RNA–Protein interactions for RNA: ENST00000510187.5

SQSTM1-213, Transcript of sequestosome 1, humanhuman

TSL 5 BASIC

Gene SQSTM1, Length 1,714 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SQSTM1-213ENST00000510187 CHCHD10Q8WYQ3 142 aaPredicted RBP10.91□□□□□ -0.66
SQSTM1-213ENST00000510187 STAB2Q8WWQ8 2551 aa10.91□□□□□ -0.66
SQSTM1-213ENST00000510187 TRAV10A0A0B4J240 114 aa10.9□□□□□ -0.66
SQSTM1-213ENST00000510187 MUC7Q8TAX7 377 aa10.9□□□□□ -0.66
SQSTM1-213ENST00000510187 REG3AQ06141 175 aa10.89□□□□□ -0.67
SQSTM1-213ENST00000510187 SMCR5Q8TEV8 140 aa10.89□□□□□ -0.67
SQSTM1-213ENST00000510187 FBN3Q75N90 2809 aa10.89□□□□□ -0.67
SQSTM1-213ENST00000510187 LECT2O14960 151 aa10.88□□□□□ -0.67
SQSTM1-213ENST00000510187 ANGP03950 147 aaKnown RBP10.88□□□□□ -0.67
SQSTM1-213ENST00000510187 LINC00167Q96N53 147 aa10.88□□□□□ -0.67
SQSTM1-213ENST00000510187 H3BNG1 76 aa10.87□□□□□ -0.67
SQSTM1-213ENST00000510187 LELP1Q5T871 98 aa10.87□□□□□ -0.67
SQSTM1-213ENST00000510187 GAGE2AQ6NT46 116 aa10.87□□□□□ -0.67
SQSTM1-213ENST00000510187 ORMDL1Q9P0S3 153 aa10.86□□□□□ -0.67
SQSTM1-213ENST00000510187 KLK5Q9Y337 293 aaPredicted RBP10.86□□□□□ -0.67
SQSTM1-213ENST00000510187 TMEM126AQ9H061 195 aa10.85□□□□□ -0.67
SQSTM1-213ENST00000510187 IGLV10-54A0A075B6I4 117 aa10.81□□□□□ -0.68
SQSTM1-213ENST00000510187 CCDC179H3BU77 68 aa10.81□□□□□ -0.68
SQSTM1-213ENST00000510187 PRR34Q9NV39 138 aa10.81□□□□□ -0.68
SQSTM1-213ENST00000510187 Q8N3U1 123 aa10.81□□□□□ -0.68
SQSTM1-213ENST00000510187 C14orf132Q9NPU4 83 aa10.81□□□□□ -0.68
SQSTM1-213ENST00000510187 FAM236AA0A1B0GUQ0 79 aa10.8□□□□□ -0.68
SQSTM1-213ENST00000510187 FAM236BA0A1B0GV22 79 aa10.8□□□□□ -0.68
SQSTM1-213ENST00000510187 B5MCH6 92 aa10.8□□□□□ -0.68
SQSTM1-213ENST00000510187 SPAG11BQ08648 103 aa10.8□□□□□ -0.68
SQSTM1-213ENST00000510187 Q8N814 137 aa10.8□□□□□ -0.68
SQSTM1-213ENST00000510187 C9orf129Q5T035 196 aaKnown RBP10.79□□□□□ -0.68
SQSTM1-213ENST00000510187 JMJD7-PLA2G4BH0Y9G9 81 aa10.78□□□□□ -0.68
SQSTM1-213ENST00000510187 GVQW2A0A096LPI5 108 aaPredicted RBP10.78□□□□□ -0.68
SQSTM1-213ENST00000510187 TMEM256-PLSCR3K7ERE1 68 aa10.78□□□□□ -0.68
SQSTM1-213ENST00000510187 NCR3O14931 201 aa10.77□□□□□ -0.69
