RNA–Protein interactions for RNA: ENST00000508474.5

UBE2D3-224, Transcript of ubiquitin conjugating enzyme E2 D3, humanhuman

TSL 2

Gene UBE2D3, Length 4,819 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D3-224ENST00000508474 SPINK1P00995 79 aa4.98□□□□□ -1.61
UBE2D3-224ENST00000508474 CIRBP-AS1Q8TBR5 109 aa4.98□□□□□ -1.61
UBE2D3-224ENST00000508474 DNAH12Q6ZR08 3092 aa4.98□□□□□ -1.61
UBE2D3-224ENST00000508474 SPANXA2-OT1Q8N9U9 137 aa4.98□□□□□ -1.61
UBE2D3-224ENST00000508474 A8MWP4 228 aa4.98□□□□□ -1.61
UBE2D3-224ENST00000508474 PTPRQQ9UMZ3 2332 aa4.97□□□□□ -1.61
UBE2D3-224ENST00000508474 K7EQZ3 153 aa4.97□□□□□ -1.61
UBE2D3-224ENST00000508474 CDSNQ15517 529 aa4.97□□□□□ -1.61
UBE2D3-224ENST00000508474 UQCR11O14957 56 aa4.97□□□□□ -1.61
UBE2D3-224ENST00000508474 Q5XG85 94 aa4.97□□□□□ -1.61
UBE2D3-224ENST00000508474 LINC01556Q5JQF7 62 aa4.97□□□□□ -1.61
UBE2D3-224ENST00000508474 CDC42SE1Q9NRR8 79 aa4.96□□□□□ -1.62
UBE2D3-224ENST00000508474 CSPG4Q6UVK1 2322 aa4.96□□□□□ -1.62
UBE2D3-224ENST00000508474 ATRXP46100 2492 aa4.96□□□□□ -1.62
UBE2D3-224ENST00000508474 H3BNG1 76 aa4.96□□□□□ -1.62
UBE2D3-224ENST00000508474 LINC00528Q8N1L1 170 aa4.95□□□□□ -1.62
UBE2D3-224ENST00000508474 CEP350Q5VT06 3117 aa4.95□□□□□ -1.62
UBE2D3-224ENST00000508474 PLA2G2AP14555 144 aa4.94□□□□□ -1.62
UBE2D3-224ENST00000508474 A0A1W2PPR1 153 aa4.94□□□□□ -1.62
UBE2D3-224ENST00000508474 KCNQ1DNQ9H478 68 aa4.93□□□□□ -1.62
UBE2D3-224ENST00000508474 CENPFP49454 3210 aa4.93□□□□□ -1.62
UBE2D3-224ENST00000508474 PCNTO95613 3336 aa4.93□□□□□ -1.62
UBE2D3-224ENST00000508474 SPG11Q96JI7 2443 aa4.93□□□□□ -1.62
UBE2D3-224ENST00000508474 IGKV2D-30A0A075B6S6 120 aa4.93□□□□□ -1.62
UBE2D3-224ENST00000508474 IGKV2-30P06310 120 aa4.93□□□□□ -1.62
UBE2D3-224ENST00000508474 C9orf129Q5T035 196 aaKnown RBP4.93□□□□□ -1.62
UBE2D3-224ENST00000508474 HIVEP2P31629 2446 aa4.93□□□□□ -1.62
UBE2D3-224ENST00000508474 RPL37AP61513 92 aaKnown RBP4.92□□□□□ -1.62
UBE2D3-224ENST00000508474 ST20-AS1Q8NBB2 130 aa4.92□□□□□ -1.62
UBE2D3-224ENST00000508474 MDFIQ99750 246 aa4.92□□□□□ -1.62
UBE2D3-224ENST00000508474 Q6ZRP5 223 aa4.92□□□□□ -1.62
UBE2D3-224ENST00000508474 MIR22HGQ0VDD5 57 aa4.92□□□□□ -1.62
