RNA–Protein interactions for RNA: ENST00000516330.1

SCARNA18.1-201, small Cajal body-specific RNA 18, humanhuman

BASIC

Gene SCARNA18, Length 83 nt, Biotype scaRNA, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARNA18.1-201ENST00000516330 S100A12P80511 92 aa3.6□□□□□ -1.83
SCARNA18.1-201ENST00000516330 FAM229BQ4G0N7 80 aa3.6□□□□□ -1.83
SCARNA18.1-201ENST00000516330 MEIG1Q5JSS6 88 aa3.6□□□□□ -1.83
SCARNA18.1-201ENST00000516330 PLEKHB2Q96CS7 222 aa3.6□□□□□ -1.83
SCARNA18.1-201ENST00000516330 IGKV2-28A0A075B6P5 120 aa3.59□□□□□ -1.83
SCARNA18.1-201ENST00000516330 COLCA2A8K830 154 aa3.59□□□□□ -1.83
SCARNA18.1-201ENST00000516330 PRYO14603 147 aa3.59□□□□□ -1.83
SCARNA18.1-201ENST00000516330 ATP6V1G1O75348 118 aa3.59□□□□□ -1.83
SCARNA18.1-201ENST00000516330 DPM2O94777 84 aa3.59□□□□□ -1.83
SCARNA18.1-201ENST00000516330 IGKV2D-28P01615 120 aa3.59□□□□□ -1.83
SCARNA18.1-201ENST00000516330 FAM19A2Q8N3H0 131 aa3.59□□□□□ -1.83
SCARNA18.1-201ENST00000516330 PRR26Q8N8Z3 221 aa3.59□□□□□ -1.83
SCARNA18.1-201ENST00000516330 TMEM126AQ9H061 195 aa3.59□□□□□ -1.83
SCARNA18.1-201ENST00000516330 NDUFA12Q9UI09 145 aa3.59□□□□□ -1.83
SCARNA18.1-201ENST00000516330 LOC107984156A0A0G2JMH3 177 aa3.58□□□□□ -1.84
SCARNA18.1-201ENST00000516330 TRBV10-2A0A0K0K1G8 114 aa3.58□□□□□ -1.84
SCARNA18.1-201ENST00000516330 M0R378 163 aa3.58□□□□□ -1.84
SCARNA18.1-201ENST00000516330 LEPROTO15243 131 aa3.58□□□□□ -1.84
SCARNA18.1-201ENST00000516330 IGKCP01834 107 aa3.58□□□□□ -1.84
SCARNA18.1-201ENST00000516330 CRYGAP11844 174 aa3.58□□□□□ -1.84
SCARNA18.1-201ENST00000516330 AKR1D1P51857 326 aa3.58□□□□□ -1.84
SCARNA18.1-201ENST00000516330 LINC00158P58513 81 aa3.58□□□□□ -1.84
SCARNA18.1-201ENST00000516330 ARL17AQ8IVW1 177 aa3.58□□□□□ -1.84
SCARNA18.1-201ENST00000516330 MIEN1Q9BRT3 115 aa3.58□□□□□ -1.84
SCARNA18.1-201ENST00000516330 CBY1Q9Y3M2 126 aa3.58□□□□□ -1.84
SCARNA18.1-201ENST00000516330 ZNF706Q9Y5V0 76 aaPredicted RBP3.58□□□□□ -1.84
SCARNA18.1-201ENST00000516330 GAGE10A6NGK3 116 aa3.57□□□□□ -1.84
SCARNA18.1-201ENST00000516330 RPL37AP8A6NKH3 93 aa3.57□□□□□ -1.84
SCARNA18.1-201ENST00000516330 E9PLD3 99 aa3.57□□□□□ -1.84
SCARNA18.1-201ENST00000516330 H0Y8G0 127 aa3.57□□□□□ -1.84
SCARNA18.1-201ENST00000516330 J3QQQ9 107 aa3.57□□□□□ -1.84
SCARNA18.1-201ENST00000516330 NDUFC2O95298 119 aa3.57□□□□□ -1.84