SQSTM1-213ENST00000510187 SLPIP03973 132 aa10.77□□□□□ -0.69
SQSTM1-213ENST00000510187 PRR3P79522 188 aaKnown RBP10.77□□□□□ -0.69
SQSTM1-213ENST00000510187 Q6JHZ5 121 aa10.77□□□□□ -0.69
SQSTM1-213ENST00000510187 LYPD5Q6UWN5 251 aa10.77□□□□□ -0.69
SQSTM1-213ENST00000510187 NUPR2A6NF83 97 aa10.76□□□□□ -0.69
SQSTM1-213ENST00000510187 C9orf116Q5BN46 136 aaPredicted RBP10.76□□□□□ -0.69
SQSTM1-213ENST00000510187 CCKP06307 115 aa10.75□□□□□ -0.69
SQSTM1-213ENST00000510187 S100A7L2Q5SY68 101 aa10.75□□□□□ -0.69
SQSTM1-213ENST00000510187 ESRGQ1W209 222 aa10.74□□□□□ -0.69
SQSTM1-213ENST00000510187 UNQ6190/PRO20217Q6UXQ8 127 aa10.74□□□□□ -0.69
SQSTM1-213ENST00000510187 HIST1H4AP62805 103 aaKnown RBP10.73□□□□□ -0.69
SQSTM1-213ENST00000510187 C10orf25Q5T742 122 aa10.73□□□□□ -0.69
SQSTM1-213ENST00000510187 ENHOQ6UWT2 76 aa10.73□□□□□ -0.69
SQSTM1-213ENST00000510187 KLK12Q9UKR0 248 aa10.73□□□□□ -0.69
SQSTM1-213ENST00000510187 C6orf99Q4VX62 202 aa10.72□□□□□ -0.69
SQSTM1-213ENST00000510187 LINC00575Q6W349 94 aa10.72□□□□□ -0.69
SQSTM1-213ENST00000510187 Q8NDZ9 215 aa10.72□□□□□ -0.69
SQSTM1-213ENST00000510187 LINC00846Q9NV44 126 aa10.72□□□□□ -0.69
SQSTM1-213ENST00000510187 SS18L2Q9UHA2 77 aa10.72□□□□□ -0.69
SQSTM1-213ENST00000510187 C6orf223Q8N319 242 aa10.72□□□□□ -0.69
SQSTM1-213ENST00000510187 TGP01266 2768 aa10.71□□□□□ -0.69
SQSTM1-213ENST00000510187 H3BQ85 93 aa10.71□□□□□ -0.69
SQSTM1-213ENST00000510187 IGLV6-57P01721 117 aa10.71□□□□□ -0.69
SQSTM1-213ENST00000510187 WWC2-AS2Q96NR7 200 aa10.7□□□□□ -0.7
SQSTM1-213ENST00000510187 APLNQ9ULZ1 77 aa10.7□□□□□ -0.7
SQSTM1-213ENST00000510187 DNAH7Q8WXX0 4024 aa10.69□□□□□ -0.7
SQSTM1-213ENST00000510187 ATOX1O00244 68 aa10.69□□□□□ -0.7
SQSTM1-213ENST00000510187 ATP5EP2Q5VTU8 51 aa10.69□□□□□ -0.7
SQSTM1-213ENST00000510187 CSMD3Q7Z407 3707 aa10.68□□□□□ -0.7
SQSTM1-213ENST00000510187 UQCRQO14949 82 aa10.68□□□□□ -0.7
SQSTM1-213ENST00000510187 C3orf22Q8N5N4 141 aa10.68□□□□□ -0.7
SQSTM1-213ENST00000510187 LINC00588Q9Y4M8 146 aa10.68□□□□□ -0.7
SQSTM1-213ENST00000510187 hADV29S1A0JD25 119 aa10.67□□□□□ -0.7
SQSTM1-213ENST00000510187 WFDC10BQ8IUB3 73 aa10.67□□□□□ -0.7
SQSTM1-213ENST00000510187 C6orf48Q9UBA6 75 aa10.67□□□□□ -0.7
SQSTM1-213ENST00000510187 ZNF561-AS1K7EIQ3 104 aa10.66□□□□□ -0.7
