RNA–Protein interactions for RNA: ENST00000515459.5

LMNA-223, Transcript of lamin A/C, humanhuman

TSL 5

Gene LMNA, Length 757 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMNA-223ENST00000515459 DAND5Q8N907 189 aa8.87□□□□□ -0.99
LMNA-223ENST00000515459 Q8NBF4 154 aa8.87□□□□□ -0.99
LMNA-223ENST00000515459 Q8NDZ9 215 aa8.86□□□□□ -0.99
LMNA-223ENST00000515459 LINC01546A6NGU7 62 aa8.85□□□□□ -0.99
LMNA-223ENST00000515459 SPINK1P00995 79 aa8.85□□□□□ -0.99
LMNA-223ENST00000515459 UQCC3Q6UW78 93 aa8.85□□□□□ -0.99
LMNA-223ENST00000515459 ZNF625Q96I27 306 aaPredicted RBP8.85□□□□□ -0.99
LMNA-223ENST00000515459 IGLC3P0DOY3 106 aa8.84□□□□□ -0.99
LMNA-223ENST00000515459 FSIP2Q5CZC0 6907 aa8.83□□□□□ -1
LMNA-223ENST00000515459 NDUFA12Q9UI09 145 aa8.82□□□□□ -1
LMNA-223ENST00000515459 ZNF22P17026 224 aaPredicted RBP8.81□□□□□ -1
LMNA-223ENST00000515459 SFTA2Q6UW10 78 aa8.81□□□□□ -1
LMNA-223ENST00000515459 NDUFA6P56556 154 aa8.8□□□□□ -1
LMNA-223ENST00000515459 SMCO4Q9NRQ5 59 aa8.8□□□□□ -1
LMNA-223ENST00000515459 FA2HQ7L5A8 372 aa8.79□□□□□ -1
LMNA-223ENST00000515459 COMMD7Q86VX2 200 aa8.79□□□□□ -1
LMNA-223ENST00000515459 FAM19A2Q8N3H0 131 aa8.79□□□□□ -1
LMNA-223ENST00000515459 PRYO14603 147 aa8.78□□□□□ -1
LMNA-223ENST00000515459 LINC00158P58513 81 aa8.78□□□□□ -1
LMNA-223ENST00000515459 SMCR5Q8TEV8 140 aa8.78□□□□□ -1
LMNA-223ENST00000515459 TRAV9-1A0A075B6T8 112 aa8.77□□□□□ -1.01
LMNA-223ENST00000515459 RPS29P62273 56 aaKnown RBP8.77□□□□□ -1.01
LMNA-223ENST00000515459 TMEM218A2RU14 115 aa8.76□□□□□ -1.01
LMNA-223ENST00000515459 LINC00483Q53H64 154 aa8.76□□□□□ -1.01
LMNA-223ENST00000515459 Q8N377 158 aa8.76□□□□□ -1.01
LMNA-223ENST00000515459 SPRR1AP35321 89 aa8.75□□□□□ -1.01
LMNA-223ENST00000515459 XP32Q5T750 250 aa8.75□□□□□ -1.01
LMNA-223ENST00000515459 LCE2CQ5TA81 110 aa8.75□□□□□ -1.01
LMNA-223ENST00000515459 SEC11CQ9BY50 192 aa8.75□□□□□ -1.01
LMNA-223ENST00000515459 A0A0U1RRA0 63 aa8.74□□□□□ -1.01
LMNA-223ENST00000515459 TMEM170BQ5T4T1 132 aa8.74□□□□□ -1.01
LMNA-223ENST00000515459 GAGE2AQ6NT46 116 aa8.74□□□□□ -1.01
LMNA-223ENST00000515459 KCNQ1DNQ9H478 68 aa8.74□□□□□ -1.01
LMNA-223ENST00000515459 A0A096LNJ9 63 aa8.73□□□□□ -1.01
LMNA-223ENST00000515459 ETDCA0A1B0GVM5 59 aa8.73□□□□□ -1.01
LMNA-223ENST00000515459 C11orf86A6NJI1 115 aa8.73□□□□□ -1.01
LMNA-223ENST00000515459 KRTAP4-16G5E9R7 235 aaPredicted RBP8.73□□□□□ -1.01
LMNA-223ENST00000515459 SLC25A20O43772 301 aa8.73□□□□□ -1.01
LMNA-223ENST00000515459 MOBPQ13875 183 aa8.73□□□□□ -1.01
LMNA-223ENST00000515459 SSBP3-AS1Q7Z2R9 100 aa8.73□□□□□ -1.01
LMNA-223ENST00000515459 IGLV9-49A0A0B4J1Y8 123 aa8.72□□□□□ -1.01
LMNA-223ENST00000515459 BOD1L2Q8IYS8 172 aa8.72□□□□□ -1.01
LMNA-223ENST00000515459 NCR3O14931 201 aa8.71□□□□□ -1.02
LMNA-223ENST00000515459 ATP6V1G1O75348 118 aa8.71□□□□□ -1.02
LMNA-223ENST00000515459 S100PP25815 95 aa8.71□□□□□ -1.02
LMNA-223ENST00000515459 NDUFA5Q16718 116 aa8.71□□□□□ -1.02
LMNA-223ENST00000515459 COX19Q49B96 90 aa8.71□□□□□ -1.02
LMNA-223ENST00000515459 FABP9Q0Z7S8 132 aa8.7□□□□□ -1.02
LMNA-223ENST00000515459 BAGE3Q86Y29 109 aa8.7□□□□□ -1.02
LMNA-223ENST00000515459 HBDP02042 147 aa8.69□□□□□ -1.02