UBE2D3-224ENST00000508474 SPINT4Q6UDR6 99 aa4.91□□□□□ -1.62
UBE2D3-224ENST00000508474 MRPL34Q9BQ48 92 aaKnown RBP4.91□□□□□ -1.62
UBE2D3-224ENST00000508474 FAM208BQ5VWN6 2430 aa4.91□□□□□ -1.62
UBE2D3-224ENST00000508474 INAFM1C9JVW0 142 aa4.91□□□□□ -1.62
UBE2D3-224ENST00000508474 X6R8D5 127 aa4.9□□□□□ -1.62
UBE2D3-224ENST00000508474 OCR1Q9BZK8 76 aa4.9□□□□□ -1.62
UBE2D3-224ENST00000508474 FAM229AH3BQW9 127 aa4.9□□□□□ -1.63
UBE2D3-224ENST00000508474 RBM12B-AS1Q9P1G2 102 aa4.89□□□□□ -1.63
UBE2D3-224ENST00000508474 COL27A1Q8IZC6 1860 aaPredicted RBP4.89□□□□□ -1.63
UBE2D3-224ENST00000508474 PRO3102Q9H379 93 aa4.89□□□□□ -1.63
UBE2D3-224ENST00000508474 IGLV1-50A0A075B6I6 118 aa4.88□□□□□ -1.63
UBE2D3-224ENST00000508474 EPM2AB3EWF7 344 aa4.88□□□□□ -1.63
UBE2D3-224ENST00000508474 Q8N377 158 aa4.88□□□□□ -1.63
UBE2D3-224ENST00000508474 FP248Q71RG6 208 aaPredicted RBP4.88□□□□□ -1.63
UBE2D3-224ENST00000508474 LINC00313P59037 77 aa4.87□□□□□ -1.63
UBE2D3-224ENST00000508474 IGFL1Q6UW32 110 aa4.87□□□□□ -1.63
UBE2D3-224ENST00000508474 ACACBO00763 2458 aa4.87□□□□□ -1.63
UBE2D3-224ENST00000508474 C16orf90A8MZG2 172 aa4.87□□□□□ -1.63
UBE2D3-224ENST00000508474 Q75L30 129 aa4.87□□□□□ -1.63
UBE2D3-224ENST00000508474 M0R2N4 97 aa4.86□□□□□ -1.63
UBE2D3-224ENST00000508474 OXLD1Q5BKU9 147 aa4.86□□□□□ -1.63
UBE2D3-224ENST00000508474 C8orf17Q9NRJ1 99 aa4.86□□□□□ -1.63
UBE2D3-224ENST00000508474 HTTP42858 3142 aa4.86□□□□□ -1.63
UBE2D3-224ENST00000508474 IGLV5-52A0A0A0MRZ9 124 aa4.86□□□□□ -1.63
UBE2D3-224ENST00000508474 PLA2G2DQ9UNK4 145 aa4.85□□□□□ -1.63
UBE2D3-224ENST00000508474 ZFHX2Q9C0A1 2572 aaPredicted RBP4.85□□□□□ -1.63
UBE2D3-224ENST00000508474 OTOGLQ3ZCN5 2332 aa4.85□□□□□ -1.63
UBE2D3-224ENST00000508474 MUC4Q99102 2169 aa4.85□□□□□ -1.63
UBE2D3-224ENST00000508474 PRR34Q9NV39 138 aa4.85□□□□□ -1.63
UBE2D3-224ENST00000508474 SSBP3-AS1Q7Z2R9 100 aa4.84□□□□□ -1.63
UBE2D3-224ENST00000508474 ZNF575Q86XF7 245 aa4.84□□□□□ -1.63
UBE2D3-224ENST00000508474 IGLV8-61A0A075B6I0 122 aa4.84□□□□□ -1.63
UBE2D3-224ENST00000508474 IGLV5-48A0A075B6I7 105 aa4.84□□□□□ -1.63
UBE2D3-224ENST00000508474 PTPN13Q12923 2485 aa4.84□□□□□ -1.64
