RNA–Protein interactions for RNA: ENST00000519895.5

MCF2-208, Transcript of MCF.2 cell line derived transforming sequence, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene MCF2, Length 3,346 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2-208ENST00000519895 A0A096LNJ9 63 aa1.81□□□□□ -2.12
MCF2-208ENST00000519895 IGHV3-73A0A0B4J1V6 119 aa1.81□□□□□ -2.12
MCF2-208ENST00000519895 H0Y9J4 135 aa1.81□□□□□ -2.12
MCF2-208ENST00000519895 NDUFA1O15239 70 aa1.81□□□□□ -2.12
MCF2-208ENST00000519895 PSCAO43653 123 aa1.81□□□□□ -2.12
MCF2-208ENST00000519895 APOC3P02656 99 aa1.81□□□□□ -2.12
MCF2-208ENST00000519895 COPS9Q8WXC6 57 aa1.81□□□□□ -2.12
MCF2-208ENST00000519895 PLEKHB2Q96CS7 222 aa1.81□□□□□ -2.12
MCF2-208ENST00000519895 UBE2WQ96B02 151 aa1.81□□□□□ -2.12
MCF2-208ENST00000519895 SCGB3A1Q96QR1 104 aa1.81□□□□□ -2.12
MCF2-208ENST00000519895 TRBV10-2A0A0K0K1G8 114 aa1.81□□□□□ -2.12
MCF2-208ENST00000519895 C20orf202A1L168 122 aa1.81□□□□□ -2.12
MCF2-208ENST00000519895 IFITM10A6NMD0 228 aa1.81□□□□□ -2.12
MCF2-208ENST00000519895 TMEM262E9PQX1 116 aa1.81□□□□□ -2.12
MCF2-208ENST00000519895 F8VRH5 84 aa1.81□□□□□ -2.12
MCF2-208ENST00000519895 IGHV3-30P01768 117 aa1.81□□□□□ -2.12
MCF2-208ENST00000519895 IGHV3-33P01772 117 aa1.81□□□□□ -2.12
MCF2-208ENST00000519895 IGHV3-30-3P0DP02 117 aa1.81□□□□□ -2.12
MCF2-208ENST00000519895 IGHV3-30-5P0DP03 117 aa1.81□□□□□ -2.12
MCF2-208ENST00000519895 SYCNQ0VAF6 134 aa1.81□□□□□ -2.12
MCF2-208ENST00000519895 Q6ZUT4 128 aa1.81□□□□□ -2.12
MCF2-208ENST00000519895 CARD19Q96LW7 228 aa1.81□□□□□ -2.12
MCF2-208ENST00000519895 MUC5BQ9HC84 5762 aaPredicted RBP1.8□□□□□ -2.12
MCF2-208ENST00000519895 IGKV2D-24A0A075B6R9 120 aa1.8□□□□□ -2.12
MCF2-208ENST00000519895 NDUFC2O95298 119 aa1.8□□□□□ -2.12
MCF2-208ENST00000519895 CHAC1Q9BUX1 264 aa1.8□□□□□ -2.12
MCF2-208ENST00000519895 IGKV2D-29A0A075B6S2 120 aaPredicted RBP1.8□□□□□ -2.12
MCF2-208ENST00000519895 TMEM223A0PJW6 202 aa1.8□□□□□ -2.12
MCF2-208ENST00000519895 IGKV2-29A2NJV5 120 aaPredicted RBP1.8□□□□□ -2.12
MCF2-208ENST00000519895 NDUFC2-KCTD14E9PQ53 114 aa1.8□□□□□ -2.12
MCF2-208ENST00000519895 LEPROTO15243 131 aa1.8□□□□□ -2.12
MCF2-208ENST00000519895 KRTAP10-4P60372 401 aaPredicted RBP1.8□□□□□ -2.12
MCF2-208ENST00000519895 IFI27L1Q96BM0 104 aa1.8□□□□□ -2.12
MCF2-208ENST00000519895 TRBV7-6A0A0J9YX20 115 aa1.79□□□□□ -2.12
MCF2-208ENST00000519895 A0A0J9YXV3 536 aa1.79□□□□□ -2.12
MCF2-208ENST00000519895 A0A1B0GWB2 263 aa1.79□□□□□ -2.12
MCF2-208ENST00000519895 SMIM1B2RUZ4 78 aa1.79□□□□□ -2.12
MCF2-208ENST00000519895 DLEU1O43261 78 aa1.79□□□□□ -2.12
MCF2-208ENST00000519895 HERVK_113P61574 105 aa1.79□□□□□ -2.12
MCF2-208ENST00000519895 C10orf25Q5T742 122 aa1.79□□□□□ -2.12
MCF2-208ENST00000519895 SPANXB1Q9NS25 103 aaPredicted RBP1.79□□□□□ -2.12
MCF2-208ENST00000519895 SMKR1H3BMG3 65 aa1.79□□□□□ -2.12
MCF2-208ENST00000519895 ZNF22P17026 224 aaPredicted RBP1.79□□□□□ -2.12
MCF2-208ENST00000519895 SPINK6Q6UWN8 80 aa1.79□□□□□ -2.12
MCF2-208ENST00000519895 NOTCH2NLQ7Z3S9 236 aa1.79□□□□□ -2.12
MCF2-208ENST00000519895 COX7B2Q8TF08 81 aa1.79□□□□□ -2.12
MCF2-208ENST00000519895 ZNF625Q96I27 306 aaPredicted RBP1.79□□□□□ -2.12
MCF2-208ENST00000519895 FCGBPQ9Y6R7 5405 aaPredicted RBP1.79□□□□□ -2.12