SQSTM1-213ENST00000510187 RPL18AQ02543 176 aaKnown RBP10.65□□□□□ -0.7
SQSTM1-213ENST00000510187 LINC00526Q96FQ7 95 aa10.65□□□□□ -0.7
SQSTM1-213ENST00000510187 IGKV3D-7A0A0C4DH55 119 aa10.64□□□□□ -0.71
SQSTM1-213ENST00000510187 DYNC2H1Q8NCM8 4307 aaKnown RBP10.64□□□□□ -0.71
SQSTM1-213ENST00000510187 LOC110117498A0A087WWA1 95 aa10.63□□□□□ -0.71
SQSTM1-213ENST00000510187 COX7CP15954 63 aa10.63□□□□□ -0.71
SQSTM1-213ENST00000510187 UBE2DNLQ8IWF7 75 aa10.63□□□□□ -0.71
SQSTM1-213ENST00000510187 TRAV23DV6A0A075B6W5 121 aa10.62□□□□□ -0.71
SQSTM1-213ENST00000510187 TRBV7-6A0A0J9YX20 115 aa10.62□□□□□ -0.71
SQSTM1-213ENST00000510187 KRTAP26-1Q6PEX3 210 aa10.62□□□□□ -0.71
SQSTM1-213ENST00000510187 DIRC1Q969H9 104 aa10.62□□□□□ -0.71
SQSTM1-213ENST00000510187 UPK3BQ9BT76 320 aa10.62□□□□□ -0.71
SQSTM1-213ENST00000510187 STARD9Q9P2P6 4700 aa10.62□□□□□ -0.71
SQSTM1-213ENST00000510187 F8WDY8 70 aa10.61□□□□□ -0.71
SQSTM1-213ENST00000510187 C9orf153Q5TBE3 101 aa10.61□□□□□ -0.71
SQSTM1-213ENST00000510187 C2orf48Q96LS8 159 aa10.61□□□□□ -0.71
SQSTM1-213ENST00000510187 TRBV10-3A0A0K0K1G6 114 aa10.61□□□□□ -0.71
SQSTM1-213ENST00000510187 RBM3P98179 157 aaKnown RBP10.61□□□□□ -0.71
SQSTM1-213ENST00000510187 GHRHP01286 108 aa10.6□□□□□ -0.71
SQSTM1-213ENST00000510187 PDE6GP18545 87 aa10.6□□□□□ -0.71
SQSTM1-213ENST00000510187 LINC01556Q5JQF7 62 aa10.6□□□□□ -0.71
SQSTM1-213ENST00000510187 CAMK2N2Q96S95 79 aa10.6□□□□□ -0.71
SQSTM1-213ENST00000510187 DNAH10OSP0CZ25 163 aa10.59□□□□□ -0.71
SQSTM1-213ENST00000510187 Q6ZQT0 140 aa10.59□□□□□ -0.71
SQSTM1-213ENST00000510187 UBL5Q9BZL1 73 aa10.59□□□□□ -0.71
SQSTM1-213ENST00000510187 CASC10Q5T4H9 136 aa10.58□□□□□ -0.72
SQSTM1-213ENST00000510187 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP10.58□□□□□ -0.72
SQSTM1-213ENST00000510187 VPREB1P12018 145 aa10.58□□□□□ -0.72
SQSTM1-213ENST00000510187 PLECQ15149 4684 aaKnown RBP10.57□□□□□ -0.72
SQSTM1-213ENST00000510187 LYSTQ99698 3801 aa10.57□□□□□ -0.72
SQSTM1-213ENST00000510187 C3orf84H3BNL1 204 aa10.57□□□□□ -0.72
SQSTM1-213ENST00000510187 ZNF73O43830 326 aaPredicted RBP10.57□□□□□ -0.72
SQSTM1-213ENST00000510187 XAGE1AQ9HD64 81 aa10.57□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 78.4 ms