa3.42□□□□□ -1.86
SDC2-204ENST00000519914 MRPL55Q7Z7F7 128 aaKnown RBP3.42□□□□□ -1.86
SDC2-204ENST00000519914 BRK1Q8WUW1 75 aa3.42□□□□□ -1.86
SDC2-204ENST00000519914 CHCHD10Q8WYQ3 142 aaPredicted RBP3.42□□□□□ -1.86
SDC2-204ENST00000519914 FN1P02751 2386 aaKnown RBP3.41□□□□□ -1.86
SDC2-204ENST00000519914 TENM4Q6N022 2769 aa3.41□□□□□ -1.86
SDC2-204ENST00000519914 ITPR2Q14571 2701 aa3.41□□□□□ -1.86
SDC2-204ENST00000519914 A0A087WYN8 130 aa3.41□□□□□ -1.86
SDC2-204ENST00000519914 IGKV3OR2-268A0A0C4DH90 116 aa3.41□□□□□ -1.86
SDC2-204ENST00000519914 INAFM1C9JVW0 142 aa3.41□□□□□ -1.86
SDC2-204ENST00000519914 SPART-AS1P0CW21 52 aa3.41□□□□□ -1.86
SDC2-204ENST00000519914 XCL1P47992 114 aa3.41□□□□□ -1.86
SDC2-204ENST00000519914 REG3AQ06141 175 aa3.41□□□□□ -1.86
SDC2-204ENST00000519914 DEFB135Q30KP9 77 aa3.41□□□□□ -1.86
SDC2-204ENST00000519914 FAM19A1Q7Z5A9 133 aa3.41□□□□□ -1.86
SDC2-204ENST00000519914 LINC00269Q8N2A0 174 aa3.41□□□□□ -1.86
SDC2-204ENST00000519914 KRTAP1-5Q9BYS1 174 aa3.41□□□□□ -1.86
SDC2-204ENST00000519914 CELA1Q9UNI1 258 aa3.41□□□□□ -1.86
SDC2-204ENST00000519914 A0A096LPF7 62 aa3.4□□□□□ -1.87
SDC2-204ENST00000519914 H3BQ85 93 aa3.4□□□□□ -1.87
SDC2-204ENST00000519914 ERC2-IT1O76042 136 aa3.4□□□□□ -1.87
SDC2-204ENST00000519914 NOTCH2Q04721 2471 aa3.4□□□□□ -1.87
SDC2-204ENST00000519914 ANK2Q01484 3957 aa3.4□□□□□ -1.87
SDC2-204ENST00000519914 TRRAPQ9Y4A5 3859 aa3.39□□□□□ -1.87
SDC2-204ENST00000519914 JMJD7-PLA2G4BH0Y9G9 81 aa3.39□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 6.7 ms