RNA–Protein interactions for RNA: ENST00000508546.5

NEDD9-211, Transcript of neural precursor cell expressed, developmentally down-regulated 9, humanhuman

TSL 5

Gene NEDD9, Length 581 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD9-211ENST00000508546 NDUFA1O15239 70 aa5.54□□□□□ -1.52
NEDD9-211ENST00000508546 IGLC3P0DOY3 106 aa5.54□□□□□ -1.52
NEDD9-211ENST00000508546 UBE2BP63146 152 aa5.54□□□□□ -1.52
NEDD9-211ENST00000508546 RNASE13Q5GAN3 156 aaKnown RBP5.54□□□□□ -1.52
NEDD9-211ENST00000508546 FAM104AQ969W3 186 aa5.54□□□□□ -1.52
NEDD9-211ENST00000508546 AMELXQ99217 191 aa5.54□□□□□ -1.52
NEDD9-211ENST00000508546 C2orf88Q9BSF0 95 aa5.54□□□□□ -1.52
NEDD9-211ENST00000508546 C11orf86A6NJI1 115 aa5.53□□□□□ -1.52
NEDD9-211ENST00000508546 ZNF861PO60384 105 aa5.53□□□□□ -1.52
NEDD9-211ENST00000508546 DDTP30046 118 aa5.53□□□□□ -1.52
NEDD9-211ENST00000508546 ANKRD39Q53RE8 183 aa5.53□□□□□ -1.52
NEDD9-211ENST00000508546 C10orf25Q5T742 122 aa5.53□□□□□ -1.52
NEDD9-211ENST00000508546 ORAOV1Q8WV07 137 aa5.53□□□□□ -1.52
NEDD9-211ENST00000508546 IGHV3OR16-9A0A0B4J2B5 98 aa5.52□□□□□ -1.53
NEDD9-211ENST00000508546 HERVK_113P61574 105 aa5.52□□□□□ -1.53
NEDD9-211ENST00000508546 GAGE2EQ4V326 116 aa5.52□□□□□ -1.53
NEDD9-211ENST00000508546 UNQ6190/PRO20217Q6UXQ8 127 aa5.52□□□□□ -1.53
NEDD9-211ENST00000508546 MIEN1Q9BRT3 115 aa5.52□□□□□ -1.53
NEDD9-211ENST00000508546 C6orf48Q9UBA6 75 aa5.52□□□□□ -1.53
NEDD9-211ENST00000508546 UQCR10Q9UDW1 63 aa5.52□□□□□ -1.53
NEDD9-211ENST00000508546 GAGE2DQ9UEU5 116 aa5.52□□□□□ -1.53
NEDD9-211ENST00000508546 COX8AP10176 69 aa5.51□□□□□ -1.53
NEDD9-211ENST00000508546 NMUP48645 174 aa5.51□□□□□ -1.53
NEDD9-211ENST00000508546 TPRXLQ17RH7 258 aa5.51□□□□□ -1.53
NEDD9-211ENST00000508546 TMEM170BQ5T4T1 132 aa5.51□□□□□ -1.53
NEDD9-211ENST00000508546 SLC25A34Q6PIV7 304 aa5.51□□□□□ -1.53
NEDD9-211ENST00000508546 C14orf144Q96I85 54 aa5.51□□□□□ -1.53
NEDD9-211ENST00000508546 A0A087X002 238 aa5.5□□□□□ -1.53
NEDD9-211ENST00000508546 IGKV2D-26A0A0A0MRZ7 120 aa5.5□□□□□ -1.53
NEDD9-211ENST00000508546 TINCRA0A1B0GVN0 87 aa5.5□□□□□ -1.53
NEDD9-211ENST00000508546 LINC00587B1AMM8 73 aa5.5□□□□□ -1.53
