RNA–Protein interactions for RNA: ENST00000508756.2

CHD1-205, Transcript of chromodomain helicase DNA binding protein 1, humanhuman

TSL 5

Gene CHD1, Length 724 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD1-205ENST00000508756 FAM208AQ9UK61 1670 aaKnown RBP1.08□□□□□ -2.24
CHD1-205ENST00000508756 RALGAPBQ86X10 1494 aa1.08□□□□□ -2.24
CHD1-205ENST00000508756 A0A0D9SFI3 127 aa1.08□□□□□ -2.24
CHD1-205ENST00000508756 D6R8Y8 96 aa1.08□□□□□ -2.24
CHD1-205ENST00000508756 GNGT1P63211 74 aa1.08□□□□□ -2.24
CHD1-205ENST00000508756 MUSTN1Q8IVN3 82 aa1.08□□□□□ -2.24
CHD1-205ENST00000508756 RGPD8O14715 1765 aaPredicted RBP1.08□□□□□ -2.24
CHD1-205ENST00000508756 PLCH1Q4KWH8 1693 aa1.07□□□□□ -2.24
CHD1-205ENST00000508756 RGPD1P0DJD0 1748 aa1.07□□□□□ -2.24
CHD1-205ENST00000508756 NRAPQ86VF7 1730 aa1.07□□□□□ -2.24
CHD1-205ENST00000508756 CRYBG1Q9Y4K1 1723 aa1.07□□□□□ -2.24
CHD1-205ENST00000508756 H3BQF6 201 aa1.07□□□□□ -2.24
CHD1-205ENST00000508756 LMO7Q8WWI1 1683 aa1.07□□□□□ -2.24
CHD1-205ENST00000508756 PARP4Q9UKK3 1724 aaKnown RBP1.06□□□□□ -2.24
CHD1-205ENST00000508756 KIF20BQ96Q89 1820 aa1.06□□□□□ -2.24
CHD1-205ENST00000508756 FXYD6-FXYD2A0A087WZ82 144 aa1.06□□□□□ -2.24
CHD1-205ENST00000508756 LINC00959A0A1B0GUT2 108 aa1.06□□□□□ -2.24
CHD1-205ENST00000508756 H0Y9P7 68 aa1.06□□□□□ -2.24
CHD1-205ENST00000508756 TP53AIP1Q9HCN2 124 aa1.06□□□□□ -2.24
CHD1-205ENST00000508756 SPCS1Q9Y6A9 102 aa1.06□□□□□ -2.24
CHD1-205ENST00000508756 LTN1O94822 1766 aa1.06□□□□□ -2.24
CHD1-205ENST00000508756 AHCTF1Q8WYP5 2266 aa1.05□□□□□ -2.24
CHD1-205ENST00000508756 NHSQ6T4R5 1651 aa1.05□□□□□ -2.24
CHD1-205ENST00000508756 C6orf201Q7Z4U5 140 aa1.05□□□□□ -2.24
CHD1-205ENST00000508756 QSER1Q2KHR3 1735 aa1.05□□□□□ -2.24
CHD1-205ENST00000508756 RGPD5Q99666 1765 aa1.05□□□□□ -2.24
CHD1-205ENST00000508756 AHNAK2Q8IVF2 5795 aa1.05□□□□□ -2.24
CHD1-205ENST00000508756 FAM208BQ5VWN6 2430 aa1.05□□□□□ -2.24
CHD1-205ENST00000508756 NFAT5O94916 1531 aa1.05□□□□□ -2.24
CHD1-205ENST00000508756 A0A1B0GU69 56 aa1.04□□□□□ -2.24
CHD1-205ENST00000508756 I3L2K1 104 aa1.04□□□□□ -2.24
CHD1-205ENST00000508756 PLAC8Q9NZF1 115 aa1.04□□□□□ -2.24
CHD1-205ENST00000508756 PLIN4Q96Q06 1357 aa1.04□□□□□ -2.24
CHD1-205ENST00000508756 CD163L1Q9NR16 1453 aa1.04□□□□□ -2.24
CHD1-205ENST00000508756 CICQ96RK0 1608 aaPredicted RBP1.04□□□□□ -2.24
CHD1-205ENST00000508756 TTC28Q96AY4 2481 aa1.04□□□□□ -2.24
CHD1-205ENST00000508756 ZNF831Q5JPB2 1677 aa1.04□□□□□ -2.24
CHD1-205ENST00000508756 LY75O60449 1722 aa1.03□□□□□ -2.24
CHD1-205ENST00000508756 PKD1L3Q7Z443 1732 aa1.03□□□□□ -2.24
CHD1-205ENST00000508756 DOT1LQ8TEK3 1739 aa1.03□□□□□ -2.24
CHD1-205ENST00000508756 PAPPA2Q9BXP8 1791 aa1.03□□□□□ -2.24
CHD1-205ENST00000508756 SMIM11AP58511 58 aa1.03□□□□□ -2.24
CHD1-205ENST00000508756 WFDC2Q14508 124 aa1.03□□□□□ -2.24
CHD1-205ENST00000508756 CNFNQ9BYD5 112 aa1.03□□□□□ -2.24
CHD1-205ENST00000508756 PAPPAQ13219 1627 aa1.03□□□□□ -2.24
CHD1-205ENST00000508756 C5P01031 1676 aa1.03□□□□□ -2.24
CHD1-205ENST00000508756 SCN11AQ9UI33 1791 aa1.03□□□□□ -2.24
CHD1-205ENST00000508756 PLCE1Q9P212 2302 aa1.03□□□□□ -2.25
CHD1-205ENST00000508756 IQCF6A8MYZ5 107 aa1.02□□□□□ -2.25
