RNA–Protein interactions for RNA: ENST00000511040.5

DDX41-212, Transcript of DEAD-box helicase 41, humanhuman

TSL 3

Gene DDX41, Length 721 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX41-212ENST00000511040 LINC00158P58513 81 aa8.53□□□□□ -1.04
DDX41-212ENST00000511040 SFTA2Q6UW10 78 aa8.53□□□□□ -1.04
DDX41-212ENST00000511040 REG3GQ6UW15 175 aa8.53□□□□□ -1.04
DDX41-212ENST00000511040 MAP1LC3CQ9BXW4 147 aa8.53□□□□□ -1.04
DDX41-212ENST00000511040 PLA2G2DQ9UNK4 145 aa8.53□□□□□ -1.04
DDX41-212ENST00000511040 TSPEAR-AS2P59090 65 aa8.52□□□□□ -1.05
DDX41-212ENST00000511040 COX17Q14061 63 aa8.52□□□□□ -1.05
DDX41-212ENST00000511040 NKAPP1Q8N9T2 125 aa8.52□□□□□ -1.05
DDX41-212ENST00000511040 LINC00167Q96N53 147 aa8.52□□□□□ -1.05
DDX41-212ENST00000511040 TP73-AS1Q9UF72 201 aa8.52□□□□□ -1.05
DDX41-212ENST00000511040 IGKCP01834 107 aa8.51□□□□□ -1.05
DDX41-212ENST00000511040 LINC01600Q96MT4 127 aa8.51□□□□□ -1.05
DDX41-212ENST00000511040 NDUFA12Q9UI09 145 aa8.51□□□□□ -1.05
DDX41-212ENST00000511040 IGLV5-37A0A075B6J1 123 aa8.5□□□□□ -1.05
DDX41-212ENST00000511040 C3orf79P0CE67 100 aa8.5□□□□□ -1.05
DDX41-212ENST00000511040 SMIM13P0DJ93 91 aa8.5□□□□□ -1.05
DDX41-212ENST00000511040 MEIG1Q5JSS6 88 aa8.5□□□□□ -1.05
DDX41-212ENST00000511040 Q8NDZ9 215 aa8.5□□□□□ -1.05
DDX41-212ENST00000511040 LOC105371267A0A1B0GV96 52 aa8.49□□□□□ -1.05
DDX41-212ENST00000511040 SYS1-DBNDD2H3BUS1 97 aa8.49□□□□□ -1.05
DDX41-212ENST00000511040 LEPROTO15243 131 aa8.49□□□□□ -1.05
DDX41-212ENST00000511040 VPREB1P12018 145 aa8.49□□□□□ -1.05
DDX41-212ENST00000511040 DIRC1Q969H9 104 aa8.49□□□□□ -1.05
DDX41-212ENST00000511040 MYMXA0A1B0GTQ4 84 aa8.48□□□□□ -1.05
DDX41-212ENST00000511040 S100A2P29034 98 aa8.48□□□□□ -1.05
DDX41-212ENST00000511040 HERVK_113P61574 105 aa8.48□□□□□ -1.05
DDX41-212ENST00000511040 PLEKHB2Q96CS7 222 aa8.48□□□□□ -1.05
DDX41-212ENST00000511040 H0Y9J4 135 aa8.47□□□□□ -1.05
DDX41-212ENST00000511040 J3QQQ9 107 aa8.47□□□□□ -1.05
DDX41-212ENST00000511040 HERV-K104P63124 156 aa8.47□□□□□ -1.05
DDX41-212ENST00000511040 TNXBP22105 4242 aa8.46□□□□□ -1.05
DDX41-212ENST00000511040 IGKV2-28A0A075B6P5 120 aa8.46□□□□□ -1.06
DDX41-212ENST00000511040 IGKV2D-28P01615 120 aa8.46□□□□□ -1.06
DDX41-212ENST00000511040 KRTDAPP60985 99 aa8.46□□□□□ -1.06
DDX41-212ENST00000511040 RPL24P83731 157 aaKnown RBP8.46□□□□□ -1.06
DDX41-212ENST00000511040 MIR7-3HGQ8N6C7 128 aa8.46□□□□□ -1.06
DDX41-212ENST00000511040 BCE1O60756 84 aa8.45□□□□□ -1.06
DDX41-212ENST00000511040 LGALS3P17931 250 aaKnown RBP8.45□□□□□ -1.06
DDX41-212ENST00000511040 ZNF861PO60384 105 aa8.44□□□□□ -1.06
DDX41-212ENST00000511040 LINC01545Q5VT33 79 aa8.44□□□□□ -1.06
DDX41-212ENST00000511040 KRTAP10-8P60410 259 aa8.43□□□□□ -1.06
DDX41-212ENST00000511040 PET117Q6UWS5 81 aa8.43□□□□□ -1.06
DDX41-212ENST00000511040 BOD1L2Q8IYS8 172 aa8.43□□□□□ -1.06
DDX41-212ENST00000511040 DAND5Q8N907 189 aa8.43□□□□□ -1.06
DDX41-212ENST00000511040 IGLV1-50A0A075B6I6 118 aa8.42□□□□□ -1.06
DDX41-212ENST00000511040 TMEM238C9JI98 176 aa8.42□□□□□ -1.06
DDX41-212ENST00000511040 PRR26Q8N8Z3 221 aa8.42□□□□□ -1.06
DDX41-212ENST00000511040 LINC00587B1AMM8 73 aa8.41□□□□□ -1.06
DDX41-212ENST00000511040 E9PLD3 99 aa8.41□□□□□ -1.06
