RNA–Protein interactions for RNA: ENST00000514493.5

SSBP2-218, Transcript of single stranded DNA binding protein 2, humanhuman

TSL 1 (best) BASIC

Gene SSBP2, Length 1,790 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP2-218ENST00000514493 FABP2P12104 132 aa12.87□□□□□ -0.35
SSBP2-218ENST00000514493 CARD19Q96LW7 228 aa12.87□□□□□ -0.35
SSBP2-218ENST00000514493 SLPIP03973 132 aa12.86□□□□□ -0.35
SSBP2-218ENST00000514493 RPL13AP40429 203 aaKnown RBP12.84□□□□□ -0.35
SSBP2-218ENST00000514493 H7C2G1 150 aa12.84□□□□□ -0.35
SSBP2-218ENST00000514493 RNF151Q2KHN1 245 aa12.84□□□□□ -0.35
SSBP2-218ENST00000514493 Q1RN00 199 aa12.83□□□□□ -0.36
SSBP2-218ENST00000514493 IGKV2-28A0A075B6P5 120 aa12.82□□□□□ -0.36
SSBP2-218ENST00000514493 TRAV13-2A0A0B4J235 113 aa12.82□□□□□ -0.36
SSBP2-218ENST00000514493 IGKV2D-28P01615 120 aa12.82□□□□□ -0.36
SSBP2-218ENST00000514493 CNBPP62633 177 aaKnown RBP12.82□□□□□ -0.36
SSBP2-218ENST00000514493 FRAS1Q86XX4 4008 aa12.82□□□□□ -0.36
SSBP2-218ENST00000514493 NDUFC2-KCTD14E9PQ53 114 aa12.81□□□□□ -0.36
SSBP2-218ENST00000514493 NDUFC2O95298 119 aa12.81□□□□□ -0.36
SSBP2-218ENST00000514493 SPCS1Q9Y6A9 102 aa12.81□□□□□ -0.36
SSBP2-218ENST00000514493 DNAH17Q9UFH2 4485 aa12.81□□□□□ -0.36
SSBP2-218ENST00000514493 A0A087WTM6 91 aa12.81□□□□□ -0.36
SSBP2-218ENST00000514493 K7EP34 96 aa12.8□□□□□ -0.36
SSBP2-218ENST00000514493 UBE2V1Q13404 147 aa12.8□□□□□ -0.36
SSBP2-218ENST00000514493 LYRM7Q5U5X0 104 aa12.8□□□□□ -0.36
SSBP2-218ENST00000514493 Q8N814 137 aa12.8□□□□□ -0.36
SSBP2-218ENST00000514493 GAGE10A6NGK3 116 aa12.79□□□□□ -0.36
SSBP2-218ENST00000514493 GTF2H5Q6ZYL4 71 aa12.79□□□□□ -0.36
SSBP2-218ENST00000514493 LINC00337Q8N6G1 96 aa12.79□□□□□ -0.36
SSBP2-218ENST00000514493 IGLV2-33A0A075B6J2 118 aaPredicted RBP12.79□□□□□ -0.36
SSBP2-218ENST00000514493 PSMB2P49721 201 aa12.79□□□□□ -0.36
SSBP2-218ENST00000514493 TLX1NBP0CAT3 122 aa12.77□□□□□ -0.36
SSBP2-218ENST00000514493 XAGE1AQ9HD64 81 aa12.76□□□□□ -0.37
SSBP2-218ENST00000514493 RTL8CO15255 209 aa12.76□□□□□ -0.37
SSBP2-218ENST00000514493 TRIAP1O43715 76 aa12.76□□□□□ -0.37
SSBP2-218ENST00000514493 Q6ZRP5 223 aa12.76□□□□□ -0.37
SSBP2-218ENST00000514493 Q8NDZ9 215 aa12.75□□□□□ -0.37
SSBP2-218ENST00000514493 SCGB1C2P0DMR2 95 aa12.74□□□□□ -0.37
SSBP2-218ENST00000514493 RPL18AQ02543 176 aaKnown RBP12.73□□□□□ -0.37
SSBP2-218ENST00000514493 GAGE2EQ4V326 116 aa12.73□□□□□ -0.37
SSBP2-218ENST00000514493 GAGE2DQ9UEU5 116 aa12.73□□□□□ -0.37
SSBP2-218ENST00000514493 LOC107984640A0A0U1RRK4 108 aa12.72□□□□□ -0.37
SSBP2-218ENST00000514493 PRR3P79522 188 aaKnown RBP12.72□□□□□ -0.37
SSBP2-218ENST00000514493 TNP2Q05952 138 aa12.72□□□□□ -0.37
SSBP2-218ENST00000514493 COX6CP09669 75 aa12.71□□□□□ -0.37
SSBP2-218ENST00000514493 OR13C6PQ8NH95 151 aa12.71□□□□□ -0.37
SSBP2-218ENST00000514493 HECTD4Q9Y4D8 3996 aa12.71□□□□□ -0.37
SSBP2-218ENST00000514493 TRBV20-1A0A075B6N2 111 aa12.71□□□□□ -0.38
SSBP2-218ENST00000514493 NCR3O14931 201 aa12.71□□□□□ -0.38
SSBP2-218ENST00000514493 C9orf163Q8N9P6 203 aa12.7□□□□□ -0.38
SSBP2-218ENST00000514493 TRBV10-2A0A0K0K1G8 114 aa12.69□□□□□ -0.38
SSBP2-218ENST00000514493 RPL28P46779 137 aaKnown RBP12.69□□□□□ -0.38
SSBP2-218ENST00000514493 TCL1BO95988 128 aa12.69□□□□□ -0.38
SSBP2-218ENST00000514493 TMEM126AQ9H061 195 aa12.69□□□□□ -0.38
