RNA–Protein interactions for RNA: ENST00000513666.5

CAST-239, Transcript of calpastatin, humanhuman

TSL 2

Gene CAST, Length 1,539 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAST-239ENST00000513666 PPBPP02775 128 aa4.94□□□□□ -1.62
CAST-239ENST00000513666 FAM19A2Q8N3H0 131 aa4.94□□□□□ -1.62
CAST-239ENST00000513666 HIGD2AQ9BW72 106 aa4.94□□□□□ -1.62
CAST-239ENST00000513666 M0R2T5 61 aa4.93□□□□□ -1.62
CAST-239ENST00000513666 NPSP0C0P6 89 aa4.93□□□□□ -1.62
CAST-239ENST00000513666 SEC11AP67812 179 aa4.93□□□□□ -1.62
CAST-239ENST00000513666 CYSLTR1Q9Y271 337 aa4.93□□□□□ -1.62
CAST-239ENST00000513666 SMIM27A0A1W2PRY6 76 aa4.92□□□□□ -1.62
CAST-239ENST00000513666 SMIM1B2RUZ4 78 aa4.92□□□□□ -1.62
CAST-239ENST00000513666 F8W036 122 aa4.92□□□□□ -1.62
CAST-239ENST00000513666 RAB5BP61020 215 aa4.92□□□□□ -1.62
CAST-239ENST00000513666 RPS29P62273 56 aaKnown RBP4.92□□□□□ -1.62
CAST-239ENST00000513666 Q8N377 158 aa4.92□□□□□ -1.62
CAST-239ENST00000513666 GEMIN7Q9H840 131 aaKnown RBP4.92□□□□□ -1.62
CAST-239ENST00000513666 ZNF706Q9Y5V0 76 aaPredicted RBP4.92□□□□□ -1.62
CAST-239ENST00000513666 IGLV8-61A0A075B6I0 122 aa4.92□□□□□ -1.62
CAST-239ENST00000513666 C5orf52A6NGY3 159 aa4.92□□□□□ -1.62
CAST-239ENST00000513666 S100A8P05109 93 aa4.92□□□□□ -1.62
CAST-239ENST00000513666 VPREB1P12018 145 aa4.92□□□□□ -1.62
CAST-239ENST00000513666 ORMDL3Q8N138 153 aa4.92□□□□□ -1.62
CAST-239ENST00000513666 COX7B2Q8TF08 81 aa4.92□□□□□ -1.62
CAST-239ENST00000513666 SSPOA2VEC9 5147 aa4.91□□□□□ -1.62
CAST-239ENST00000513666 USH2AO75445 5202 aa4.91□□□□□ -1.62
CAST-239ENST00000513666 IGIPA6NJ69 53 aa4.91□□□□□ -1.62
CAST-239ENST00000513666 SLC25A20O43772 301 aa4.91□□□□□ -1.62
CAST-239ENST00000513666 PCOTHQ58A44 107 aa4.91□□□□□ -1.62
CAST-239ENST00000513666 PDZD11Q5EBL8 140 aa4.91□□□□□ -1.62
CAST-239ENST00000513666 TMEM136Q6ZRR5 245 aa4.91□□□□□ -1.62
CAST-239ENST00000513666 PRELID3AQ96N28 172 aa4.91□□□□□ -1.62
CAST-239ENST00000513666 FLGP20930 4061 aaPredicted RBP4.91□□□□□ -1.62
CAST-239ENST00000513666 A0A1B0GXF2 115 aa4.9□□□□□ -1.63
CAST-239ENST00000513666 MRPL54Q6P161 138 aaKnown RBP4.9□□□□□ -1.63
CAST-239ENST00000513666 LOC389332A0A1B0GUA5 103 aa4.89□□□□□ -1.63
CAST-239ENST00000513666 RAB14P61106 215 aa4.89□□□□□ -1.63
CAST-239ENST00000513666 PAPPA-AS1Q5QFB9 102 aa4.89□□□□□ -1.63
CAST-239ENST00000513666 ALKAL2Q6UX46 152 aa4.89□□□□□ -1.63
CAST-239ENST00000513666 SRP19P09132 144 aaKnown RBP4.88□□□□□ -1.63
CAST-239ENST00000513666 RPL23P62829 140 aaKnown RBP4.88□□□□□ -1.63
CAST-239ENST00000513666 RPL24P83731 157 aaKnown RBP4.88□□□□□ -1.63
CAST-239ENST00000513666 Q8N8P6 123 aa4.88□□□□□ -1.63
CAST-239ENST00000513666 MAP1LC3AQ9H492 121 aa4.88□□□□□ -1.63
CAST-239ENST00000513666 FCGBPQ9Y6R7 5405 aaPredicted RBP4.88□□□□□ -1.63
CAST-239ENST00000513666 PFN2P35080 140 aa4.87□□□□□ -1.63
CAST-239ENST00000513666 ORMDL2Q53FV1 153 aa4.87□□□□□ -1.63
CAST-239ENST00000513666 Q8NDZ9 215 aa4.87□□□□□ -1.63
CAST-239ENST00000513666 SND1-IT1Q9HBX3 110 aa4.87□□□□□ -1.63
CAST-239ENST00000513666 LAMTOR2Q9Y2Q5 125 aa4.87□□□□□ -1.63
CAST-239ENST00000513666 IGLV5-45A0A087WSX0 123 aa4.87□□□□□ -1.63
