RNA–Protein interactions for RNA: ENST00000509876.5

PHF3-210, Transcript of PHD finger protein 3, humanhuman

TSL 1 (best)

Gene PHF3, Length 7,124 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHF3-210ENST00000509876 LINC00310P59036 64 aa3.42□□□□□ -1.86
PHF3-210ENST00000509876 BPY2O14599 106 aa3.42□□□□□ -1.86
PHF3-210ENST00000509876 CRYGAP11844 174 aa3.42□□□□□ -1.86
PHF3-210ENST00000509876 NDUFV3P56181 108 aaKnown RBP3.42□□□□□ -1.86
PHF3-210ENST00000509876 ADAMTSL4-AS1Q5T5F5 129 aa3.41□□□□□ -1.86
PHF3-210ENST00000509876 LINC00337Q8N6G1 96 aa3.41□□□□□ -1.86
PHF3-210ENST00000509876 UNC79Q9P2D8 2635 aa3.41□□□□□ -1.86
PHF3-210ENST00000509876 BCE1O60756 84 aa3.41□□□□□ -1.86
PHF3-210ENST00000509876 CHTF8P0CG12 524 aa3.41□□□□□ -1.86
PHF3-210ENST00000509876 LST1O00453 97 aa3.41□□□□□ -1.86
PHF3-210ENST00000509876 TEN1Q86WV5 123 aa3.4□□□□□ -1.86
PHF3-210ENST00000509876 C15orf56Q8N910 161 aa3.4□□□□□ -1.86
PHF3-210ENST00000509876 SETD2Q9BYW2 2564 aaPredicted RBP3.4□□□□□ -1.86
PHF3-210ENST00000509876 XIRP2A4UGR9 3374 aa3.4□□□□□ -1.86
PHF3-210ENST00000509876 MP68P56378 58 aa3.4□□□□□ -1.86
PHF3-210ENST00000509876 CNBPP62633 177 aaKnown RBP3.4□□□□□ -1.86
PHF3-210ENST00000509876 C9orf163Q8N9P6 203 aa3.4□□□□□ -1.86
PHF3-210ENST00000509876 A0A087WYN8 130 aa3.4□□□□□ -1.87
PHF3-210ENST00000509876 TAX1BP3O14907 124 aa3.4□□□□□ -1.87
PHF3-210ENST00000509876 MGAQ8IWI9 3026 aa3.4□□□□□ -1.87
PHF3-210ENST00000509876 TRBV7-6A0A0J9YX20 115 aa3.4□□□□□ -1.87
PHF3-210ENST00000509876 TYMSOSQ8TAI1 123 aa3.4□□□□□ -1.87
PHF3-210ENST00000509876 EPM2AB3EWF7 344 aa3.39□□□□□ -1.87
PHF3-210ENST00000509876 DSPP15924 2871 aaKnown RBP3.39□□□□□ -1.87
PHF3-210ENST00000509876 C2orf91Q6ZV80 131 aa3.39□□□□□ -1.87
PHF3-210ENST00000509876 PRRC2CQ9Y520 2896 aaKnown RBP3.39□□□□□ -1.87
PHF3-210ENST00000509876 TNP2Q05952 138 aa3.39□□□□□ -1.87
PHF3-210ENST00000509876 UNC80Q8N2C7 3258 aa3.39□□□□□ -1.87
PHF3-210ENST00000509876 COL6A3P12111 3177 aa3.38□□□□□ -1.87
PHF3-210ENST00000509876 TLX1NBP0CAT3 122 aa3.38□□□□□ -1.87
PHF3-210ENST00000509876 LINC00528Q8N1L1 170 aa3.38□□□□□ -1.87
PHF3-210ENST00000509876 ANAPC13Q9BS18 74 aa3.38□□□□□ -1.87
PHF3-210ENST00000509876 B5MCH6 92 aa3.38□□□□□ -1.87
PHF3-210ENST00000509876 LINC00575Q6W349 94 aa3.38□□□□□ -1.87
PHF3-210ENST00000509876 Q8NBF4 154 aa3.38□□□□□ -1.87
PHF3-210ENST00000509876 SMR3BP02814 79 aaPredicted RBP3.38□□□□□ -1.87
PHF3-210ENST00000509876 IGKV4-1P06312 121 aa3.37□□□□□ -1.87
PHF3-210ENST00000509876 CHD6Q8TD26 2715 aa3.37□□□□□ -1.87
PHF3-210ENST00000509876 MOBPQ13875 183 aa3.37□□□□□ -1.87
PHF3-210ENST00000509876 Q6ZRX8 168 aa3.37□□□□□ -1.87
PHF3-210ENST00000509876 FAM168BA1KXE4 195 aa3.37□□□□□ -1.87
PHF3-210ENST00000509876 ATP5EP2Q5VTU8 51 aa3.36□□□□□ -1.87
PHF3-210ENST00000509876 IGKV3D-7A0A0C4DH55 119 aa3.36□□□□□ -1.87
PHF3-210ENST00000509876 ELOF1P60002 83 aaKnown RBP3.36□□□□□ -1.87
PHF3-210ENST00000509876 PLA2G2DQ9UNK4 145 aa3.36□□□□□ -1.87
PHF3-210ENST00000509876 J3KT08 172 aa3.36□□□□□ -1.87
PHF3-210ENST00000509876 SMIM20Q8N5G0 67 aa3.36□□□□□ -1.87
PHF3-210ENST00000509876 IGLV1-50A0A075B6I6 118 aa3.35□□□□□ -1.87
PHF3-210ENST00000509876 CHKB-CPT1BH3BT56 60 aa3.35□□□□□ -1.87