SSBP2-218ENST00000514493 C9orf129Q5T035 196 aaKnown RBP12.68□□□□□ -0.38
SSBP2-218ENST00000514493 FAT2Q9NYQ8 4349 aa12.67□□□□□ -0.38
SSBP2-218ENST00000514493 H3BMG7 143 aa12.67□□□□□ -0.38
SSBP2-218ENST00000514493 VPREB1P12018 145 aa12.67□□□□□ -0.38
SSBP2-218ENST00000514493 SMIM11BQ8TCY0 68 aa12.67□□□□□ -0.38
SSBP2-218ENST00000514493 PKIGQ9Y2B9 76 aa12.67□□□□□ -0.38
SSBP2-218ENST00000514493 GAGE2BQ13066 116 aa12.66□□□□□ -0.38
SSBP2-218ENST00000514493 S100A7L2Q5SY68 101 aa12.66□□□□□ -0.38
SSBP2-218ENST00000514493 C16orf90A8MZG2 172 aa12.64□□□□□ -0.39
SSBP2-218ENST00000514493 A0A096LNI7 61 aa12.64□□□□□ -0.39
SSBP2-218ENST00000514493 DNAH11Q96DT5 4516 aa12.63□□□□□ -0.39
SSBP2-218ENST00000514493 IGLV6-57P01721 117 aa12.63□□□□□ -0.39
SSBP2-218ENST00000514493 ATXN8Q156A1 80 aa12.63□□□□□ -0.39
SSBP2-218ENST00000514493 PLA2G2DQ9UNK4 145 aa12.62□□□□□ -0.39
SSBP2-218ENST00000514493 LINC01620Q4KN68 170 aa12.61□□□□□ -0.39
SSBP2-218ENST00000514493 CLEC2BQ92478 149 aa12.61□□□□□ -0.39
SSBP2-218ENST00000514493 IGLV5-52A0A0A0MRZ9 124 aa12.61□□□□□ -0.39
SSBP2-218ENST00000514493 M0R378 163 aa12.61□□□□□ -0.39
SSBP2-218ENST00000514493 SDIM1Q6ZPB5 146 aa12.61□□□□□ -0.39
SSBP2-218ENST00000514493 LST1O00453 97 aa12.6□□□□□ -0.39
SSBP2-218ENST00000514493 FUSP35637 526 aaKnown RBP eCLIP12.6□□□□□ -0.39
SSBP2-218ENST00000514493 IGKV2-24A0A0C4DH68 120 aa12.59□□□□□ -0.39
SSBP2-218ENST00000514493 TRBV10-3A0A0K0K1G6 114 aa12.58□□□□□ -0.39
SSBP2-218ENST00000514493 SERTAD4-AS1Q5TG53 156 aa12.58□□□□□ -0.39
SSBP2-218ENST00000514493 LINC00336Q6ZUF6 198 aa12.58□□□□□ -0.4
SSBP2-218ENST00000514493 NKAPP1Q8N9T2 125 aa12.58□□□□□ -0.4
SSBP2-218ENST00000514493 F8W1H4 67 aa12.57□□□□□ -0.4
SSBP2-218ENST00000514493 PRO0461Q9UI25 63 aa12.57□□□□□ -0.4
SSBP2-218ENST00000514493 IGLV5-37A0A075B6J1 123 aa12.56□□□□□ -0.4
SSBP2-218ENST00000514493 FAM168BA1KXE4 195 aa12.56□□□□□ -0.4
SSBP2-218ENST00000514493 H0YGX0 51 aa12.56□□□□□ -0.4
SSBP2-218ENST00000514493 DNAH5Q8TE73 4624 aa12.56□□□□□ -0.4
SSBP2-218ENST00000514493 CHTF8P0CG12 524 aa12.56□□□□□ -0.4
SSBP2-218ENST00000514493 KRTAP10-2P60368 255 aa12.56□□□□□ -0.4
SSBP2-218ENST00000514493 MTURNQ8N3F0 131 aa12.56□□□□□ -0.4
SSBP2-218ENST00000514493 EPPK1P58107 5090 aaKnown RBP12.55□□□□□ -0.4
SSBP2-218ENST00000514493 TRAV23DV6A0A075B6W5 121 aa12.55□□□□□ -0.4
SSBP2-218ENST00000514493 LINC00474Q9P2X8 69 aa12.55□□□□□ -0.4
SSBP2-218ENST00000514493 PKD1P98161 4303 aa12.55□□□□□ -0.4
SSBP2-218ENST00000514493 C6orf99Q4VX62 202 aa12.53□□□□□ -0.4
SSBP2-218ENST00000514493 KRTAP7-1Q8IUC3 87 aa12.53□□□□□ -0.4
SSBP2-218ENST00000514493 FAM218AQ96MZ4 157 aa12.53□□□□□ -0.4
SSBP2-218ENST00000514493 CBY1Q9Y3M2 126 aa12.53□□□□□ -0.4
SSBP2-218ENST00000514493 C9JAW5 83 aa12.53□□□□□ -0.4
SSBP2-218ENST00000514493 FAM19A5Q7Z5A7 132 aaPredicted RBP12.53□□□□□ -0.4
SSBP2-218ENST00000514493 C7orf33Q8WU49 177 aa12.52□□□□□ -0.41
SSBP2-218ENST00000514493 TRACP01848 142 aa12.51□□□□□ -0.41
SSBP2-218ENST00000514493 SPACA4Q8TDM5 124 aa12.51□□□□□ -0.41
SSBP2-218ENST00000514493 PANO1I0J062 215 aa12.51□□□□□ -0.41
SSBP2-218ENST00000514493 DIRC1Q969H9 104 aa12.5□□□□□ -0.41
SSBP2-218ENST00000514493 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP12.5□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 85.8 ms