UBE2D3-224ENST00000508474 CYSTM1Q9H1C7 97 aa4.83□□□□□ -1.64
UBE2D3-224ENST00000508474 A0A1B0GVX0 72 aa4.83□□□□□ -1.64
UBE2D3-224ENST00000508474 A0A1W2PNM2 257 aa4.83□□□□□ -1.64
UBE2D3-224ENST00000508474 PHF5AQ7RTV0 110 aaKnown RBP4.82□□□□□ -1.64
UBE2D3-224ENST00000508474 TLX1NBP0CAT3 122 aa4.82□□□□□ -1.64
UBE2D3-224ENST00000508474 Q8NAQ8 132 aa4.82□□□□□ -1.64
UBE2D3-224ENST00000508474 CSNK1G2-AS1Q8NCQ2 148 aa4.82□□□□□ -1.64
UBE2D3-224ENST00000508474 LY6G6CO95867 125 aa4.81□□□□□ -1.64
UBE2D3-224ENST00000508474 LINC01554Q52M75 96 aa4.81□□□□□ -1.64
UBE2D3-224ENST00000508474 C1orf134Q5TEV5 83 aa4.81□□□□□ -1.64
UBE2D3-224ENST00000508474 DNAH10OSP0CZ25 163 aa4.8□□□□□ -1.64
UBE2D3-224ENST00000508474 FAM229BQ4G0N7 80 aa4.8□□□□□ -1.64
UBE2D3-224ENST00000508474 LINC00612Q8N6U2 182 aa4.8□□□□□ -1.64
UBE2D3-224ENST00000508474 PCSK5Q92824 1860 aa4.8□□□□□ -1.64
UBE2D3-224ENST00000508474 IGLV7-46A0A075B6I9 117 aa4.8□□□□□ -1.64
UBE2D3-224ENST00000508474 NAV2Q8IVL1 2488 aa4.8□□□□□ -1.64
UBE2D3-224ENST00000508474 LINC01558Q9Y6Z2 57 aa4.8□□□□□ -1.64
UBE2D3-224ENST00000508474 OXTP01178 125 aa4.79□□□□□ -1.64
UBE2D3-224ENST00000508474 Q8N9P0 234 aaPredicted RBP4.79□□□□□ -1.64
UBE2D3-224ENST00000508474 CRIPTQ9P021 101 aa4.79□□□□□ -1.64
UBE2D3-224ENST00000508474 KRTAP10-9P60411 292 aa4.79□□□□□ -1.64
UBE2D3-224ENST00000508474 FAM168BA1KXE4 195 aa4.79□□□□□ -1.64
UBE2D3-224ENST00000508474 C15orf56Q8N910 161 aa4.79□□□□□ -1.64
UBE2D3-224ENST00000508474 H3BS24 57 aa4.78□□□□□ -1.64
UBE2D3-224ENST00000508474 SPRR4Q96PI1 79 aa4.78□□□□□ -1.64
UBE2D3-224ENST00000508474 BRCA2P51587 3418 aa4.78□□□□□ -1.64
UBE2D3-224ENST00000508474 MYO9AB2RTY4 2548 aa4.78□□□□□ -1.64
UBE2D3-224ENST00000508474 SPACA4Q8TDM5 124 aa4.77□□□□□ -1.65
UBE2D3-224ENST00000508474 FAM104AQ969W3 186 aa4.77□□□□□ -1.65
UBE2D3-224ENST00000508474 DSCR10P59022 87 aa4.77□□□□□ -1.65
UBE2D3-224ENST00000508474 LINC00588Q9Y4M8 146 aa4.77□□□□□ -1.65
UBE2D3-224ENST00000508474 A0A096LNT2 108 aa4.76□□□□□ -1.65
UBE2D3-224ENST00000508474 Q5VV11 94 aa4.76□□□□□ -1.65
UBE2D3-224ENST00000508474 CACNA1AO00555 2505 aa4.76□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 72.4 ms