DDX41-212ENST00000511040 NCR3O14931 201 aa8.41□□□□□ -1.06
DDX41-212ENST00000511040 RPL28P46779 137 aaKnown RBP8.41□□□□□ -1.06
DDX41-212ENST00000511040 NMUP48645 174 aa8.41□□□□□ -1.06
DDX41-212ENST00000511040 UBE2AP49459 152 aa8.41□□□□□ -1.06
DDX41-212ENST00000511040 KRTAP1-4P0C5Y4 121 aa8.4□□□□□ -1.06
DDX41-212ENST00000511040 PYY3Q5JQD4 70 aa8.4□□□□□ -1.06
DDX41-212ENST00000511040 HMCN2Q8NDA2 5059 aa8.39□□□□□ -1.07
DDX41-212ENST00000511040 M0R378 163 aa8.39□□□□□ -1.07
DDX41-212ENST00000511040 ATOH7Q8N100 152 aa8.39□□□□□ -1.07
DDX41-212ENST00000511040 TMEM126AQ9H061 195 aa8.39□□□□□ -1.07
DDX41-212ENST00000511040 A0A0J9YXY3 114 aa8.38□□□□□ -1.07
DDX41-212ENST00000511040 AKR1D1P51857 326 aa8.38□□□□□ -1.07
DDX41-212ENST00000511040 PRLHP81277 87 aa8.38□□□□□ -1.07
DDX41-212ENST00000511040 JOSD1Q15040 202 aaPredicted RBP8.38□□□□□ -1.07
DDX41-212ENST00000511040 FAM19A1Q7Z5A9 133 aa8.38□□□□□ -1.07
DDX41-212ENST00000511040 IGKV2D-26A0A0A0MRZ7 120 aa8.37□□□□□ -1.07
DDX41-212ENST00000511040 KRTAP13-1Q8IUC0 172 aa8.37□□□□□ -1.07
DDX41-212ENST00000511040 NPC2P61916 151 aa8.36□□□□□ -1.07
DDX41-212ENST00000511040 ADAMTSL4-AS1Q5T5F5 129 aa8.36□□□□□ -1.07
DDX41-212ENST00000511040 TTTY13Q9BZ97 58 aa8.36□□□□□ -1.07
DDX41-212ENST00000511040 C20orf202A1L168 122 aa8.35□□□□□ -1.07
DDX41-212ENST00000511040 SCGB1D1O95968 90 aa8.35□□□□□ -1.07
DDX41-212ENST00000511040 ZNF815PA8K554 130 aa8.34□□□□□ -1.07
DDX41-212ENST00000511040 EIF4EBP3O60516 100 aaPredicted RBP8.34□□□□□ -1.07
DDX41-212ENST00000511040 SOSTDC1Q6X4U4 206 aa8.34□□□□□ -1.07
DDX41-212ENST00000511040 MIEN1Q9BRT3 115 aa8.34□□□□□ -1.07
DDX41-212ENST00000511040 ANAPC11Q9NYG5 84 aa8.34□□□□□ -1.07
DDX41-212ENST00000511040 LOC107984156A0A0G2JMH3 177 aa8.33□□□□□ -1.08
DDX41-212ENST00000511040 TRBV10-3A0A0K0K1G6 114 aa8.33□□□□□ -1.08
DDX41-212ENST00000511040 ANKRD39Q53RE8 183 aa8.33□□□□□ -1.08
DDX41-212ENST00000511040 ARL17AQ8IVW1 177 aa8.33□□□□□ -1.08
DDX41-212ENST00000511040 PRYO14603 147 aa8.31□□□□□ -1.08
DDX41-212ENST00000511040 LITAFQ99732 161 aa8.31□□□□□ -1.08
DDX41-212ENST00000511040 HIGD2AQ9BW72 106 aa8.3□□□□□ -1.08
DDX41-212ENST00000511040 KCNQ1DNQ9H478 68 aa8.3□□□□□ -1.08
DDX41-212ENST00000511040 SPANXB1Q9NS25 103 aaPredicted RBP8.3□□□□□ -1.08
DDX41-212ENST00000511040 A0A087X002 238 aa8.29□□□□□ -1.08
DDX41-212ENST00000511040 DDTP30046 118 aa8.29□□□□□ -1.08
DDX41-212ENST00000511040 RPL13AP40429 203 aaKnown RBP8.29□□□□□ -1.08
DDX41-212ENST00000511040 TRBV10-2A0A0K0K1G8 114 aa8.28□□□□□ -1.08
DDX41-212ENST00000511040 TIMM17BO60830 172 aa8.28□□□□□ -1.08
DDX41-212ENST00000511040 LINC00308Q8TCZ7 52 aa8.28□□□□□ -1.08
DDX41-212ENST00000511040 ETDCA0A1B0GVM5 59 aa8.27□□□□□ -1.09
DDX41-212ENST00000511040 NDUFC2O95298 119 aa8.27□□□□□ -1.09
DDX41-212ENST00000511040 CRYGAP11844 174 aa8.27□□□□□ -1.09
DDX41-212ENST00000511040 SPRR1AP35321 89 aa8.27□□□□□ -1.09
DDX41-212ENST00000511040 S100A7L2Q5SY68 101 aa8.27□□□□□ -1.09
DDX41-212ENST00000511040 SCGB1D4Q6XE38 83 aa8.26□□□□□ -1.09
DDX41-212ENST00000511040 PCP2Q8IVA1 136 aa8.26□□□□□ -1.09
DDX41-212ENST00000511040 LINC00337Q8N6G1 96 aa8.26□□□□□ -1.09
DDX41-212ENST00000511040 KRTAP4-16G5E9R7 235 aaPredicted RBP8.25□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 108.9 ms