SCARNA18.1-201ENST00000516330 SPRR1AP35321 89 aa3.57□□□□□ -1.84
SCARNA18.1-201ENST00000516330 MIR7-3HGQ8N6C7 128 aa3.57□□□□□ -1.84
SCARNA18.1-201ENST00000516330 LINC00337Q8N6G1 96 aa3.57□□□□□ -1.84
SCARNA18.1-201ENST00000516330 SPANXB1Q9NS25 103 aaPredicted RBP3.57□□□□□ -1.84
SCARNA18.1-201ENST00000516330 HIST1H2BKO60814 126 aa3.56□□□□□ -1.84
SCARNA18.1-201ENST00000516330 HIST1H2BJP06899 126 aa3.56□□□□□ -1.84
SCARNA18.1-201ENST00000516330 SMIM13P0DJ93 91 aa3.56□□□□□ -1.84
SCARNA18.1-201ENST00000516330 LGALS3P17931 250 aaKnown RBP3.56□□□□□ -1.84
SCARNA18.1-201ENST00000516330 HIST1H2BOP23527 126 aa3.56□□□□□ -1.84
SCARNA18.1-201ENST00000516330 HIST1H2BBP33778 126 aa3.56□□□□□ -1.84
SCARNA18.1-201ENST00000516330 HIST1H2BDP58876 126 aa3.56□□□□□ -1.84
SCARNA18.1-201ENST00000516330 HIST1H2BCP62807 126 aa3.56□□□□□ -1.84
SCARNA18.1-201ENST00000516330 PRLHP81277 87 aa3.56□□□□□ -1.84
SCARNA18.1-201ENST00000516330 HIST2H2BEQ16778 126 aa3.56□□□□□ -1.84
SCARNA18.1-201ENST00000516330 HIST2H2BFQ5QNW6 126 aaPredicted RBP3.56□□□□□ -1.84
SCARNA18.1-201ENST00000516330 FAM19A1Q7Z5A9 133 aa3.56□□□□□ -1.84
SCARNA18.1-201ENST00000516330 BOD1L2Q8IYS8 172 aa3.56□□□□□ -1.84
SCARNA18.1-201ENST00000516330 SLC7A5P1Q8MH63 180 aa3.56□□□□□ -1.84
SCARNA18.1-201ENST00000516330 TYMSOSQ8TAI1 123 aa3.56□□□□□ -1.84
SCARNA18.1-201ENST00000516330 HIST1H2BHQ93079 126 aa3.56□□□□□ -1.84
SCARNA18.1-201ENST00000516330 HIST1H2BNQ99877 126 aa3.56□□□□□ -1.84
SCARNA18.1-201ENST00000516330 HIST1H2BMQ99879 126 aa3.56□□□□□ -1.84
SCARNA18.1-201ENST00000516330 LRP2P98164 4655 aa3.56□□□□□ -1.84
SCARNA18.1-201ENST00000516330 A0A087X002 238 aa3.55□□□□□ -1.84
SCARNA18.1-201ENST00000516330 SYS1-DBNDD2H3BUS1 97 aa3.55□□□□□ -1.84
SCARNA18.1-201ENST00000516330 TSPEAR-AS2P59090 65 aa3.55□□□□□ -1.84
SCARNA18.1-201ENST00000516330 COA6Q5JTJ3 125 aaKnown RBP3.55□□□□□ -1.84
SCARNA18.1-201ENST00000516330 PET117Q6UWS5 81 aa3.55□□□□□ -1.84
SCARNA18.1-201ENST00000516330 Q8NDZ9 215 aa3.55□□□□□ -1.84
SCARNA18.1-201ENST00000516330 KCNQ1DNQ9H478 68 aa3.55□□□□□ -1.84
SCARNA18.1-201ENST00000516330 C20orf202A1L168 122 aa3.54□□□□□ -1.84
SCARNA18.1-201ENST00000516330 TMEM238C9JI98 176 aa3.54□□□□□ -1.84
SCARNA18.1-201ENST00000516330 KRTAP4-16G5E9R7 235 aaPredicted RBP3.54□□□□□ -1.84
SCARNA18.1-201ENST00000516330 TIMM17BO60830 172 aa3.54□□□□□ -1.84
