RNA–Protein interactions for RNA: ENST00000504948.5

ATP2C1-208, Transcript of ATPase secretory pathway Ca2+ transporting 1, humanhuman

TSL 1 (best) BASIC

Gene ATP2C1, Length 4,714 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATP2C1-208ENST00000504948 IGHV4-30-4P0DP06 118 aa5.56□□□□□ -1.52
ATP2C1-208ENST00000504948 IGHV4-31P0DP07 118 aa5.56□□□□□ -1.52
ATP2C1-208ENST00000504948 BEAN1Q3B7T3 259 aa5.56□□□□□ -1.52
ATP2C1-208ENST00000504948 C9orf85Q96MD7 179 aa5.56□□□□□ -1.52
ATP2C1-208ENST00000504948 HIGD2AQ9BW72 106 aa5.56□□□□□ -1.52
ATP2C1-208ENST00000504948 A6NED7 52 aa5.56□□□□□ -1.52
ATP2C1-208ENST00000504948 ADORA2A-AS1P86434 159 aa5.56□□□□□ -1.52
ATP2C1-208ENST00000504948 UNQ6190/PRO20217Q6UXQ8 127 aa5.56□□□□□ -1.52
ATP2C1-208ENST00000504948 FAM19A3Q7Z5A8 133 aa5.56□□□□□ -1.52
ATP2C1-208ENST00000504948 AVPP01185 164 aa5.55□□□□□ -1.52
ATP2C1-208ENST00000504948 DIRC1Q969H9 104 aa5.55□□□□□ -1.52
ATP2C1-208ENST00000504948 LINC00482Q8N8I6 264 aa5.55□□□□□ -1.52
ATP2C1-208ENST00000504948 SERP1Q9Y6X1 66 aa5.55□□□□□ -1.52
ATP2C1-208ENST00000504948 TNFRSF13BO14836 293 aaPredicted RBP5.55□□□□□ -1.52
ATP2C1-208ENST00000504948 CDC42SE2Q9NRR3 84 aa5.55□□□□□ -1.52
ATP2C1-208ENST00000504948 APCP25054 2843 aa5.55□□□□□ -1.52
ATP2C1-208ENST00000504948 LITAFQ99732 161 aa5.55□□□□□ -1.52
ATP2C1-208ENST00000504948 RPL37AP8A6NKH3 93 aa5.54□□□□□ -1.52
ATP2C1-208ENST00000504948 CHCHD10Q8WYQ3 142 aaPredicted RBP5.54□□□□□ -1.52
ATP2C1-208ENST00000504948 Q96MF0 132 aa5.54□□□□□ -1.52
ATP2C1-208ENST00000504948 Q6ZVQ6 151 aa5.54□□□□□ -1.52
ATP2C1-208ENST00000504948 Q8N6K4 173 aa5.54□□□□□ -1.52
ATP2C1-208ENST00000504948 C11orf72Q8NBR9 251 aa5.54□□□□□ -1.52
ATP2C1-208ENST00000504948 CSMD2Q7Z408 3487 aa5.54□□□□□ -1.52
ATP2C1-208ENST00000504948 DNAH3Q8TD57 4116 aa5.54□□□□□ -1.52
ATP2C1-208ENST00000504948 CCL24O00175 119 aa5.53□□□□□ -1.52
ATP2C1-208ENST00000504948 TMEM254Q8TBM7 123 aa5.53□□□□□ -1.52
ATP2C1-208ENST00000504948 LINC01547P58512 204 aaPredicted RBP5.53□□□□□ -1.52
ATP2C1-208ENST00000504948 IGKV2-24A0A0C4DH68 120 aa5.53□□□□□ -1.52
ATP2C1-208ENST00000504948 Q8N814 137 aa5.53□□□□□ -1.52
ATP2C1-208ENST00000504948 STAB1Q9NY15 2570 aa5.53□□□□□ -1.52