PHF3-210ENST00000509876 VPREB1P12018 145 aa3.35□□□□□ -1.87
PHF3-210ENST00000509876 SERTAD4-AS1Q5TG53 156 aa3.35□□□□□ -1.87
PHF3-210ENST00000509876 MUC4Q99102 2169 aa3.35□□□□□ -1.87
PHF3-210ENST00000509876 WFDC2Q14508 124 aa3.35□□□□□ -1.87
PHF3-210ENST00000509876 SPACA4Q8TDM5 124 aa3.35□□□□□ -1.87
PHF3-210ENST00000509876 ZNF861PO60384 105 aa3.35□□□□□ -1.87
PHF3-210ENST00000509876 TRIOO75962 3097 aa3.35□□□□□ -1.87
PHF3-210ENST00000509876 LAMA2P24043 3122 aaKnown RBP3.34□□□□□ -1.87
PHF3-210ENST00000509876 IGLV7-43P04211 117 aa3.34□□□□□ -1.87
PHF3-210ENST00000509876 SPAG11AQ6PDA7 123 aa3.34□□□□□ -1.87
PHF3-210ENST00000509876 KIAA0087Q14695 138 aa3.34□□□□□ -1.88
PHF3-210ENST00000509876 IGHV6-1A0A0B4J1U7 121 aa3.34□□□□□ -1.88
PHF3-210ENST00000509876 C9orf129Q5T035 196 aaKnown RBP3.33□□□□□ -1.88
PHF3-210ENST00000509876 GCN1Q92616 2671 aaKnown RBP3.33□□□□□ -1.88
PHF3-210ENST00000509876 MAST4O15021 2626 aa3.33□□□□□ -1.88
PHF3-210ENST00000509876 A0A087WSZ3 146 aa3.33□□□□□ -1.88
PHF3-210ENST00000509876 SCXQ7RTU7 201 aa3.33□□□□□ -1.88
PHF3-210ENST00000509876 LINC00643Q86TS7 51 aa3.33□□□□□ -1.88
PHF3-210ENST00000509876 IGLV6-57P01721 117 aa3.33□□□□□ -1.88
PHF3-210ENST00000509876 CASC2Q6XLA1 102 aa3.33□□□□□ -1.88
PHF3-210ENST00000509876 LINC00304Q8N9R0 145 aa3.33□□□□□ -1.88
PHF3-210ENST00000509876 KCNQ1DNQ9H478 68 aa3.33□□□□□ -1.88
PHF3-210ENST00000509876 PRR4Q16378 134 aa3.32□□□□□ -1.88
PHF3-210ENST00000509876 UBR5O95071 2799 aaPredicted RBP3.32□□□□□ -1.88
PHF3-210ENST00000509876 FAM236DA0A1B0GTK5 79 aa3.32□□□□□ -1.88
PHF3-210ENST00000509876 FAM236CP0DP71 79 aa3.32□□□□□ -1.88
PHF3-210ENST00000509876 ATRQ13535 2644 aa3.32□□□□□ -1.88
PHF3-210ENST00000509876 SOSTDC1Q6X4U4 206 aa3.32□□□□□ -1.88
PHF3-210ENST00000509876 PSORS1C2Q9UIG4 136 aa3.31□□□□□ -1.88
PHF3-210ENST00000509876 WFDC13Q8IUB5 93 aa3.31□□□□□ -1.88
PHF3-210ENST00000509876 A0A1W2PNN7 141 aa3.31□□□□□ -1.88
PHF3-210ENST00000509876 WDFY4Q6ZS81 3184 aa3.31□□□□□ -1.88
PHF3-210ENST00000509876 ATOX1O00244 68 aa3.31□□□□□ -1.88
PHF3-210ENST00000509876 REV3LO60673 3130 aa3.31□□□□□ -1.88
PHF3-210ENST00000509876 KMT2BQ9UMN6 2715 aaPredicted RBP3.3□□□□□ -1.88
PHF3-210ENST00000509876 IGLV5-37A0A075B6J1 123 aa3.3□□□□□ -1.88
PHF3-210ENST00000509876 CENPEQ02224 2701 aa3.3□□□□□ -1.88
PHF3-210ENST00000509876 SSBP3-AS1Q7Z2R9 100 aa3.3□□□□□ -1.88
PHF3-210ENST00000509876 ST20-AS1Q8NBB2 130 aa3.3□□□□□ -1.88
PHF3-210ENST00000509876 CFAP54Q96N23 3096 aa3.3□□□□□ -1.88
PHF3-210ENST00000509876 A0A0C4DFX4 3053 aa3.29□□□□□ -1.88
PHF3-210ENST00000509876 A0A1B0GW54 56 aa3.29□□□□□ -1.88
PHF3-210ENST00000509876 SDIM1Q6ZPB5 146 aa3.29□□□□□ -1.88
PHF3-210ENST00000509876 PLAC8Q9NZF1 115 aa3.29□□□□□ -1.88
PHF3-210ENST00000509876 LITAFQ99732 161 aa3.29□□□□□ -1.88
PHF3-210ENST00000509876 Q6ZR54 194 aa3.28□□□□□ -1.88
PHF3-210ENST00000509876 EYSQ5T1H1 3165 aa3.28□□□□□ -1.88
PHF3-210ENST00000509876 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP3.28□□□□□ -1.88
PHF3-210ENST00000509876 SEC61GP60059 68 aa3.28□□□□□ -1.88
PHF3-210ENST00000509876 Q5VSD8 79 aa3.27□□□□□ -1.89
PHF3-210ENST00000509876 FAM236AA0A1B0GUQ0 79 aa3.27□□□□□ -1.89
Retrieved 100 of 20,778 RNA–protein pairs in 81.2 ms