NEDD9-211ENST00000508546 ZNF22P17026 224 aaPredicted RBP5.5□□□□□ -1.53
NEDD9-211ENST00000508546 TP73-AS1Q9UF72 201 aa5.5□□□□□ -1.53
NEDD9-211ENST00000508546 E9PLD3 99 aa5.49□□□□□ -1.53
NEDD9-211ENST00000508546 CRYGAP11844 174 aa5.49□□□□□ -1.53
NEDD9-211ENST00000508546 HERVK_113P63121 156 aa5.49□□□□□ -1.53
NEDD9-211ENST00000508546 SEC11AP67812 179 aa5.49□□□□□ -1.53
NEDD9-211ENST00000508546 FAM19A3Q7Z5A8 133 aa5.49□□□□□ -1.53
NEDD9-211ENST00000508546 TYMSOSQ8TAI1 123 aa5.49□□□□□ -1.53
NEDD9-211ENST00000508546 CDIP1Q9H305 208 aa5.49□□□□□ -1.53
NEDD9-211ENST00000508546 GEMIN7Q9H840 131 aaKnown RBP5.49□□□□□ -1.53
NEDD9-211ENST00000508546 TRBV30A0A0K0K1B3 111 aa5.48□□□□□ -1.53
NEDD9-211ENST00000508546 NDUFC2-KCTD14E9PQ53 114 aa5.48□□□□□ -1.53
NEDD9-211ENST00000508546 KIAA0087Q14695 138 aa5.48□□□□□ -1.53
NEDD9-211ENST00000508546 C9orf129Q5T035 196 aaKnown RBP5.48□□□□□ -1.53
NEDD9-211ENST00000508546 PCP2Q8IVA1 136 aa5.48□□□□□ -1.53
NEDD9-211ENST00000508546 LINC00469Q8N7U9 141 aa5.48□□□□□ -1.53
NEDD9-211ENST00000508546 IGLV5-45A0A087WSX0 123 aa5.47□□□□□ -1.53
NEDD9-211ENST00000508546 TMEM223A0PJW6 202 aa5.47□□□□□ -1.53
NEDD9-211ENST00000508546 H3BRM9 83 aa5.47□□□□□ -1.53
NEDD9-211ENST00000508546 DLEU1O43261 78 aa5.47□□□□□ -1.53
NEDD9-211ENST00000508546 LINC00242Q5T6M2 205 aa5.47□□□□□ -1.53
NEDD9-211ENST00000508546 BOD1L2Q8IYS8 172 aa5.47□□□□□ -1.53
NEDD9-211ENST00000508546 RPL28P46779 137 aaKnown RBP5.46□□□□□ -1.54
NEDD9-211ENST00000508546 RETNLBQ9BQ08 111 aa5.46□□□□□ -1.54
NEDD9-211ENST00000508546 TTTY13Q9BZ97 58 aa5.46□□□□□ -1.54
NEDD9-211ENST00000508546 CDKN2A-AS1Q9UH64 79 aa5.46□□□□□ -1.54
NEDD9-211ENST00000508546 ZNF815PA8K554 130 aa5.45□□□□□ -1.54
NEDD9-211ENST00000508546 J3QQQ9 107 aa5.45□□□□□ -1.54
NEDD9-211ENST00000508546 LEPROTO15243 131 aa5.45□□□□□ -1.54
NEDD9-211ENST00000508546 SPINK8P0C7L1 97 aa5.45□□□□□ -1.54
NEDD9-211ENST00000508546 LGALS3P17931 250 aaKnown RBP5.45□□□□□ -1.54
NEDD9-211ENST00000508546 LINC01547P58512 204 aaPredicted RBP5.45□□□□□ -1.54
NEDD9-211ENST00000508546 TSPEAR-AS2P59090 65 aa5.45□□□□□ -1.54
NEDD9-211ENST00000508546 CTAG1AP78358 180 aa5.45□□□□□ -1.54
NEDD9-211ENST00000508546 C2orf91Q6ZV80 131 aa5.45□□□□□ -1.54
