RNA–Protein interactions for RNA: ENST00000513284.5

RNF4-218, Transcript of ring finger protein 4, humanhuman

TSL 4

Gene RNF4, Length 517 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF4-218ENST00000513284 APOC3P02656 99 aa6.35□□□□□ -1.39
RNF4-218ENST00000513284 LORP23490 312 aaPredicted RBP6.35□□□□□ -1.39
RNF4-218ENST00000513284 PFN2P35080 140 aa6.35□□□□□ -1.39
RNF4-218ENST00000513284 COX17Q14061 63 aa6.35□□□□□ -1.39
RNF4-218ENST00000513284 KRTAP13-3Q3SY46 172 aa6.35□□□□□ -1.39
RNF4-218ENST00000513284 C18orf32Q8TCD1 76 aa6.35□□□□□ -1.39
RNF4-218ENST00000513284 TRAPPC1Q9Y5R8 145 aa6.35□□□□□ -1.39
RNF4-218ENST00000513284 LINC00614P0C842 121 aa6.34□□□□□ -1.39
RNF4-218ENST00000513284 NDUFA6P56556 154 aa6.34□□□□□ -1.39
RNF4-218ENST00000513284 FAM19A1Q7Z5A9 133 aa6.34□□□□□ -1.39
RNF4-218ENST00000513284 IGLC3P0DOY3 106 aa6.33□□□□□ -1.4
RNF4-218ENST00000513284 KRTAP13-1Q8IUC0 172 aa6.33□□□□□ -1.4
RNF4-218ENST00000513284 SVBPQ8N300 66 aa6.33□□□□□ -1.4
RNF4-218ENST00000513284 ERG28Q9UKR5 140 aa6.33□□□□□ -1.4
RNF4-218ENST00000513284 SNAPINO95295 136 aa6.32□□□□□ -1.4
RNF4-218ENST00000513284 PRLHP81277 87 aa6.32□□□□□ -1.4
RNF4-218ENST00000513284 YPEL4Q96NS1 127 aa6.32□□□□□ -1.4
RNF4-218ENST00000513284 IGLV5-39A0A0G2JS06 123 aa6.31□□□□□ -1.4
RNF4-218ENST00000513284 VPREB1P12018 145 aa6.31□□□□□ -1.4
RNF4-218ENST00000513284 PMCHL1Q16048 86 aa6.31□□□□□ -1.4
RNF4-218ENST00000513284 SPAG11AQ6PDA7 123 aa6.31□□□□□ -1.4
RNF4-218ENST00000513284 CBLN2Q8IUK8 224 aa6.31□□□□□ -1.4
RNF4-218ENST00000513284 TMEM126AQ9H061 195 aa6.31□□□□□ -1.4
RNF4-218ENST00000513284 SND1-IT1Q9HBX3 110 aa6.31□□□□□ -1.4
RNF4-218ENST00000513284 HBDP02042 147 aa6.3□□□□□ -1.4
RNF4-218ENST00000513284 ZNF22P17026 224 aaPredicted RBP6.3□□□□□ -1.4
RNF4-218ENST00000513284 KRTAP10-6P60371 365 aaPredicted RBP6.3□□□□□ -1.4
RNF4-218ENST00000513284 NDUFA5Q16718 116 aa6.3□□□□□ -1.4
RNF4-218ENST00000513284 LINC00337Q8N6G1 96 aa6.3□□□□□ -1.4
RNF4-218ENST00000513284 C4orf48Q5BLP8 95 aa6.29□□□□□ -1.4
RNF4-218ENST00000513284 TMEM170BQ5T4T1 132 aa6.29□□□□□ -1.4
RNF4-218ENST00000513284 ZNF706Q9Y5V0 76 aaPredicted RBP6.29□□□□□ -1.4
RNF4-218ENST00000513284 ATP6V1G1O75348 118 aa6.28□□□□□ -1.4
RNF4-218ENST00000513284 SCO1O75880 301 aa6.28□□□□□ -1.4
RNF4-218ENST00000513284 SEC61BP60468 96 aaKnown RBP6.28□□□□□ -1.4
RNF4-218ENST00000513284 BAGE3Q86Y29 109 aa6.28□□□□□ -1.4
RNF4-218ENST00000513284 ZNF625Q96I27 306 aaPredicted RBP6.28□□□□□ -1.4
RNF4-218ENST00000513284 HIGD2AQ9BW72 106 aa6.28□□□□□ -1.4
RNF4-218ENST00000513284 TMEM238C9JI98 176 aa6.27□□□□□ -1.41
RNF4-218ENST00000513284 M0R378 163 aa6.27□□□□□ -1.41
RNF4-218ENST00000513284 LINC00158P58513 81 aa6.27□□□□□ -1.41
RNF4-218ENST00000513284 S100A12P80511 92 aa6.27□□□□□ -1.41
RNF4-218ENST00000513284 FP248Q71RG6 208 aaPredicted RBP6.27□□□□□ -1.41
RNF4-218ENST00000513284 C3orf22Q8N5N4 141 aa6.27□□□□□ -1.41
RNF4-218ENST00000513284 PLEKHB2Q96CS7 222 aa6.27□□□□□ -1.41
RNF4-218ENST00000513284 C11orf86A6NJI1 115 aa6.26□□□□□ -1.41
RNF4-218ENST00000513284 LINC00587B1AMM8 73 aa6.26□□□□□ -1.41
RNF4-218ENST00000513284 CFC1BP0CG36 223 aa6.26□□□□□ -1.41
RNF4-218ENST00000513284 CHCHD1Q96BP2 118 aaKnown RBP6.25□□□□□ -1.41