SCARNA18.1-201ENST00000516330 FABP4P15090 132 aa3.54□□□□□ -1.84
SCARNA18.1-201ENST00000516330 LINC01545Q5VT33 79 aa3.54□□□□□ -1.84
SCARNA18.1-201ENST00000516330 PPDPFQ9H3Y8 114 aa3.54□□□□□ -1.84
SCARNA18.1-201ENST00000516330 A0A0U1RRA0 63 aa3.53□□□□□ -1.84
SCARNA18.1-201ENST00000516330 ETDCA0A1B0GVM5 59 aa3.53□□□□□ -1.84
SCARNA18.1-201ENST00000516330 C5orf52A6NGY3 159 aa3.53□□□□□ -1.84
SCARNA18.1-201ENST00000516330 NCR3O14931 201 aa3.53□□□□□ -1.84
SCARNA18.1-201ENST00000516330 SCO1O75880 301 aa3.53□□□□□ -1.84
SCARNA18.1-201ENST00000516330 DDTP30046 118 aa3.53□□□□□ -1.84
SCARNA18.1-201ENST00000516330 JOSD1Q15040 202 aaPredicted RBP3.53□□□□□ -1.84
SCARNA18.1-201ENST00000516330 SPAG11AQ6PDA7 123 aa3.53□□□□□ -1.84
SCARNA18.1-201ENST00000516330 LINC00304Q8N9R0 145 aa3.53□□□□□ -1.84
SCARNA18.1-201ENST00000516330 COPS9Q8WXC6 57 aa3.53□□□□□ -1.84
SCARNA18.1-201ENST00000516330 HIGD2AQ9BW72 106 aa3.53□□□□□ -1.84
SCARNA18.1-201ENST00000516330 SPANXCQ9NY87 97 aa3.53□□□□□ -1.84
SCARNA18.1-201ENST00000516330 A0A0J9YXY3 114 aa3.52□□□□□ -1.85
SCARNA18.1-201ENST00000516330 TRBV10-3A0A0K0K1G6 114 aa3.52□□□□□ -1.85
SCARNA18.1-201ENST00000516330 IGLV6-57P01721 117 aa3.52□□□□□ -1.85
SCARNA18.1-201ENST00000516330 KRTAP13-2Q52LG2 175 aa3.52□□□□□ -1.85
SCARNA18.1-201ENST00000516330 Q6ZRX8 168 aa3.52□□□□□ -1.85
SCARNA18.1-201ENST00000516330 SPRR4Q96PI1 79 aa3.52□□□□□ -1.85
SCARNA18.1-201ENST00000516330 PMCHL2Q9BQD1 86 aa3.52□□□□□ -1.85
SCARNA18.1-201ENST00000516330 TRAV23DV6A0A075B6W5 121 aa3.51□□□□□ -1.85
SCARNA18.1-201ENST00000516330 RPS29P62273 56 aaKnown RBP3.51□□□□□ -1.85
SCARNA18.1-201ENST00000516330 SNRPEP62304 92 aaKnown RBP3.51□□□□□ -1.85
SCARNA18.1-201ENST00000516330 LINC00483Q53H64 154 aa3.51□□□□□ -1.85
SCARNA18.1-201ENST00000516330 S100A7L2Q5SY68 101 aa3.51□□□□□ -1.85
SCARNA18.1-201ENST00000516330 ZNF815PA8K554 130 aa3.5□□□□□ -1.85
SCARNA18.1-201ENST00000516330 B5MCH6 92 aa3.5□□□□□ -1.85
SCARNA18.1-201ENST00000516330 C3orf79P0CE67 100 aa3.5□□□□□ -1.85
SCARNA18.1-201ENST00000516330 HINT1P49773 126 aaPredicted RBP3.5□□□□□ -1.85
SCARNA18.1-201ENST00000516330 TPRXLQ17RH7 258 aa3.5□□□□□ -1.85
SCARNA18.1-201ENST00000516330 Q6ZVH6 145 aa3.5□□□□□ -1.85
SCARNA18.1-201ENST00000516330 DAND5Q8N907 189 aa3.5□□□□□ -1.85
Retrieved 100 of 20,778 RNA–protein pairs in 89.7 ms