LMNA-223ENST00000515459 TRBV10-3A0A0K0K1G6 114 aa8.68□□□□□ -1.02
LMNA-223ENST00000515459 CFC1BP0CG36 223 aa8.68□□□□□ -1.02
LMNA-223ENST00000515459 SMIM13P0DJ93 91 aa8.68□□□□□ -1.02
LMNA-223ENST00000515459 MT1HP80294 61 aa8.68□□□□□ -1.02
LMNA-223ENST00000515459 S100A12P80511 92 aa8.68□□□□□ -1.02
LMNA-223ENST00000515459 KRTAP19-2Q3LHN2 52 aa8.68□□□□□ -1.02
LMNA-223ENST00000515459 C10orf91Q5T1B1 145 aa8.68□□□□□ -1.02
LMNA-223ENST00000515459 MEIG1Q5JSS6 88 aa8.67□□□□□ -1.02
LMNA-223ENST00000515459 MIR7-3HGQ8N6C7 128 aa8.67□□□□□ -1.02
LMNA-223ENST00000515459 B5MCH6 92 aa8.66□□□□□ -1.02
LMNA-223ENST00000515459 ERC2-IT1O76042 136 aa8.66□□□□□ -1.02
LMNA-223ENST00000515459 LINC00614P0C842 121 aa8.66□□□□□ -1.02
LMNA-223ENST00000515459 PMCHL1Q16048 86 aa8.66□□□□□ -1.02
LMNA-223ENST00000515459 URB1-AS1Q96HZ7 61 aa8.66□□□□□ -1.02
LMNA-223ENST00000515459 TMEM223A0PJW6 202 aa8.65□□□□□ -1.02
LMNA-223ENST00000515459 RHEBQ15382 184 aa8.65□□□□□ -1.02
LMNA-223ENST00000515459 SVBPQ8N300 66 aa8.65□□□□□ -1.02
LMNA-223ENST00000515459 CHTOPQ9Y3Y2 248 aaKnown RBP8.65□□□□□ -1.02
LMNA-223ENST00000515459 SNAPINO95295 136 aa8.64□□□□□ -1.03
LMNA-223ENST00000515459 C18orf32Q8TCD1 76 aa8.64□□□□□ -1.03
LMNA-223ENST00000515459 APOC3P02656 99 aa8.63□□□□□ -1.03
LMNA-223ENST00000515459 LINC00587B1AMM8 73 aa8.62□□□□□ -1.03
LMNA-223ENST00000515459 HERV-K104P63124 156 aa8.62□□□□□ -1.03
LMNA-223ENST00000515459 C9orf153Q5TBE3 101 aa8.62□□□□□ -1.03
LMNA-223ENST00000515459 Q9BRP9 147 aa8.62□□□□□ -1.03
LMNA-223ENST00000515459 RPS10P5Q9NQ39 176 aa8.62□□□□□ -1.03
LMNA-223ENST00000515459 IGLV8-61A0A075B6I0 122 aa8.61□□□□□ -1.03
LMNA-223ENST00000515459 PCOTHQ58A44 107 aa8.61□□□□□ -1.03
LMNA-223ENST00000515459 Q6ZRX8 168 aa8.61□□□□□ -1.03
LMNA-223ENST00000515459 DDTP30046 118 aa8.6□□□□□ -1.03
LMNA-223ENST00000515459 SLC7A5P1Q8MH63 180 aa8.6□□□□□ -1.03
LMNA-223ENST00000515459 MAP1LC3CQ9BXW4 147 aa8.6□□□□□ -1.03
LMNA-223ENST00000515459 LORP23490 312 aaPredicted RBP8.59□□□□□ -1.03
LMNA-223ENST00000515459 TRAPPC1Q9Y5R8 145 aa8.58□□□□□ -1.04
LMNA-223ENST00000515459 TRAV12-1A0A0B4J245 112 aa8.57□□□□□ -1.04
LMNA-223ENST00000515459 TRBV10-2A0A0K0K1G8 114 aa8.57□□□□□ -1.04
LMNA-223ENST00000515459 KRTAP10-6P60371 365 aaPredicted RBP8.57□□□□□ -1.04
LMNA-223ENST00000515459 LOC107984156A0A0G2JMH3 177 aa8.56□□□□□ -1.04
LMNA-223ENST00000515459 MYMXA0A1B0GTQ4 84 aa8.56□□□□□ -1.04
LMNA-223ENST00000515459 ARL17AQ8IVW1 177 aa8.56□□□□□ -1.04
LMNA-223ENST00000515459 JOSD1Q15040 202 aaPredicted RBP8.55□□□□□ -1.04
LMNA-223ENST00000515459 C9orf92A6NGG3 77 aa8.54□□□□□ -1.04
LMNA-223ENST00000515459 IFI27L1Q96BM0 104 aa8.54□□□□□ -1.04
LMNA-223ENST00000515459 LIMD2Q9BT23 127 aa8.54□□□□□ -1.04
LMNA-223ENST00000515459 S100A7L2Q5SY68 101 aa8.53□□□□□ -1.04
LMNA-223ENST00000515459 SPANXB1Q9NS25 103 aaPredicted RBP8.53□□□□□ -1.04
LMNA-223ENST00000515459 M0R2T5 61 aa8.52□□□□□ -1.05
LMNA-223ENST00000515459 IGLV6-57P01721 117 aa8.52□□□□□ -1.05
LMNA-223ENST00000515459 TRAV23DV6A0A075B6W5 121 aa8.51□□□□□ -1.05
LMNA-223ENST00000515459 ST20-AS1Q8NBB2 130 aa8.51□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 247.4 ms