MCF2-208ENST00000519895 IGKV2D-26A0A0A0MRZ7 120 aa1.79□□□□□ -2.12
MCF2-208ENST00000519895 E9PLD3 99 aa1.79□□□□□ -2.12
MCF2-208ENST00000519895 LEPROTL1O95214 131 aa1.79□□□□□ -2.12
MCF2-208ENST00000519895 TRGC2P03986 189 aa1.79□□□□□ -2.12
MCF2-208ENST00000519895 MT1HL1P0DM35 61 aa1.79□□□□□ -2.12
MCF2-208ENST00000519895 IFITM1P13164 125 aa1.79□□□□□ -2.12
MCF2-208ENST00000519895 KRTAP10-1P60331 282 aa1.79□□□□□ -2.12
MCF2-208ENST00000519895 KRTAP10-2P60368 255 aa1.79□□□□□ -2.12
MCF2-208ENST00000519895 SPAG11BQ08648 103 aa1.79□□□□□ -2.12
MCF2-208ENST00000519895 DPM2O94777 84 aa1.78□□□□□ -2.12
MCF2-208ENST00000519895 PMCHL1Q16048 86 aa1.78□□□□□ -2.12
MCF2-208ENST00000519895 MTURNQ8N3F0 131 aa1.78□□□□□ -2.12
MCF2-208ENST00000519895 C7orf33Q8WU49 177 aa1.78□□□□□ -2.12
MCF2-208ENST00000519895 PRAC1Q96KF2 57 aa1.78□□□□□ -2.12
MCF2-208ENST00000519895 MUC21A0A0G2JKD1 596 aa1.78□□□□□ -2.12
MCF2-208ENST00000519895 MUC21A0A140T8X8 626 aa1.78□□□□□ -2.12
MCF2-208ENST00000519895 MYMXA0A1B0GTQ4 84 aa1.78□□□□□ -2.12
MCF2-208ENST00000519895 M0R2N4 97 aa1.78□□□□□ -2.12
MCF2-208ENST00000519895 HIST1H2BKO60814 126 aa1.78□□□□□ -2.12
MCF2-208ENST00000519895 HIST1H2BJP06899 126 aa1.78□□□□□ -2.12
MCF2-208ENST00000519895 HIST1H2BOP23527 126 aa1.78□□□□□ -2.12
MCF2-208ENST00000519895 HIST1H2BBP33778 126 aa1.78□□□□□ -2.12
MCF2-208ENST00000519895 HIST1H2BDP58876 126 aa1.78□□□□□ -2.12
MCF2-208ENST00000519895 HIST1H2BCP62807 126 aa1.78□□□□□ -2.12
MCF2-208ENST00000519895 RPL39P62891 51 aaKnown RBP1.78□□□□□ -2.12
MCF2-208ENST00000519895 RPL18AQ02543 176 aaKnown RBP1.78□□□□□ -2.12
MCF2-208ENST00000519895 HIST2H2BEQ16778 126 aa1.78□□□□□ -2.12
MCF2-208ENST00000519895 C4orf26Q17RF5 130 aa1.78□□□□□ -2.12
MCF2-208ENST00000519895 FAM229BQ4G0N7 80 aa1.78□□□□□ -2.12
MCF2-208ENST00000519895 HIST2H2BFQ5QNW6 126 aaPredicted RBP1.78□□□□□ -2.12
MCF2-208ENST00000519895 FAM19A5Q7Z5A7 132 aaPredicted RBP1.78□□□□□ -2.12
MCF2-208ENST00000519895 ORAOV1Q8WV07 137 aa1.78□□□□□ -2.12
MCF2-208ENST00000519895 HIST1H2BHQ93079 126 aa1.78□□□□□ -2.12
MCF2-208ENST00000519895 HIST1H2BNQ99877 126 aa1.78□□□□□ -2.12
MCF2-208ENST00000519895 HIST1H2BMQ99879 126 aa1.78□□□□□ -2.12
MCF2-208ENST00000519895 PMCHL2Q9BQD1 86 aa1.78□□□□□ -2.12
MCF2-208ENST00000519895 SLPIP03973 132 aa1.78□□□□□ -2.13
MCF2-208ENST00000519895 RPL37AP61513 92 aaKnown RBP1.78□□□□□ -2.13
MCF2-208ENST00000519895 RPS29P62273 56 aaKnown RBP1.78□□□□□ -2.13
MCF2-208ENST00000519895 Q6ZRP5 223 aa1.78□□□□□ -2.13
MCF2-208ENST00000519895 CAMK2N2Q96S95 79 aa1.78□□□□□ -2.13
MCF2-208ENST00000519895 SPANXDQ9BXN6 97 aa1.78□□□□□ -2.13
MCF2-208ENST00000519895 SPANXCQ9NY87 97 aa1.78□□□□□ -2.13
MCF2-208ENST00000519895 IGLV1-50A0A075B6I6 118 aa1.77□□□□□ -2.13
MCF2-208ENST00000519895 H3BQ85 93 aa1.77□□□□□ -2.13
MCF2-208ENST00000519895 SYS1-DBNDD2H3BUS1 97 aa1.77□□□□□ -2.13
MCF2-208ENST00000519895 LINC01547P58512 204 aaPredicted RBP1.77□□□□□ -2.13
MCF2-208ENST00000519895 WFDC2Q14508 124 aa1.77□□□□□ -2.13
MCF2-208ENST00000519895 REG3GQ6UW15 175 aa1.77□□□□□ -2.13
MCF2-208ENST00000519895 C6orf48Q9UBA6 75 aa1.77□□□□□ -2.13
MCF2-208ENST00000519895 SCO1O75880 301 aa1.77□□□□□ -2.13
MCF2-208ENST00000519895 SERF1AO75920 110 aa1.77□□□□□ -2.13
Retrieved 100 of 20,778 RNA–protein pairs in 6.8 ms