CAST-239ENST00000513666 ATP5LO75964 103 aa4.87□□□□□ -1.63
CAST-239ENST00000513666 PEA15Q15121 130 aa4.87□□□□□ -1.63
CAST-239ENST00000513666 ADIRFQ15847 76 aa4.87□□□□□ -1.63
CAST-239ENST00000513666 LINC00483Q53H64 154 aa4.87□□□□□ -1.63
CAST-239ENST00000513666 TIMM17AQ99595 171 aa4.87□□□□□ -1.63
CAST-239ENST00000513666 TINCRA0A1B0GVN0 87 aa4.86□□□□□ -1.63
CAST-239ENST00000513666 K7EMI3 77 aa4.86□□□□□ -1.63
CAST-239ENST00000513666 SPINK8P0C7L1 97 aa4.86□□□□□ -1.63
CAST-239ENST00000513666 MOBPQ13875 183 aa4.86□□□□□ -1.63
CAST-239ENST00000513666 SSBP3-AS1Q7Z2R9 100 aa4.86□□□□□ -1.63
CAST-239ENST00000513666 SMCR5Q8TEV8 140 aa4.85□□□□□ -1.63
CAST-239ENST00000513666 CLLU1Q5K131 121 aa4.84□□□□□ -1.63
CAST-239ENST00000513666 COX6B2Q6YFQ2 88 aa4.84□□□□□ -1.63
CAST-239ENST00000513666 ERG28Q9UKR5 140 aa4.84□□□□□ -1.63
CAST-239ENST00000513666 IGLV9-49A0A0B4J1Y8 123 aa4.83□□□□□ -1.64
CAST-239ENST00000513666 PCP4L1A6NKN8 68 aa4.83□□□□□ -1.64
CAST-239ENST00000513666 COX17Q14061 63 aa4.83□□□□□ -1.64
CAST-239ENST00000513666 UQCC3Q6UW78 93 aa4.83□□□□□ -1.64
CAST-239ENST00000513666 ATP5L2Q7Z4Y8 100 aa4.83□□□□□ -1.64
CAST-239ENST00000513666 TOMM6Q96B49 74 aa4.83□□□□□ -1.64
CAST-239ENST00000513666 NAT8Q9UHE5 227 aa4.83□□□□□ -1.64
CAST-239ENST00000513666 PRYO14603 147 aa4.82□□□□□ -1.64
CAST-239ENST00000513666 G0S2P27469 103 aa4.82□□□□□ -1.64
CAST-239ENST00000513666 GAGE2AQ6NT46 116 aa4.82□□□□□ -1.64
CAST-239ENST00000513666 SPRR1AP35321 89 aa4.82□□□□□ -1.64
CAST-239ENST00000513666 ERASQ7Z444 233 aa4.82□□□□□ -1.64
CAST-239ENST00000513666 NXT2Q9NPJ8 142 aaKnown RBP4.82□□□□□ -1.64
CAST-239ENST00000513666 IGLV5-39A0A0G2JS06 123 aa4.81□□□□□ -1.64
CAST-239ENST00000513666 C9orf92A6NGG3 77 aa4.81□□□□□ -1.64
CAST-239ENST00000513666 ATP6V1G1O75348 118 aa4.81□□□□□ -1.64
CAST-239ENST00000513666 SCGB3A1Q96QR1 104 aa4.81□□□□□ -1.64
CAST-239ENST00000513666 KRTAP4-16G5E9R7 235 aaPredicted RBP4.8□□□□□ -1.64
CAST-239ENST00000513666 H3BRM9 83 aa4.8□□□□□ -1.64
CAST-239ENST00000513666 ADCYAP1P18509 176 aa4.8□□□□□ -1.64
CAST-239ENST00000513666 CST9LQ9H4G1 147 aa4.8□□□□□ -1.64
CAST-239ENST00000513666 ETDCA0A1B0GVM5 59 aa4.79□□□□□ -1.64
CAST-239ENST00000513666 ZNF625Q96I27 306 aaPredicted RBP4.79□□□□□ -1.64
CAST-239ENST00000513666 KCNQ1DNQ9H478 68 aa4.79□□□□□ -1.64
CAST-239ENST00000513666 C9JQL5 133 aa4.78□□□□□ -1.64
CAST-239ENST00000513666 CFC1P0CG37 223 aa4.78□□□□□ -1.64
CAST-239ENST00000513666 ERC2-IT1O76042 136 aa4.77□□□□□ -1.65
CAST-239ENST00000513666 PMVKQ15126 192 aa4.77□□□□□ -1.65
CAST-239ENST00000513666 A0A0U1RRA0 63 aa4.76□□□□□ -1.65
CAST-239ENST00000513666 LINC01549A6NIU2 74 aa4.76□□□□□ -1.65
CAST-239ENST00000513666 IGLV6-57P01721 117 aa4.76□□□□□ -1.65
CAST-239ENST00000513666 IFITM2Q01629 132 aa4.76□□□□□ -1.65
CAST-239ENST00000513666 C9orf153Q5TBE3 101 aa4.76□□□□□ -1.65
CAST-239ENST00000513666 SFTA2Q6UW10 78 aa4.76□□□□□ -1.65
CAST-239ENST00000513666 SYNE2Q8WXH0 6885 aaKnown RBP4.75□□□□□ -1.65
CAST-239ENST00000513666 B5MCH6 92 aa4.75□□□□□ -1.65
CAST-239ENST00000513666 MT-ND4LP03901 98 aa4.75□□□□□ -1.65
CAST-239ENST00000513666 IGLC3P0DOY3 106 aa4.75□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 50.1 ms