CHD1-205ENST00000508756 HMGN2P05204 90 aaKnown RBP1.02□□□□□ -2.25
CHD1-205ENST00000508756 C4BP0C0L5 1744 aa1.02□□□□□ -2.25
CHD1-205ENST00000508756 RGPD2P0DJD1 1756 aa1.02□□□□□ -2.25
CHD1-205ENST00000508756 NMSQ5H8A3 153 aa1.02□□□□□ -2.25
CHD1-205ENST00000508756 KCPQ6ZWJ8 1503 aa1.02□□□□□ -2.25
CHD1-205ENST00000508756 FRAS1Q86XX4 4008 aa1.01□□□□□ -2.25
CHD1-205ENST00000508756 UBR3Q6ZT12 1888 aa1.01□□□□□ -2.25
CHD1-205ENST00000508756 TOGARAM1Q9Y4F4 1720 aa1.01□□□□□ -2.25
CHD1-205ENST00000508756 APCP25054 2843 aa1.01□□□□□ -2.25
CHD1-205ENST00000508756 KRTAP2-3P0C7H8 128 aa1.01□□□□□ -2.25
CHD1-205ENST00000508756 KRTAP2-4Q9BYR9 128 aa1.01□□□□□ -2.25
CHD1-205ENST00000508756 KRTAP2-1Q9BYU5 128 aa1.01□□□□□ -2.25
CHD1-205ENST00000508756 GOLGA4Q13439 2230 aaKnown RBP1.01□□□□□ -2.25
CHD1-205ENST00000508756 C4AP0C0L4 1744 aa1.01□□□□□ -2.25
CHD1-205ENST00000508756 TJP1Q07157 1748 aa1.01□□□□□ -2.25
CHD1-205ENST00000508756 ANKRD36A6QL64 1941 aa1□□□□□ -2.25
CHD1-205ENST00000508756 HMGN3Q15651 99 aa1□□□□□ -2.25
CHD1-205ENST00000508756 BCORQ6W2J9 1755 aa1□□□□□ -2.25
CHD1-205ENST00000508756 ARFGEF2Q9Y6D5 1785 aa1□□□□□ -2.25
CHD1-205ENST00000508756 TNRC6CQ9HCJ0 1690 aaKnown RBP1□□□□□ -2.25
CHD1-205ENST00000508756 ANKRD36CQ5JPF3 1778 aa0.99□□□□□ -2.25
CHD1-205ENST00000508756 DDX60Q8IY21 1712 aaKnown RBP0.99□□□□□ -2.25
CHD1-205ENST00000508756 TRBV7-4A0A0J9YYF1 115 aa0.99□□□□□ -2.25
CHD1-205ENST00000508756 IGLC2P0DOY2 106 aa0.99□□□□□ -2.25
CHD1-205ENST00000508756 IGLC3P0DOY3 106 aa0.99□□□□□ -2.25
CHD1-205ENST00000508756 Q8IZM0 81 aa0.99□□□□□ -2.25
CHD1-205ENST00000508756 CRIPTQ9P021 101 aa0.99□□□□□ -2.25
CHD1-205ENST00000508756 TIAM2Q8IVF5 1701 aa0.98□□□□□ -2.25
CHD1-205ENST00000508756 LRRC37AA6NMS7 1700 aa0.98□□□□□ -2.25
CHD1-205ENST00000508756 F8P00451 2351 aa0.97□□□□□ -2.25
CHD1-205ENST00000508756 DUOX1Q9NRD9 1551 aa0.97□□□□□ -2.25
CHD1-205ENST00000508756 PRH1P02810 166 aa0.97□□□□□ -2.25
CHD1-205ENST00000508756 PIGYQ3MUY2 71 aa0.97□□□□□ -2.25
CHD1-205ENST00000508756 BDP1A6H8Y1 2624 aa0.96□□□□□ -2.26
CHD1-205ENST00000508756 POLQO75417 2590 aa0.96□□□□□ -2.26
CHD1-205ENST00000508756 SNRPFP62306 86 aaKnown RBP0.96□□□□□ -2.26
CHD1-205ENST00000508756 ALKAL2Q6UX46 152 aa0.96□□□□□ -2.26
CHD1-205ENST00000508756 EP400Q96L91 3159 aa0.96□□□□□ -2.26
CHD1-205ENST00000508756 A0A1B0GUL6 1792 aa0.96□□□□□ -2.26
CHD1-205ENST00000508756 USF3Q68DE3 2245 aa0.95□□□□□ -2.26
CHD1-205ENST00000508756 SPINK6Q6UWN8 80 aa0.95□□□□□ -2.26
CHD1-205ENST00000508756 SMIM5Q71RC9 77 aa0.95□□□□□ -2.26
CHD1-205ENST00000508756 UBE2D4Q9Y2X8 147 aa0.95□□□□□ -2.26
CHD1-205ENST00000508756 URB1O60287 2271 aaKnown RBP0.94□□□□□ -2.26
CHD1-205ENST00000508756 MYMXA0A1B0GTQ4 84 aa0.94□□□□□ -2.26
CHD1-205ENST00000508756 S100A13Q99584 98 aa0.94□□□□□ -2.26
CHD1-205ENST00000508756 RABAC1Q9UI14 185 aa0.94□□□□□ -2.26
CHD1-205ENST00000508756 TNCP24821 2201 aa0.94□□□□□ -2.26
CHD1-205ENST00000508756 ANKRD17O75179 2603 aaKnown RBP0.93□□□□□ -2.26
CHD1-205ENST00000508756 DDX60LQ5H9U9 1706 aaKnown RBP0.93□□□□□ -2.26
CHD1-205ENST00000508756 LINC00643Q86TS7 51 aa0.93□□□□□ -2.26
Retrieved 100 of 20,778 RNA–protein pairs in 53.1 ms