NEDD9-211ENST00000508546 PLEKHB2Q96CS7 222 aa5.45□□□□□ -1.54
NEDD9-211ENST00000508546 C22orf24Q9Y442 160 aa5.45□□□□□ -1.54
NEDD9-211ENST00000508546 IGLV7-46A0A075B6I9 117 aa5.44□□□□□ -1.54
NEDD9-211ENST00000508546 MYMXA0A1B0GTQ4 84 aa5.44□□□□□ -1.54
NEDD9-211ENST00000508546 KRTAP13-2Q52LG2 175 aa5.44□□□□□ -1.54
NEDD9-211ENST00000508546 LBHQ53QV2 105 aaPredicted RBP5.44□□□□□ -1.54
NEDD9-211ENST00000508546 C2orf82Q6UX34 121 aa5.44□□□□□ -1.54
NEDD9-211ENST00000508546 IGLV5-39A0A0G2JS06 123 aa5.43□□□□□ -1.54
NEDD9-211ENST00000508546 SMIM1B2RUZ4 78 aa5.43□□□□□ -1.54
NEDD9-211ENST00000508546 BCE1O60756 84 aa5.43□□□□□ -1.54
NEDD9-211ENST00000508546 LINC00304Q8N9R0 145 aa5.43□□□□□ -1.54
NEDD9-211ENST00000508546 HIGD1BQ9P298 99 aa5.43□□□□□ -1.54
NEDD9-211ENST00000508546 M0R143 59 aa5.42□□□□□ -1.54
NEDD9-211ENST00000508546 FAM229BQ4G0N7 80 aa5.42□□□□□ -1.54
NEDD9-211ENST00000508546 SCGB1D4Q6XE38 83 aa5.42□□□□□ -1.54
NEDD9-211ENST00000508546 LINC01561Q8N1V8 128 aa5.42□□□□□ -1.54
NEDD9-211ENST00000508546 SNHG12Q9BXW3 62 aa5.42□□□□□ -1.54
NEDD9-211ENST00000508546 HINT1P49773 126 aaPredicted RBP5.41□□□□□ -1.54
NEDD9-211ENST00000508546 HSD52Q0P140 79 aa5.41□□□□□ -1.54
NEDD9-211ENST00000508546 BATFQ16520 125 aa5.41□□□□□ -1.54
NEDD9-211ENST00000508546 MRPL55Q7Z7F7 128 aaKnown RBP5.41□□□□□ -1.54
NEDD9-211ENST00000508546 ANAPC11Q9NYG5 84 aa5.41□□□□□ -1.54
NEDD9-211ENST00000508546 NDUFA12Q9UI09 145 aa5.41□□□□□ -1.54
NEDD9-211ENST00000508546 PPDPFQ9H3Y8 114 aa5.4□□□□□ -1.54
NEDD9-211ENST00000508546 XAGE1AQ9HD64 81 aa5.4□□□□□ -1.54
NEDD9-211ENST00000508546 TAL2Q16559 108 aa5.39□□□□□ -1.55
NEDD9-211ENST00000508546 BVES-AS1Q5T3Y7 98 aa5.39□□□□□ -1.55
NEDD9-211ENST00000508546 KRTAP13-1Q8IUC0 172 aa5.39□□□□□ -1.55
NEDD9-211ENST00000508546 A0A0J9YXY3 114 aa5.38□□□□□ -1.55
NEDD9-211ENST00000508546 TMEM238C9JI98 176 aa5.38□□□□□ -1.55
NEDD9-211ENST00000508546 PRSS2P07478 247 aa5.38□□□□□ -1.55
NEDD9-211ENST00000508546 CKS1BP61024 79 aa5.38□□□□□ -1.55
NEDD9-211ENST00000508546 ASB16-AS1Q495Z4 193 aa5.38□□□□□ -1.55
NEDD9-211ENST00000508546 COX7B2Q8TF08 81 aa5.38□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 86.5 ms