ATP2C1-208ENST00000504948 ZNF575Q86XF7 245 aa5.53□□□□□ -1.52
ATP2C1-208ENST00000504948 TRAV7A0A075B6U4 112 aa5.52□□□□□ -1.53
ATP2C1-208ENST00000504948 COX7BP24311 80 aa5.52□□□□□ -1.53
ATP2C1-208ENST00000504948 IBA57-AS1B1ANH7 110 aa5.52□□□□□ -1.53
ATP2C1-208ENST00000504948 REG3AQ06141 175 aa5.52□□□□□ -1.53
ATP2C1-208ENST00000504948 TRBV6-8A0A0A6YYG3 113 aa5.51□□□□□ -1.53
ATP2C1-208ENST00000504948 H0Y9J4 135 aa5.51□□□□□ -1.53
ATP2C1-208ENST00000504948 OXTP01178 125 aa5.51□□□□□ -1.53
ATP2C1-208ENST00000504948 LINC01006Q8NI28 216 aa5.51□□□□□ -1.53
ATP2C1-208ENST00000504948 LINC00959A0A1B0GUT2 108 aa5.51□□□□□ -1.53
ATP2C1-208ENST00000504948 ETDCA0A1B0GVM5 59 aa5.51□□□□□ -1.53
ATP2C1-208ENST00000504948 COX8CQ7Z4L0 72 aa5.51□□□□□ -1.53
ATP2C1-208ENST00000504948 TRBV10-3A0A0K0K1G6 114 aa5.51□□□□□ -1.53
ATP2C1-208ENST00000504948 M0R2N4 97 aa5.51□□□□□ -1.53
ATP2C1-208ENST00000504948 ZFHX3Q15911 3703 aa5.5□□□□□ -1.53
ATP2C1-208ENST00000504948 HRNRQ86YZ3 2850 aaPredicted RBP5.5□□□□□ -1.53
ATP2C1-208ENST00000504948 TRBV6-4A0A1B0GX49 114 aa5.5□□□□□ -1.53
ATP2C1-208ENST00000504948 PRR15LQ9BU68 103 aa5.5□□□□□ -1.53
ATP2C1-208ENST00000504948 LINC00575Q6W349 94 aa5.5□□□□□ -1.53
ATP2C1-208ENST00000504948 LINC00208Q96KT6 92 aa5.5□□□□□ -1.53
ATP2C1-208ENST00000504948 MP68P56378 58 aa5.5□□□□□ -1.53
ATP2C1-208ENST00000504948 FAM222AQ5U5X8 452 aa5.5□□□□□ -1.53
ATP2C1-208ENST00000504948 A6NDX4 124 aa5.49□□□□□ -1.53
ATP2C1-208ENST00000504948 K7EMT4 169 aa5.49□□□□□ -1.53
ATP2C1-208ENST00000504948 PRYO14603 147 aa5.49□□□□□ -1.53
ATP2C1-208ENST00000504948 PCOTHQ58A44 107 aa5.49□□□□□ -1.53
ATP2C1-208ENST00000504948 LINC01356Q8N9X3 169 aa5.49□□□□□ -1.53
ATP2C1-208ENST00000504948 LINC01546A6NGU7 62 aa5.48□□□□□ -1.53
ATP2C1-208ENST00000504948 CYSRT1A8MQ03 144 aa5.48□□□□□ -1.53
ATP2C1-208ENST00000504948 NIPBLQ6KC79 2804 aaeCLIP5.48□□□□□ -1.53
ATP2C1-208ENST00000504948 A0A0G2JQZ4 141 aa5.47□□□□□ -1.53
ATP2C1-208ENST00000504948 A0A1W2PNN7 141 aa5.47□□□□□ -1.53
ATP2C1-208ENST00000504948 DEFB114Q30KQ6 69 aa5.47□□□□□ -1.53
ATP2C1-208ENST00000504948 OTOGQ6ZRI0 2925 aa5.47□□□□□ -1.53
ATP2C1-208ENST00000504948 ESRGQ1W209 222 aa5.47□□□□□ -1.53