RNF4-218ENST00000513284 PRYO14603 147 aa6.24□□□□□ -1.41
RNF4-218ENST00000513284 MEIG1Q5JSS6 88 aa6.24□□□□□ -1.41
RNF4-218ENST00000513284 CHTOPQ9Y3Y2 248 aaKnown RBP6.24□□□□□ -1.41
RNF4-218ENST00000513284 TRAV12-1A0A0B4J245 112 aa6.23□□□□□ -1.41
RNF4-218ENST00000513284 HERV-K104P63124 156 aa6.23□□□□□ -1.41
RNF4-218ENST00000513284 IFI27L1Q96BM0 104 aa6.23□□□□□ -1.41
RNF4-218ENST00000513284 SPRR4Q96PI1 79 aa6.23□□□□□ -1.41
RNF4-218ENST00000513284 MAP1LC3CQ9BXW4 147 aa6.22□□□□□ -1.41
RNF4-218ENST00000513284 A0A0U1RRA0 63 aa6.21□□□□□ -1.42
RNF4-218ENST00000513284 ETDCA0A1B0GVM5 59 aa6.21□□□□□ -1.42
RNF4-218ENST00000513284 TMEM223A0PJW6 202 aa6.21□□□□□ -1.42
RNF4-218ENST00000513284 BOD1L2Q8IYS8 172 aa6.21□□□□□ -1.42
RNF4-218ENST00000513284 FAM19A2Q8N3H0 131 aa6.21□□□□□ -1.42
RNF4-218ENST00000513284 Q8NDZ9 215 aa6.21□□□□□ -1.42
RNF4-218ENST00000513284 NDUFA12Q9UI09 145 aa6.21□□□□□ -1.42
RNF4-218ENST00000513284 SPINK1P00995 79 aa6.2□□□□□ -1.42
RNF4-218ENST00000513284 TRGC2P03986 189 aa6.2□□□□□ -1.42
RNF4-218ENST00000513284 XP32Q5T750 250 aa6.2□□□□□ -1.42
RNF4-218ENST00000513284 SLC7A5P1Q8MH63 180 aa6.2□□□□□ -1.42
RNF4-218ENST00000513284 SSPOA2VEC9 5147 aa6.19□□□□□ -1.42
RNF4-218ENST00000513284 HSBP1O75506 76 aa6.19□□□□□ -1.42
RNF4-218ENST00000513284 SMIM13P0DJ93 91 aa6.19□□□□□ -1.42
RNF4-218ENST00000513284 LINC00310P59036 64 aa6.19□□□□□ -1.42
RNF4-218ENST00000513284 MIR7-3HGQ8N6C7 128 aa6.19□□□□□ -1.42
RNF4-218ENST00000513284 FLGP20930 4061 aaPredicted RBP6.18□□□□□ -1.42
RNF4-218ENST00000513284 MYMXA0A1B0GTQ4 84 aa6.18□□□□□ -1.42
RNF4-218ENST00000513284 NCR3O14931 201 aa6.18□□□□□ -1.42
RNF4-218ENST00000513284 SPRR1AP35321 89 aa6.18□□□□□ -1.42
RNF4-218ENST00000513284 Q8NBF4 154 aa6.18□□□□□ -1.42
RNF4-218ENST00000513284 SMCR5Q8TEV8 140 aa6.18□□□□□ -1.42
RNF4-218ENST00000513284 KCNQ1DNQ9H478 68 aa6.18□□□□□ -1.42
RNF4-218ENST00000513284 COLCA2A8K830 154 aa6.17□□□□□ -1.42
RNF4-218ENST00000513284 SERF1AO75920 110 aa6.16□□□□□ -1.42
RNF4-218ENST00000513284 DAND5Q8N907 189 aa6.16□□□□□ -1.42
RNF4-218ENST00000513284 MIEN1Q9BRT3 115 aa6.16□□□□□ -1.42
RNF4-218ENST00000513284 USH2AO75445 5202 aa6.15□□□□□ -1.42
RNF4-218ENST00000513284 LEPROTL1O95214 131 aa6.15□□□□□ -1.42
RNF4-218ENST00000513284 RPS29P62273 56 aaKnown RBP6.15□□□□□ -1.42
RNF4-218ENST00000513284 GAGE2AQ6NT46 116 aa6.15□□□□□ -1.42
RNF4-218ENST00000513284 SSBP3-AS1Q7Z2R9 100 aa6.15□□□□□ -1.42
RNF4-218ENST00000513284 TRBV10-3A0A0K0K1G6 114 aa6.14□□□□□ -1.43
RNF4-218ENST00000513284 LINC00483Q53H64 154 aa6.14□□□□□ -1.43
RNF4-218ENST00000513284 TRBV10-2A0A0K0K1G8 114 aa6.13□□□□□ -1.43
RNF4-218ENST00000513284 H0Y8G0 127 aa6.13□□□□□ -1.43
RNF4-218ENST00000513284 DDTP30046 118 aa6.13□□□□□ -1.43
RNF4-218ENST00000513284 HERVK_113P61574 105 aa6.13□□□□□ -1.43
RNF4-218ENST00000513284 JOSD1Q15040 202 aaPredicted RBP6.13□□□□□ -1.43
RNF4-218ENST00000513284 CBY1Q9Y3M2 126 aa6.13□□□□□ -1.43
RNF4-218ENST00000513284 IGLV9-49A0A0B4J1Y8 123 aa6.12□□□□□ -1.43
RNF4-218ENST00000513284 KRTAP4-16G5E9R7 235 aaPredicted RBP6.12□□□□□ -1.43
RNF4-218ENST00000513284 FABP4P15090 132 aa6.12□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 68.7 ms