ATP2C1-208ENST00000504948 ATP5EP2Q5VTU8 51 aa5.46□□□□□ -1.53
ATP2C1-208ENST00000504948 ODF3L2Q3SX64 289 aa5.46□□□□□ -1.54
ATP2C1-208ENST00000504948 SMIM29Q86T20 159 aa5.46□□□□□ -1.54
ATP2C1-208ENST00000504948 A8MUN3 132 aa5.46□□□□□ -1.54
ATP2C1-208ENST00000504948 IGKV4-1P06312 121 aa5.46□□□□□ -1.54
ATP2C1-208ENST00000504948 RPS28P62857 69 aaKnown RBP5.46□□□□□ -1.54
ATP2C1-208ENST00000504948 C10orf25Q5T742 122 aa5.45□□□□□ -1.54
ATP2C1-208ENST00000504948 C16orf74Q96GX8 76 aa5.45□□□□□ -1.54
ATP2C1-208ENST00000504948 PSCAO43653 123 aa5.45□□□□□ -1.54
ATP2C1-208ENST00000504948 MUC7Q8TAX7 377 aa5.45□□□□□ -1.54
ATP2C1-208ENST00000504948 ZNF73O43830 326 aaPredicted RBP5.45□□□□□ -1.54
ATP2C1-208ENST00000504948 H3BUA1 57 aa5.44□□□□□ -1.54
ATP2C1-208ENST00000504948 DEFB121Q5J5C9 76 aa5.44□□□□□ -1.54
ATP2C1-208ENST00000504948 TMEM89A2RUT3 159 aa5.44□□□□□ -1.54
ATP2C1-208ENST00000504948 H7BZZ5 65 aa5.44□□□□□ -1.54
ATP2C1-208ENST00000504948 FSHBP01225 129 aa5.44□□□□□ -1.54
ATP2C1-208ENST00000504948 PRO0255Q9UI72 69 aa5.44□□□□□ -1.54
ATP2C1-208ENST00000504948 CDK2AP2O75956 126 aa5.43□□□□□ -1.54
ATP2C1-208ENST00000504948 SPATA3Q8NHX4 192 aa5.43□□□□□ -1.54
ATP2C1-208ENST00000504948 SETXQ7Z333 2677 aaKnown RBP5.43□□□□□ -1.54
ATP2C1-208ENST00000504948 IGLV5-39A0A0G2JS06 123 aa5.43□□□□□ -1.54
ATP2C1-208ENST00000504948 Q5XG85 94 aa5.42□□□□□ -1.54
ATP2C1-208ENST00000504948 IGLV2-33A0A075B6J2 118 aaPredicted RBP5.42□□□□□ -1.54
ATP2C1-208ENST00000504948 SPINK6Q6UWN8 80 aa5.42□□□□□ -1.54
ATP2C1-208ENST00000504948 IGHV3OR16-9A0A0B4J2B5 98 aa5.41□□□□□ -1.54
ATP2C1-208ENST00000504948 FAM229BQ4G0N7 80 aa5.4□□□□□ -1.54
ATP2C1-208ENST00000504948 C11orf71Q6IPW1 123 aa5.4□□□□□ -1.54
ATP2C1-208ENST00000504948 FLG2Q5D862 2391 aaPredicted RBP5.4□□□□□ -1.54
ATP2C1-208ENST00000504948 IGLV1-40P01703 118 aa5.4□□□□□ -1.54
ATP2C1-208ENST00000504948 KRTAP21-3Q3LHN1 58 aa5.4□□□□□ -1.54
ATP2C1-208ENST00000504948 NDUFC1O43677 76 aa5.4□□□□□ -1.55
ATP2C1-208ENST00000504948 RETNLBQ9BQ08 111 aa5.4□□□□□ -1.55
ATP2C1-208ENST00000504948 STAB2Q8WWQ8 2551 aa5.39□□□□□ -1.55
ATP2C1-208ENST00000504948 SPAG11AQ6PDA7 123 aa5.38□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms